cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK065589     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os01g0206700 ( IRGSP 1.0 )
RAP - Chromosome No. 1
RAP - Location, Length 5,808,589 -  5,810,510  ( - );   1,922(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 5,808,589 -  5,810,510 ( - );   1,922 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI		 UniProt
Accession No		 UniProt Entry
Name
Os01g0206700 Os01t0206700-01 200963 J013031K24 912 LOC_Os01g10890.1 AK065589 36513 AP008207.2 255672756 BAF04259.1 113531876 NC_008394.4 297598437 NM_001048880.1 115435173 NP_001042345.1 115435174 Q9LWM4 CIPK5_ORYSJ


Chromosome: 1 ,  position: 5,808,589 - 5,810,510 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 acaaacacct ggcctatttt taggcatcct cttccatctc cagagaagtg agccccagcc 
000061 tcatgtcaca agggaagcac tagccaccat agaactctct ctctttttct ccttcctcct 
000121 aggaggatcc caaatacacc aatcgtgtct tggattttcc caaacacagc gcgcactctc 
000181 gcccttcacc tctcctccct ctcacccttc cattacatgg atcagggagg gaggaaggag 
000241 gcctgaagtg gcgcagagta ggcgcttgta aacaaatccc cccatttgct tcttttgcac 
000301 tgaagaatcc ctgaagaatc cagcaggatg gagaagaagg cgtccatcct catgaaccgg 
000361 tatgagctcg gccgcatgct cgggcaaggc accttcgcca aggtgtacca tgcacggaac 
000421 cttgcatcca accagagcgt cgccatcaag gtcattgaca aggaaaaggt attgcgtgtc 
000481 ggcatgattg accagatcaa gcgagagatc tccatcatgc gcctcgttcg ccaccccaac 
000541 atcgtccagc tgcacgaggt catggccagc aagagcaaga tatactttgc aatggagtat 
000601 gtccggggtg gtgagctctt cagcagggta gccagggggc gactcaagga ggatgctgcg 
000661 aggaagtact tccagcagtt gataggggct gtggacttct gtcacagccg cggtgtctac 
000721 caccgagacc tcaagccaga gaacctcctc gtcgacgaga atggcaacct caaagtgtcg 
000781 gactttgggc tgagcgcctt caaggagtgt cagaagcagg acgggctgct ccacacgacg 
000841 tgtggcacac ctgcatatgt tgcaccagag ataatcaata agaggggcta tgatggagca 
000901 aaagcagaca tatggtcttg cggtgtcata ctctttgttc tgcttgctgg ctacctccca 
000961 ttccatgact caaatctaat ggagatgtac cggaagataa gcaaaggtga tgtcaagttc 
001021 ccacagtggt tcactactga tgtccgaagg cttctgtcca ggctgcttga tccaaatcca 
001081 aacattagga tcaccgttga gaagctagtt gagcatccat ggttcaagaa ggggtacaaa 
001141 ccagcagtga tgctatcaca gccaaatgaa tcaaacaacc tcaaggatgt ccatactgct 
001201 ttcagtgctg atcacaagga caatgaaggc aaggcaaaag aaccagcaag ctctttgaag 
001261 ccagtgagct tgaatgcatt tgacatcatc tccctctcca aaggatttga tctgtcaggc 
001321 ctgtttgaga acgacaaaga gcagaaggca gactcacggt tcatgacaca aaaaccagca 
001381 tcagcaatag tgtcaaagct agagcagatt gctgagacag agagcttcaa ggtgaagaag 
001441 caggatggac tggtgaagct ccagggatcc aaagaaggga ggaaagggca gctcgcgatc 
001501 gatgcagaga tctttgaagt gacaccatcc ttctttgttg ttgaggtgaa gaagtctgca 
001561 ggggacacgt tggagtacga aaaattctgc aacaagggcc taagaccttc tctcagggac 
001621 atctgctggg atggtcagtc agagcatcca tcactggcac agtcatcaac tctgactcag 
001681 tcctctaagt caatctcgag acatgccatt taagtgcaac ctcataagag atgcagtaac 
001741 aatccatttt cctctctcct tttccctttc atcaaagtgc tgagcctgag agtattctca 
001801 cttgagcatc aggcttaggg ctctttgatg ataatttttg ccagttttcc ttgtatagta 
001861 gcagtttgtc tacatggatc tcctgttctt tcaccaatag aaacagggag attgacaaca 
001921 gc

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
AV834756 bah15c09 507
more... (Total Hit Count: 10 )
Hit Wheat ESTs
Acc. No. Clone Name Length
BJ247188 whf28a03 580
more... (Total Hit Count: 10 )
/rice/oryzabase