cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
|
General information
|
|
RAP - Accession No.
|
AK063766
Link to RAP-DB
(
IRGSP 1.0
)
|
|
RAP ID
|
Os03g0758100
(
IRGSP 1.0
)
|
|
RAP - Chromosome No.
|
3
|
|
RAP - Location, Length
|
32,230,546 -
32,236,322
( - );
5,777(bp)
|
|
Exon (Data source : RAP-DB)
|
|
Exon 1
|
Location |
32,230,546 -
32,231,025
( - );
480 (bp)
|
|
Exon 2
|
Location |
32,231,612 -
32,231,812
( - );
201 (bp)
|
|
Exon 3
|
Location |
32,231,944 -
32,232,130
( - );
187 (bp)
|
|
Exon 4
|
Location |
32,232,251 -
32,232,327
( - );
77 (bp)
|
|
Exon 5
|
Location |
32,232,650 -
32,232,886
( - );
237 (bp)
|
|
Exon 6
|
Location |
32,232,959 -
32,233,087
( - );
129 (bp)
|
|
Exon 7
|
Location |
32,233,239 -
32,233,391
( - );
153 (bp)
|
|
Exon 8
|
Location |
32,233,501 -
32,233,956
( - );
456 (bp)
|
|
Exon 9
|
Location |
32,234,034 -
32,234,151
( - );
118 (bp)
|
|
Exon 10
|
Location |
32,234,297 -
32,234,568
( - );
272 (bp)
|
|
Exon 11
|
Location |
32,235,052 -
32,235,327
( - );
276 (bp)
|
|
Exon 12
|
Location |
32,235,436 -
32,235,612
( - );
177 (bp)
|
|
Exon 13
|
Location |
32,235,952 -
32,236,053
( - );
102 (bp)
|
|
Exon 14
|
Location |
32,236,139 -
32,236,322
( - );
184 (bp)
|
Chromosome: 3
, position: 32,230,546
- 32,236,322
bp
|
|
|
Now loading
|
|
Sequence (Data source : RAP-DB)
|
Nucleotide
Fasta Format
|
000001 cattaagcac catgcggagt tcacaccagt attctctcca gagcactttt cacctctgaa
000061 ggcttaccat gcaactgcta aaagtgttct tgatactctg ataatgaact ggaatgcaac
000121 atatgactat tacgacagaa caaatgtgaa gcaagcgtat tacctgtcca tggagttttt
000181 acaggtctca tatgctgctt cctcaagcct catctattac ctttcagtga atacattgca
000241 tcttatttgg ttgttctttt gtattgtagg gaagagctct cactaatgcc gttggtaacc
000301 ttgagctaac tggacaatac gcagaagcac tacaacaact tggacacagc ctagaggatg
000361 ttgctaccca ggtaagaaat ttctagaaga ggattgggat ctttgtccat atataaaaaa
000421 agaccagcag gaaaattgtc catatcaaat ttgtttcatg caatttatta tttaaatgca
000481 tgaaaagtgg cattttttat taattcattt ccttcccttt gttctgaaac tatctacaaa
000541 ggaaaagctc gtttcctacc atgattcacc acctaactta tattcttcat gtagctatca
000601 gattaagtga ctatatttaa tttcaccaat agcttattga ttcatagagt tccctttatt
000661 ttagaaatat taagattgga tatgctactt ttgtaattgc aatcaagtag gagccagatg
000721 ctgcccttgg gaatggtggt ctaggccggt tagcttcctg tttcttggat tctctggcaa
000781 ccctaaatta tccagcatgg ggatatggac ttcgatacaa acatggcctc tttaaagcaa
000841 atcatacgaa ggatggtcag gaggaggtag ctgaaaattg gctcgaggta ctgatatgcc
000901 ctttcatttt ttgctgcttg aaatccagaa ttttgattat gttgatatac tgattatagc
000961 agctaaccat ttatgacttc atacttatct tccagatggg aaatccttgg gagattgtaa
001021 gaaccgatgt ctcctatcct gtgaagttct atggtaaagt ggttgaaggc actgatggga
001081 ggatgcactg gattggagga gaaaatatca aggttgttgc tcatgatatc cctattcctg
001141 gctacaagac taaaactacc aacaatcttc gtctttggtc aacaacagtg ccatcacaag
001201 atttcgattt ggaagctttt aatgctggag atcatgcaag tgcatatgaa gctcatctaa
001261 atgctgaaaa ggtattattt tcccatgtta tccttttcag cacaaagcat aactcttcgt
001321 cagactattt gaaaggctaa aagatatctc atgcacccaa caacattttg atttgattca
001381 cacaattgtt taagaactat tcaatcaaat cacagagagt aaatccatgt atattgctcc
001441 tctgaatcaa tagatcgaga ctgatgggat atggtcgcat ccactaggct agttagcaca
001501 tgttcttttc tcttgaaaat agttagcaca tggtgaaatg gcttttgaag tggaagcccc
001561 atacctcaag gcatgtgaat tgtatttatt accgcattct tatttgtgtc attcattctc
001621 aattatggtt tattttgtgt attgggtttt gtgccacatt atgaactagt attgctcatt
001681 gccatcactg tggtcaaact tgatgagtta tttaatctct taagttttat tcgcttgttt
001741 tctcatcata ccagatatgt cacgtactga atcctgggga cgaatcacca gagggaaagt
001801 tcttcgcctg aagcaacaat atacattatg ctcagcctca ctacagggat attattgctc
001861 gtttcgagag gagagctggt gattctctca gctgggagga cttcccctct aaagttgcag
001921 tgcagatgaa tgacactcac ccaacactgt gcattcctga gttgatgaga atattgattg
001981 atgttaaagg gttaagctgg aatgaggctt ggagtatcac agaaaggtat tcaccaccaa
002041 attagctaat cttgaaacct attagagtct gcagctttat gtgttcagtg ttccaccagt
002101 ccaaatagcc ttaatttact tcctcattta tcctccatta aatgttgtac taattttgaa
002161 atattttcca gaactgtggc atacacaaac cacacggtgc ttcctgaagc tctggagaag
002221 tggagcttgg acataatgca gaaacttctt cctcggcatg ttgaaatcat agaaaaaatt
002281 gatggggagg taccacatgt gcacaaaact tacacagtta gcttcatgct ctgtagaccc
002341 acttatgttt tcttgttttg aaacagctga tgaacatcat tatctcaaaa tacggaacag
002401 aagatacttc actgttaaaa aagaagatta aagaaatgag aatcttagac aacattgacc
002461 taccagattc tattgccaaa ctatttgtga aaccaaaaga gaaaaaagaa tctcctgcta
002521 aattgaaaga gaaattgctt gtcaaatctc tggagcctag tgttgtggtt gaggagaaaa
002581 ctgtgtccaa agtagagata aacgaggact ctgaggaggt ggaggtagac tctgaagaag
002641 ttgtggaggc agaaaacgag gactctgagg atgagttaga tccatttgta aaatcagatc
002701 ctaaattacc tagagttgtc cgaatggcta acctttgtgt tgttggtggg cattcggtta
002761 atggtgtggc tgcgattcac agcgagattg tgaaagaaga tgtattcaac agcttttatg
002821 aggtatttac atggcgttat ttggaattgg gatacttttt tttcatttat ttccctgctt
002881 ctataatcat ccaattatat gacattcacc atcttcccat tttgctgaca gatgtggccc
002941 gctaaatttc aaaataaaac aaatggagtg actcctagac gttggattcg gttttgtaat
003001 cctgaattaa gtgcaatcat ttcaaaatgg ataggatctg atgattgggt tttgaacact
003061 gataaacttg ctgaattaaa gaaggtactt ctagacattc agttatatct gtttgcaatt
003121 ttaagtgatg caccttttta aataattcct tcactccatt gttacctatt ccttactttt
003181 atatatttct gttaattcat cttgctattt tttgctgata ttcatcctgc tacagtttgc
003241 tgatgatgag gatctgcaat cagaatggcg tgctgctaaa aaggctaaca aggtgaaggt
003301 tgtttctctc ataagagaaa aaacaggata tatcgtcagt ccagatgcaa tgtttgacgt
003361 tcaggtatat ttaataggaa gcattttcat tctatcatgt attggttcac ttagtttttg
003421 tcacctggat tcacaggtga aaaggatcca tgagtataag cgacagctgc taaatatcct
003481 tggaattgtc taccgctaca agaagatgaa agaaatgagt gcaaaagaca gaataaatag
003541 ctttgttcca agggtatgca tatttggtgg gaaagcattt gccacttacg tacaggcaaa
003601 gaggatagtg aagtttatta cagatgttgc agctactgta aatcatgatc cagaaattgg
003661 agatctattg aaggtattgt ttttctctct ttaaattcac ctgtcatctt cattttcatc
003721 tgtgtcatag aaatatggct ttgactaata acccagctgc caaaggcatc caattgtttg
003781 attatctatg gacatttttt ttccctgatc tcaacgatat aaatttggca cttttatcta
003841 tgggcccata acagaggtcg taccgtcgta gtatatccat gaatttgatt ctatttgttt
003901 ttcttatact atagaaataa gcatcagtat tgaaaactca gtaatttcct tatgctgcaa
003961 tcagagaact aactgtgata tgcttttttg tcaaggttgt atttattcca gattataatg
004021 ttagtgttgc tgaggcgcta atccctgcca gtgaattgtc tcagcatatc aggtaataat
004081 ctggctacat ttcagtctac agattcacag aaaaactctc ctgcctatta gaatgtagag
004141 tttttgccag actgccaact gtaagtgttt ctacaaattt aatttcacgc agtactgctg
004201 gaatggaagc tagtggaacc agcaacatga agtttgcaat gaatggatgt atccttattg
004261 gaactttgga tggtgctaat gtggaaatca gagaggaggt tggagaggaa aactttttcc
004321 tttttggtgc tgaggcacat gaaattgctg gtttaaggaa agagagagcc cagggaaagg
004381 tatcactcgt tttctttgga tcatcatatc actcttggtc atgcagtcgc ttatgatcaa
004441 ctcacaaaga tagcatgagc cagagtagta caagcaacgt tatgaccatg tcattttctt
004501 tcacttgtag tttgtgcctg acccaagatt cgaagaggtt aagagatttg tccgcagtgg
004561 ggtctttgga acttacaact acgatgactt gatgggttct ctggaaggaa atgaaggtta
004621 tgggcgtgca gactattttc ttgttggtaa agatttcccc agctacattg aatgccagga
004681 gaaggttgat aaagcatacc gcgatcagaa agtaagtcct cttctttttg cgcactgcat
004741 gtgactatta cataaacttc ttgttttgtg aatttgtgtc ttatgttctc aaaccggtgt
004801 tttattacta taaacatgaa ttaacaaatt ccataagcat ggatgtgatg aaagagcaat
004861 gtaaactgtc agaaaatagt gtcgctggtt atgttctctt tctatgcata gaccattaga
004921 cctgctgtta ggctctttca tgtacatagc tggccattca cttcaggcaa gtgctcctat
004981 gctccctaaa aacctaaaaa aaaataacca agcaatttat gggaatgttg gggctaattc
005041 tctagcaccg aatgaatgtt ttgaaatccg caatttcatt tctggtataa acataaaatg
005101 cactgctctg ttagtttctt ctctcccatt ttccctgctt ggcactacat ttcctcaaga
005161 catatcagat catcatagtt ttcatacatt cacattatag catcttctat tccgattgca
005221 gttaacattg tcaataacac atggggaact caaattgtct atcctttcta ctcacatatc
005281 catctctcta cctgcagcta tggacaagga tgtcaatcct caacacagcc agttcctcca
005341 agttcaacag cgaccggacg attcacgagt acgccaagga catctgggac atcaagcctg
005401 tcatcctgcc ctagacaggc aaggcaagca ctagccactc cctgccagcg accttcagag
005461 ctaaggtgcg cgcaaccggt gatgcgatga cagcatctgc ctcccagctc tccttggcag
005521 gaaggtttcg ctttgctccc agttttgagt agacagaagc aagttcagtt caggcttcga
005581 taaaacgctg gaactatgca aattgtagcc gtgttgccta gcctggaaca cccttgtttt
005641 acctgtaatg tgtagcagcc tctgctgatc agctcatgtg ctatatggaa ttctgaagtg
005701 aaaccatagt taaaagggat cggttagtgg catcctttac aatctccgag atgtgctata
005761 tggaattctg cattgat
|
Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
Update info.
