cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK061017     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os03g0856700 ( IRGSP 1.0 )
RAP - Chromosome No. 3
RAP - Location, Length 37,049,212 -  37,050,707  ( + ) ;   1,496(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 37,049,212 -  37,050,707 ( + ) ;   1,496 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 UniProt
Accession No		 UniProt Entry
Name
Os03g0856700 Os03t0856700-01 006204B11 103405 006204B11 5013 LOC_Os03g63970.1 AK061017 15588 P93771 GAOX1_ORYSJ


Chromosome: 3 ,  position: 37,049,212 - 37,050,707 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 gatgccgtga tcgatcgatc gatctgttgg cgcagcgtgt atataagggc gggaagggga 
000061 gtgagagaga gcagcagcta gctagccgcg gtcggtcgat ccagctgctg gggatgagta 
000121 cttagttagc tcggagctag ctactaatgg atgatatact tatgctagtt agttaaatac 
000181 agttattagt tagttgtagg ttgcatctat catatctcca tcggttaatt aattgattga 
000241 tagctagatt atcaacaatt aatgagcatg gtggtgcagc aggagcagga ggtggtgttc 
000301 gacgcggcgg tgctgagcgg gcagacggag atcccgtcgc agttcatatg gccggcggag 
000361 gagagccccg ggtcggtggc ggtggaggag ctggaggtgg cgctgatcga cgtgggggcg 
000421 ggggcggaga ggtcgtcggt ggtccggcag gtgggggagg cgtgcgagag gcacggcttc 
000481 ttcctggtgg ttaaccacgg catcgaggcg gcgctgctgg aggaggcgca ccggtgcatg 
000541 gacgccttct tcacgctgcc gctgggggag aagcagcggg cgcagcggcg cgcgggggag 
000601 agctgcggct acgccagcag cttcacgggg cgcttcgcgt ccaagctgcc gtggaaggag 
000661 acgctgtcgt tccggtactc atcggctgga gatgaagagg gcgaggaggg cgtgggtgag 
000721 tacctggtgc ggaagctcgg ggcggagcac gggcggcggc tgggcgaggt gtactcgcgc 
000781 tactgccacg agatgagccg cctgtcgctg gagctgatgg aggtgctcgg ggagagcctg 
000841 ggcatcgtcg gagaccggcg ccactacttc cggcgattct tccagcgcaa cgactccatc 
000901 atgcgcctca actactaccc ggcgtgccag aggccactcg acacgctggg caccggtccg 
000961 cactgcgacc ccacctcgct caccatcctc caccaggacc acgtcggcgg cctggaggtg 
001021 tgggcggagg ggcggtggcg cgccatccgc cctcgccccg gggcgctcgt cgtcaacgtc 
001081 ggcgacacct tcatggcgct ctccaacgcc aggtaccgca gctgcctgca ccgggcggtc 
001141 gtcaacagca cggcgcctcg ccgctcgctg gccttcttcc tctgcccgga gatggacacg 
001201 gtggtgcgcc cgccggagga gctggtcgac gaccaccacc cgagggtgta cccggacttc 
001261 acgtggcggg cgctgctgga cttcacgcag cgccactaca gggccgacat gcgcacgctt 
001321 caggccttct ccgactggct taatcatcat cgtcacctgc aaccaacaat atactcctag 
001381 ctcctagtcc tagctatata ctcctattat ccatccatcc atccatctta cactactata 
001441 ccattagcat cgatcgatca tccattaatt aattaattaa ttactagttc cggctt

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
BY845761 bart24c05 568
more... (Total Hit Count: 5 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ695048 whsc19h14 556
more... (Total Hit Count: 2 )
/rice/oryzabase