更新情報cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
| General information | |
|---|---|
| RAP - Accession No. | AK065117 Link to RAP-DB ( IRGSP 1.0 ) |
| RAP ID | Os01g0360200 ( IRGSP 1.0 ) |
| RAP - Chromosome No. | 1 |
| RAP - Location, Length | 14764190 - 14770613 ( - ); 6424(bp) |
| Exon (Data source : RAP-DB) | ||
|---|---|---|
| Exon 1 | Location | 14764190 - 14764408 ( - ); 219 (bp) |
| Exon 2 | Location | 14764492 - 14765003 ( - ); 512 (bp) |
| Exon 3 | Location | 14765139 - 14765218 ( - ); 80 (bp) |
| Exon 4 | Location | 14765397 - 14765499 ( - ); 103 (bp) |
| Exon 5 | Location | 14765592 - 14765707 ( - ); 116 (bp) |
| Exon 6 | Location | 14765888 - 14765980 ( - ); 93 (bp) |
| Exon 7 | Location | 14766089 - 14766475 ( - ); 387 (bp) |
| Exon 8 | Location | 14767490 - 14767924 ( - ); 435 (bp) |
| Exon 9 | Location | 14767998 - 14768111 ( - ); 114 (bp) |
| Exon 10 | Location | 14768205 - 14768253 ( - ); 49 (bp) |
| Exon 11 | Location | 14768484 - 14768643 ( - ); 160 (bp) |
| Exon 12 | Location | 14768741 - 14769345 ( - ); 605 (bp) |
| Exon 13 | Location | 14770292 - 14770613 ( - ); 322 (bp) |
| Related Rice IDs | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| RAP Locus | RAP ID | KOME Clone ID |
KOME Clone Name |
KOME Cluster ID |
MSU ID | cDNA Accession No |
RiceXpro FeatureNum |
UniProt Accession No |
UniProt Entry Name |
| Os01g0360200 | Os01t0360200-01 | 200428 | J013001O12 | 413 | LOC_Os01g25820.1 | AK065117 | 5811 | Q5ZAJ0 | RBOHB_ORYSJ |
| Os01g0360200 | Os01t0360200-01 | 200428 | J013001O12 | 413 | LOC_Os01g25820.2 | AK065117 | 5811 | Q5ZAJ0 | RBOHB_ORYSJ |
Chromosome: 1 , position: 14,764,190 - 14,770,613 bp |
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| Sequence (Data source : RAP-DB) | |
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Nucleotide
Fasta Format |
000001 actactacca ttgccaagcc aggccaggcc agaccggcca tctgcattgc atttgctctc 000061 tctctctctc tctctctctc ggcaccacgg acactcgtac agctgccgcc tgccggaggg 000121 ttggtggtgt gtttcaggtt ccagaaaaat cctccagctt tttgtggtcg cttgaggagc 000181 tgagctgtgt gagccttgca aggtttgcat caacaagctt gggggttttt cctatcttgt 000241 tgttctgagg gaattcaaga aatgctccaa atggtctgaa ttcgtaggtt tatttgggct 000301 ggaatctctc agagggttta aggtaccgtt cctttcgtca cttcccccaa agttttagcc 000361 tgcaaagttt gttcttcttc ttcttcttct tcttcttctt cttcttcttc ttttttccct 000421 cttgctctgt gtctgattct tcctttccct tttcgttttg tttctccact tgtgaataag 000481 cttttgtttt ttttacattc agtagtaccc actcactagt agaaatgttc ctctgtttct 000541 tctccactac tgttggacat gtttgcttgc tgtttgtggg ttgtggcacc aagaaacgga 000601 tggttgattg agggggtggg tgttggtgtg ttcctgcatt ttcttggaag cagcagcttc 000661 cagatctgag atggcagagg tattttgcgg ctcatggttt gagttccatt tcgagtgaat 000721 tcgttcattc cttccttcag tttcttggtt tatttttgag gggtagtttc ttggtttatc 000781 ttggggcagt tttaaagttt tcccctcttt tattagctaa tgctgctgaa gctgtacatc 000841 cctggaggct atcttctcca tatttaatgg attggtagta tcttagattc ctagtttatt 000901 ggattttctc tctcccgaat tttgggtttt ggaatagatg ttctggatct catagacttc 000961 aagagaggca gttctgctat ttaaattgct atttctttct tcagttatat atttttttct 001021 gtacctagac tgcagataat tttggtctga gtgtctctta aaaaaaagga gataattttg 001081 gtctgaatga acagtgaagt gttttatttc actgattttt gtccgtatca ctatattagt 001141 agttattttc atttttgccc agacttcacc tttttctttt ttgttgttgt gctaaaagac 001201 caaattatca ctttcaatca ctgaagttca tctttccttg gttgctaact aaattatccg 001261 ttgatcagag gaaaaaggaa agaggagaaa ttgtaaggac aagtagagaa gaacatggct 001321 gacctggaag caggcatggt tgctgctgcc acagaccagg gcaattcaac aaggtcacaa 001381 gatgacgcag ccacactgat cccgaacagt ggcaatctgg gctcgagcaa caggagcacc 001441 aagacggcca ggttcaagga cgacgacgag ctggtcgaga tcaccctcga cgtgcagcgc 001501 gattcggtgg caatccaaga agtgagaggg gtggatgagg gtggctccgg gcacggtacc 001561 gggttcgacg gcctgccact ggtgtcaccc tcgtcgaaga gcggaaagct gacgtcaaag 001621 ctcaggcagg tgaccaatgg gctcaagatg aagagctcca gcaggaaggc gccatccccg 001681 caggcgcagc agtctgcgaa gagggtgagg aagaggctgg acaggaccaa gagcagcgcc 001741 gccgtggcgc tcaaaggatt gcagtttgtg actgcaaagg ttggcaatga cggctgggcc 001801 gcggtggaga agcggttcaa tcagctgcag gtggatggtg tgctgctccg ttcaagattt 001861 gggaaatgca ttggtaaatt ttttttttca gaagttgagc tgaatttgaa ttgttcatac 001921 atctgttagg agaaatggtg tttattccat tatttggatt gattgtgcag gaatggatgg 001981 gtccgacgag tttgcggtgc aaatgttcga ttctctggcg aggaagagag ggatagtgaa 002041 gcaggtgctc actaaggacg agctcaaaga tttctatgag caattgactg atcaggggtt 002101 tgacaatcgt cttcggacat tctttgacat gttagtactc tctgaaaaca cttctagtgt 002161 tgtcatgttt cctttctgta ctattatagg cataaatata tttcatgtgg ttaatttgcc 002221 aaatcaaatt tccaccacag agtagctcaa tatcttgcat agaattcaag caagtgagcg 002281 acaagctttt catgcttctg ttttgctaac tgctaagcta ttcattgtag cacttaacaa 002341 tgttcattct tgttgtgcag ggttgacaag aacgctgatg gaaggctcac agcagaagag 002401 gttaaggagg taagtcagaa aacacaaaac cgaaaaaaaa tataacaatt tctatatgtt 002461 ctgtgtttaa atggtattaa atggatgatt atgcttttgc agattattgc ccttagtgca 002521 tcagcaaaca aactttccaa gatcaaggag cgagctgatg agtacacagc actcattatg 002581 gaagagcttg accctacaaa cttgggatac atcgaggttt gtccaattcc aagcatcaaa 002641 gtaatattgt gcacaaccta tgacctaacc gcattaataa ttttgacaga tggaggactt 002701 ggaagcacta ttgcttcagt caccatctga agctgctgca agatcaacaa cgacgcacag 002761 ctccaaactt agcaaagctc ttagcatgaa gcttgcgtct aacaaagaaa tgagcccagt 002821 tcgtcattac tggcagcagt tcatgtactt ccttgaagag aattggaagc gcagttgggt 002881 tatgactctg tggatctcaa tctgcattgc ccttttcatt tggaagttca ttcagtaccg 002941 taatcgagcc gtattcggca tcatgggtta ttgtgtgacc actgcaaagg gtgctgcaga 003001 gaccctcaaa ttcaacatgg ctttggtcct acttcctgtc tgcagaaata caatcacatg 003061 gattcggtca aagacacagg ttggagctgt tgtacccttc aacgacaata taaactttca 003121 taaggtaaaa ttatgttgat tcaatcaata ttgaactgat ggattttacc gtgttgtgaa 003181 tatcatccag tccattttgc gtagtgcttt ccataatcaa gtaaagtcaa tattttttta 003241 agataatgga agctttattg aactcagcca atgacatcaa gatgatagaa ctgtactaag 003301 aacactctcg acctctgcat aactaagatg cacacagtca aaacacacca acactagaat 003361 tttttttaaa gaaaaaacta aacaaaagat aggagggatt aagggccatc aatccataga 003421 ctagatcgcc acccacgctc ctaagtaaaa aaaccccctc gctacctgct ccaattgtga 003481 catgccacag caataaaatt atgcagaccc gacttccgaa gaatatccca agaacggagc 003541 caatgagtaa tcaaagagat aacctggaaa ggagagtcaa tctttatgtt atcaaaaacc 003601 acatcattac tgcctagcca caatgaccag catatagcag ccgctcctaa taggactaaa 003661 ggtctcaaat atttagataa acacgaaagc aaactcgcaa acatatgtga aacactatgg 003721 gggcagacat aggtttgaaa ctatttggat taaagaccaa atagaatgag caagacgaca 003781 ttggaagagt aaatgtttaa tcatctcttc tttatgacaa aagcagcata tcttgctacc 003841 ttgctaatta cacttggcaa gattatcctt tgttagtact acacgtctac accacggcgt 003901 aagcaccaaa gaaagatctt gacttttaga ggacccttta aattctaaag tcgtttattt 003961 agtaacatat gagtaacaca ttaaacctgt tcatctggta cattttttca ataatggaaa 004021 ttagcatatc ctctacatca aaaaatgtgt ccggccatat agttgagaac taggcaaaaa 004081 aatatgagtt gtgagactaa tatcgacttt acataatcta tgatttacta ctgtgcaggt 004141 catagccgca ggtgttgcag ttggtgttgc tttgcatgca ggtgctcatc tgacatgtga 004201 ttttccccgg ctgctccatg cgagtgatgc acaatatgaa ctaatgaagc ccttctttgg 004261 ggagaagagg ccaccaaatt actggtggtt tgtaaaggga actgaaggct ggacaggtgt 004321 ggtcatggtg gtgctcatgg caatagcatt tacattagcc caaccatggt tccgacgtaa 004381 caagctcaag gactccaatc ccctcaaaaa aatgactggc ttcaatgcct tctggtttac 004441 ccaccacctg tttgtcattg tgtacacttt gctctttgtc catggaacgt gcttgtatct 004501 aagcaggaaa tggtacaaga agacggtaaa agtctatacc ctgaacacac aagaaatccc 004561 aatgatcata gttggtacct tctttgtgag gagatcataa ctgatactta tggttcattt 004621 ttatcatttt cagacatgga tgtacctcgc tgttcctgtt gtcctgtatg taagtgagcg 004681 tattcttcgg ttgtttagga gccatgatgc agttgggatt cagaaggtac catcaatcaa 004741 atctctttcc tcaacttaca tattactact atccatcgcc atccacatct ttcctttttt 004801 tatgttgtat tttatttaaa gggtttgaac tgaaactagc cttggaatgt ctggaagctc 004861 tgaatccgtc tttttttttt gggtttaaca tctctgcttt caacaggttg cagtgtatcc 004921 cgggaatgta ttggctcttt atatgtcgaa gccacctggt ttcagatacc gtagtgggca 004981 gtacatcttc ataaaatgca ctgctgtgtc tccatatgaa tggtgctggt cttacacatt 005041 ttatggaaag aaaatgtatt attttgaaat aaagtccgca gataactaaa agagcaatac 005101 tttgtctgtt acaggcatcc attttccata acatcagcac ctggagatga ttatcttagt 005161 gttcatattc gcacaagggg tgattggact tcacggctta gaactgtttt ctctgaggta 005221 attgaaccaa ctgcctttta ttttttttgc tttgttctat agataaactc ctaagaaaca 005281 tgacttacga actttgtaag cacctgaatt gcattgtctt tcatttgtca tatccaattt 005341 atctgcttga tggattcaat cgacaacaag tatgataaca aaatctttga accaggcatg 005401 ccgacccccc actgagggag aaagtggact acttagagct gacctttcca agggaataac 005461 ggacgaaaaa gcaaggtgca aaggacttca tttgatttgt ttgcgaaaag cagaaatgca 005521 ttatatatct tgcttcatct catggtagga ctttccgtta tctaaagaaa aatcttccgt 005581 ctaacgataa ttctgcttta catgcactag attcccaaaa cttttggtcg atggaccgta 005641 tggtgcaccg gcacaagatt accgtgaata cgatgtgcta cttctcatcg ggctgggcat 005701 cggagccacc cctttgatta gcattgtgaa ggacgtgctt aaccacattc aaggtgaggg 005761 atcagttgga accacggagc cggagagcag cagcaaggcg aagaagaaac ctttcatgac 005821 gaagagagcc tacttctact gggtgacgag agaggagggc tcgtttgagt ggttcagagg 005881 cgtcatgaac gaggtgtctg agaaggacaa ggatggagtc attgagctcc ataaccactg 005941 ctcaagcgtg taccaggaag gcgatgctcg ttctgctctc attgtcatgc tccaagaact 006001 tcagcatgcg aagaagggcg tcgatatctt gtcgggaact agtgtgaaga cccatttcgc 006061 acgacctaat tggcgaagcg tcttcaagaa ggttgcggtc agccatgaga accagcgcgt 006121 cggtatgttc ttcttcctgt cctttcaaat ccagtagtag gaatgtccat gatccattgc 006181 atattaaccc tgtatatttc ttcaggtgtg ttctactgtg gtgagcctgt gctggttccc 006241 caactaaggc agttgtcagc agatttcacc cacaagacaa acacaagatt tgatttccac 006301 aaggagaact tctaatggta caaattgaga aatacccgtg tatggttttg tatgtagttc 006361 tttatcatgt gaattatatg gtttctaata tatataaagt tggacaaaat aaatgaaatg 006421 atgg |
相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。
| Hit Barley ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| AK249349 | FLbaf34e14 | 3380 |
| more... (Total Hit Count: 19 ) | ||
| Hit Wheat ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| CJ682768 | whok9j10 | 806 |
| more... (Total Hit Count: 39 ) | ||
