cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK060674
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os03g0738400
(
IRGSP 1.0
)
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RAP - Chromosome No.
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3
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RAP - Location, Length
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31,110,594 -
31,115,093
( + )
;
4,500(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
31,110,594 -
31,110,728
( + )
;
135 (bp)
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Exon 2
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Location |
31,110,846 -
31,110,884
( + )
;
39 (bp)
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|
Exon 3
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Location |
31,111,001 -
31,111,087
( + )
;
87 (bp)
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Exon 4
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Location |
31,111,180 -
31,111,301
( + )
;
122 (bp)
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|
Exon 5
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Location |
31,111,442 -
31,111,518
( + )
;
77 (bp)
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Exon 6
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Location |
31,111,997 -
31,112,121
( + )
;
125 (bp)
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Exon 7
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Location |
31,112,359 -
31,112,451
( + )
;
93 (bp)
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Exon 8
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Location |
31,112,702 -
31,112,794
( + )
;
93 (bp)
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|
Exon 9
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Location |
31,112,878 -
31,113,075
( + )
;
198 (bp)
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Exon 10
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Location |
31,113,199 -
31,113,303
( + )
;
105 (bp)
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Exon 11
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Location |
31,113,397 -
31,113,462
( + )
;
66 (bp)
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Exon 12
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Location |
31,113,670 -
31,113,747
( + )
;
78 (bp)
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Exon 13
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Location |
31,114,006 -
31,114,117
( + )
;
112 (bp)
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Exon 14
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Location |
31,114,203 -
31,114,310
( + )
;
108 (bp)
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Exon 15
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Location |
31,114,452 -
31,114,626
( + )
;
175 (bp)
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Exon 16
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Location |
31,114,863 -
31,115,093
( + )
;
231 (bp)
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Chromosome: 3
, position: 31,110,594
- 31,115,093
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 gagacccccc cgcctccacc accacccgcc gctcgccgct cgcccaccat ggccatggcg
000061 acggcgctcc gcaagctctc ctccgacgcc ctccgccgcc agccgctctc ccgcatcacc
000121 ccgctctact acatggttcc gctcttcttc ctccattttt tctttaattt ttttttgttt
000181 atatcgttgc cctcttgaga aatggtgctt aatccgttcc atggattggt ttgggttcgt
000241 gcgctctcgc aggcgtccct gccggcgacg gaggagagat ccggagtcac cgtacgtgct
000301 ctctctctct ctctctctct tgactatgtg ttccgttgct cgttggtgtc tgtggtttgt
000361 tcattcgttt tttttttatt attattttgt ttgtgtgttg gatgcagtgg ccgaagcagc
000421 tgaacgcgcc gctggaggag gtggatcccg agatcgccga catcatcgag cacgagaagg
000481 cccgccaatg gaaggtaacc agcaaccacc aaaaaaaaag tgcgtggatt gttcagtgtt
000541 tggtccaccg acgcattgct gaattgtggc aatctgtttg gtgcagggtc tggagctcat
000601 cccgtcggag aacttcacct cggtgtcagt gatgcaggcg gtgggatccg tcatgaccaa
000661 caagtacagc gaggggtacc ccggcgcgag atactacggt ggaaacgagt acggttgatt
000721 gcgttctatc ggttgccttt gttcagatta tttgggtgtt aaaaatgttt aatctgaaag
000781 agaaatcagt gcctgatggg agtgaatgat gtgaatttct ggtggctctg ggttttcctt
000841 gcgtgcagat acattgatat ggccgagtca ttgtgccaga aacgtgcttt ggaggccttc
000901 cgcttggacc cagcgaaatg gggaggtaaa tcattttcac tctttatctt gccttgtcat
000961 gtttttatat gaactccagc tttcatgcgc atcaatagcc tttagtcctc ttttgtttcc
001021 tgctttgggc gatgtaaatg aaaaaaaaaa aggatagggg caaaaaggtt cctttggata
001081 agacacagtt tttatggttc catagttcac aaaaaaaaaa aaagggattt tgatcagaaa
001141 atttcttcta ggttcttaat ttacttagct tcctcactag tacaatgaaa agattacatc
001201 gtttataaac cactcggttc ttcagtaacc tgaatacaaa tggtacacga gtggtcctat
001261 tcatttatat ttttcgaatt gtttgctttc attattaacc gctttgtact taaatttatc
001321 tagaatactt attctcaaaa ttttagtttt ctttctccaa aaaggtggca ttctaacttg
001381 acaaccaatt tctacctctg cagtgaatgt gcaacctcta tcagggtcac ctgccaactt
001441 ccatgtttac actgccctat tgaaaccaca tgagagaatc atggctttgg atcttcctca
001501 tggtggacat ctttctcacg gctaccaggt acatgggtct ggacttcttc attgcctcct
001561 tactactagt tgtttcagtt ggcatgcaag cataatgctt ccttccttgt tgtctttctt
001621 tgtcctcaca agtttttcaa ttctctcatc gttactatat accaatgagt ttcttccccc
001681 tcaattctta gttatgttca gatataatgc tcttggtact ctcatcctcc catggcttag
001741 ttgttcaact tcttgatggt tgcagactga tactaagaag atttcagcag tttcgatatt
001801 ctttgagaca atgccctaca gattggatga aagcactggc ttgattgatt atgatcaggt
001861 gcaatgtcct ccttatctgt tttgttttaa tgccatttaa cttattgaat tctctatcat
001921 tcttttatag gtatgagttt tcattggaca aaacgtgttc tttttgcatc tagcagattc
001981 cacagctgaa aatatggttt caagtagcat tatctaggat atttttcatt gcctcatatc
002041 tctttcaatt gtgaaattat ttcaagatga atttctgctg acatgcttga tttgctactt
002101 ctgcacagat ggagaaaagt gccgttcttt ttaggccaaa gttgatcgtt gcgggtgcaa
002161 gtgcatatgc gcgtctttat gactatgacc gcatgcggaa ggtgaatttt actgctcaat
002221 agtgcatgct gaatcttcac cttctgtaat cagtcaaata attcacttgt tatgcaatct
002281 gcaggtttgt gacaagcaga aggcaatact tctagcagat atggcacata tcagtgggct
002341 tgtcgcagct ggtgttgttc catctccttt tgattatgca gatgtagtga ctaccactac
002401 tcacaagtca ctccgtggac cacgtggagc catgatcttt tacaggaagg gggtgaaagg
002461 agtaaacaag caaggcaaag aggtatatac ttgagcagaa caatagcaag atagtagcgt
002521 agggtgttgg tactgtttct tctccatcct gtgactctgt gagcttcaaa aaaataaaaa
002581 tgcctaatga ccctctaccg tctaggttat gtatgacttt gaggacaaga tcaatgctgc
002641 tgtcttccca ggtctgcaag gtggaccaca taatcatacc attactggct tagctgttgc
002701 gcttaagcag gtctgtagca cttctgatcc ctgatgtttt atattttata gatcacattg
002761 tttgcctttg tcttggactc taaaaggact ttctaacttc caggcaacta ctccggagta
002821 cagagcttat caagagcaag ttatgagtaa ctgtgcaaaa tttgcacagg tatgtgttca
002881 aattttgcta ggtttttttt tttatctaca atatggcttg atctttcttt atttcacaac
002941 acttaataat gattttgttc ttcacttagt tcacctcagc atgttacgaa ttgcaaatta
003001 ttggtttttc aacatgatga attgtgcttt aacatttgaa ccacttcctt atctggtggc
003061 aatttatcac ttccagagct tgacagcaaa aggctacgaa cttgtctctg gtgggactga
003121 caaccattta gtgttggtaa atctcaagag caaggtaaga caaacatgtg ggacgctttg
003181 ggtgttttga gatattttag ttctatcttt cagtttctct tatgagtgct caccaataaa
003241 ctttcagctg cttcctttta aaaaatatcg attgatgtct atttaacctc aagcttgctg
003301 tttctgtata taaatgatag ctaaatgtgc tttgcagata aacttgtttt tttttttcaa
003361 atttttatgc catatgggga caattatcat cctcttcaaa tttcatgttt agggcataga
003421 tggttcaaga gtggagaagg ttttagaaaa cgtgcacatt gcagcaaaca agaacacagt
003481 tcctggtgat gtttcagcta tggtaccagg aggcatcagg atgggtaaaa tctgccccta
003541 tgtggttttt tttttaattt acttaaaata gatttgcaaa atctcaatat cagctccatg
003601 atcatgcagg aaccccagca ctgacctcaa gaggatttgt tgaggaggac tttgctaagg
003661 ttgctgattt cttcgatgca gcagtgaact tggctttgaa ggttaaggct gcagcaggtc
003721 tgtcaaattc ctagtttttt ttttgtttga aaatgttgag aatacaaaac aattgttgca
003781 tgcattgagg tgccctcata tgatacttca ccctaggatc atcgtattca tcattttgtt
003841 tttccccttg caatttaggt ggaacaaaac tgaaggactt tgttgccact ttgcaatctg
003901 atagcaacat tcaatccgag attgcaaaac ttcgccatga tgtggaggaa tatgcaaaac
003961 agttccccac aattgggttt gagaaagaaa ccatgaagta caagaactaa gaaactttga
004021 atggaacagc aaggtattgt cctgacagat aaattggctc catttttttt tagcatgctg
004081 catgcagtat attagttgcc taggccttgg ctccgatcat gaaccatgtt tactctttca
004141 ttgttgcctc agcttgcacc ccttccagtt cttccaccac cgctccttcc tgcatgccgt
004201 tttccagaag caaattaact gtgcatttct gctatcagtc accgaattct tctgtcgcat
004261 ttatttcagg gtaaaagaaa aggcatcaag ctgaattcct gaggtgactg ttggaattct
004321 tgcaagaaca agtcggtgta aacatatatc catggagtgc catcttatgt aaaagggacc
004381 cctggcattt tacagcgtgt ggaaactttg tcaatagttc ttatcgtaga cacctactgt
004441 aagatgttat gctaatgcta tattaacctt cactatcttc ttggacaagc agttacacat
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
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