cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK059150     Link to RAP-DB ( IRGSP 1.0 / Build5 )
RAP ID Os03g0655400 ( IRGSP 1.0 / Build5 )
RAP - Chromosome No. 3
RAP - Location, Length 26,374,637 -  26,375,408  ( + ) ;   772(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 26,374,637 -  26,375,038 ( + ) ;   402 (bp)
Exon 2 Location 26,375,192 -  26,375,408 ( + ) ;   217 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No
KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
Tigr ID cDNA
Accession No
RiceXPro
FeatureNum
Os03g0655400 Os03t0655400-01 001023B08 101114 001023B08 7707 LOC_Os03g45280.1 AK059150 21095


Chromosome: 3 ,  position: 26,374,637 - 26,375,408 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 accacagcta gatcattagc aatccattcc gatccatcaa atttctcttg agaccgtaga 
000061 gagagagaga ggcgccaacc atggccggca tcatccacaa gatcgaggag aagctccaca 
000121 tgggcggagg cgagcacaag aaggaagacg agcacaagaa ggagggggag caccacaaga 
000181 aggacgggga gcacaaggaa ggcgtggtgg agaagatcaa ggacaagatc accggcgacc 
000241 acggcgacgg cggcgagcac aaggagaaga aggacaagaa gaagaagaag gagaagaagc 
000301 acggcgagga gggccaccac cacgacggcc acagcagcag cagcagcgac agcgactgag 
000361 ccgccgcgcc cccacaccgg cgccgtgcgt gcgtgcatgc aggtagttgt tgtgcaagaa 
000421 attgaagata tctttctttt ttctgttttg ttgctttgct ttgttgattt tctggttagg 
000481 atctgaaaat gttggcgtgt gactgacatg atgctaatta atctctcttg tgataatatg 
000541 ttttttgttt tgcaggtgat gctgcagatg attggaggag ttcgtagcag gattaattag 
000601 tatctgtgca atacgtgatg cagtgatctg tctcatgcat gtatctgtgc ttgattgcaa 
000661 gaaaaaaaaa aggcatggtt tgcctttgtg atgtactgat aataatggct gcacggtgcc 
000721 ttgtaataag aacgctaatt atgatgaaat tgatgtgtat tatcctggcg tc

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
BJ469084 baal13a17 297
more... (Total Hit Count: 8 )
Hit Wheat ESTs
Acc. No. Clone Name Length
BJ210352 wh27h17 565
more... (Total Hit Count: 108 )
/rice/oryzabase