cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK243036     Link to RAP-DB ( IRGSP 1.0 / Build5 )
RAP ID Os02g0797200 ( IRGSP 1.0 / Build5 )
RAP - Chromosome No. 2
RAP - Location, Length 34,784,345 -  34,784,992  ( + ) ;   648(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 34,784,345 -  34,784,408 ( + ) ;   64 (bp)
Exon 2 Location 34,784,510 -  34,784,613 ( + ) ;   104 (bp)
Exon 3 Location 34,784,710 -  34,784,992 ( + ) ;   283 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID
KOME
Clone Name
cDNA
Accession No
RNA Nucleotide
Accession No
RNA
Nucleotide GI
Genomic Protein
Accession No
Genomic
Protein GI
RefSeq Genomic
Nucleotide
Accession No
RefSeq Genomic
Nucleotide GI
RefSeq RNA
Nucleotide
Accession No
RefSeq RNA
Nucleotide GI
RefSeq Genomic Protein
Accession No
RefSeq Genomic
Protein GI
UniProt
Accession No
UniProt Entry
Name
Os02g0797200 Os02t0797200-01 302397 J100007H02 AK243036 AK243036.1 116012401 BAH01416.1 215769187 NC_008395.2 297600179 NM_001054929.1 115449228 NP_001048394.1 115449229 P51426 RL392_ORYSJ


Chromosome: 2 ,  position: 34,784,345 - 34,784,992 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 acacttcacg cacctagggt ttcgccgccg ccgccgccgc ttcttcgtcc ccgccgcgac 
000061 gatggtacgc tcctcgatct cgcgctcttc tctcgtcgaa tccattccgg ccgaccgacc 
000121 gacgtttcgt tgatgtgatt gcttgcttgt ttcgtttcgc cgcagccgtc ccacaagacc 
000181 ttccgcatca agaagaagct ggcgaagaag atgcgccaga accgccccat cccctactgg 
000241 atccgcatgc ggaccgacaa caccatcagg tgatttattc ttcgcgctca gtctttgctc 
000301 ctcccgagtt cgattcggct taggcatatc cgctgagatg tcgtggtttg gtttgtgttg 
000361 ttcaggtaca acgcgaagcg caggcactgg cgccgcacca agcttgggtt ctgagcagga 
000421 ggtagcaccg gttgctgcct gcggaggcta gggttactga gttatctgca tcattttgtt 
000481 ttatggatgt ttcagtgttt atgcaagctt aggatgtgat tccaggatgc tttttattaa 
000541 ggttttctga aatgttaagt gtagttgtac tctggtttac tgaggatacc atgctatgct 
000601 gtgctgagta aaggaaccat tccaatatat gtcttttgaa gttatttc

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
AK251392 FLbaf111b06 462
more... (Total Hit Count: 8 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ542952 rwhem3d20 661
more... (Total Hit Count: 458 )
/rice/oryzabase