cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK120314     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os02g0731700 ( IRGSP 1.0 )
RAP - Chromosome No. 2
RAP - Location, Length 31,329,736 -  31,331,770  ( - );   2,035(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 31,329,736 -  31,330,491 ( - );   756 (bp)
Exon 2 Location 31,330,586 -  31,331,770 ( - );   1,185 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No
KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
MSU ID cDNA
Accession No
RiceXPro
FeatureNum
Os02g0731700 Os02t0731700-02 J013055L13 215033 J013055L13 10695 LOC_Os02g49880.1 AK120314 8364


Chromosome: 2 ,  position: 31,329,736 - 31,331,770 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 agaggttttt tgtggaatca tcttttgtgc tgggagattt cttctgtttg ttcttttgtt 
000061 tcgtcgtgac gcatgagctg cagctcggag aaggcggccg gggccgtggg cggcaaggcg 
000121 gcgcgcgcgt gcgacagctg cctgcggcgg cgggcgcggt ggtactgcgc ggcggatgac 
000181 gccttcctgt gccaggggtg cgacacgtcg gtgcactcgg ccaacccgct cgccaggcgg 
000241 cacgagcgcc tgcgcctgcg cgtctcgtcg cccccgccgc tgacggcgcg ggcgtcggtg 
000301 gaggaggagg cggcggcggc ggtggggacg acgacgacga cgacgtcgaa gagagagggc 
000361 ggcgtcacgc cggcatggtc gaagcgcaag gcgcgcaccc ggcgcccgca ggtcaagagc 
000421 gtcgggcagc tgctctcgag gcggctcgtc gtgccggaga tggcggtgga gtcgtcggac 
000481 gaacggaagg ccgacgaaga cggagctcac gaggagctcg aggggcagtt gctgtaccgc 
000541 gttccggtct ttgacccctc cctcgccgag ttctgctcgc cgcccccgat cgatgacgcg 
000601 gcggccgcat cctcatcgtg cttcaaggag gacgccgccg acggcgccgt ggaagacgca 
000661 aagtatccgg cagctgcggc gtcgtcgccc gtgcagcagc tcccggatag ctttgtcaac 
000721 ttcgaaccga cggacgccga gctgagggag ttcgccgccg acatggaagc cctactcgga 
000781 caaggcctgg acgacagcaa cgagctgcag gactcgttct acatggagac cctagggcta 
000841 ataacgccgc cggtagaaga atccggccgg gtgaagatgg agctcgacgg cggtgttgcc 
000901 tccaacagca gggtatctct cccatcatgc cgcgctcatc cgaagccgga ggacgtcgaa 
000961 tccgccgacg tgctggacat cgatttcaac tgcacctcgc cggacgaaca gaagtcgtcg 
001021 gcgagcaacg gcgccgcagc cgattcgcag ttcttccaca ggagcctgga tctcaggctc 
001081 aactacgagg cgatcatcga gagctggggc aactcgccgt ggaccgacgg ccggccgccg 
001141 cacggccagc tcgacgactt ctggcccaac gaccaccatt actcggtacg tgatttttgc 
001201 aatttcaata ccgtgtcgtc catactctca tgctagcgca tgcgacatgc atactgaatc 
001261 gaaaactgtg ttggtgcagg ggttgtgggc tgcgggaggg ggcgggcatg gcgcggaggt 
001321 ggggatgatg acggtgaggc cgcggatgga cggcccgggg cgggaggcgc gggtgacgag 
001381 gtacagggag aagcggcgta cgcggctgtt ctccaagaag atacggtacg aggtgcggaa 
001441 gctgaacgcc gagaaacggc cgcggatgaa gggccggttc gtcaagcgcc cctccgccgc 
001501 cgccgccccg tgcgccgtca cctagacgta cgatcgcgca cggcccggcg cgcggcacca 
001561 tgcgtacgtg tccggtgtcg agacttgcct gcgttcgatc gtatgcctca tggactcgat 
001621 tggcacaaaa gttcacgcaa aatttgtcga agctgcacga ttcaagtagt ataacgttgt 
001681 tcaattcaaa agtttttctc ttcctttttt ttttcggttt tgttggtgtt tggctcggtg 
001741 cttttggatc tcttttatct ctgttccatc gaccggagag aaagtaggcg attgtacttg 
001801 tgtaaacatt ggtgttcatg gttttgtaga aacactccat aaaggaaaca aaatgacttg 
001861 tatatgtaaa ctgggttgtg cctgcgccac acccatgtac attgagtaat cagtacatac 
001921 ttaattattt tcttgcatgt agataactgg acaagtatct gaaaacttac cgggacgatc 
001981 aaaagtgttc atgataatca cattcataaa atcactgctg taagcattgt ccgct

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
BY864521 rbaet73g11 388
more... (Total Hit Count: 3 )
Hit Wheat ESTs
Acc. No. Clone Name Length
BJ256176 whh4e09 500
more... (Total Hit Count: 4 )
/rice/oryzabase