cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK111544
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os02g0674800
(
IRGSP 1.0
)
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RAP - Chromosome No.
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2
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RAP - Location, Length
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28,343,863 -
28,350,910
( - );
7,048(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
28,343,863 -
28,344,782
( - );
920 (bp)
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Exon 2
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Location |
28,345,943 -
28,346,316
( - );
374 (bp)
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Exon 3
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Location |
28,346,545 -
28,346,722
( - );
178 (bp)
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Exon 4
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Location |
28,348,382 -
28,348,609
( - );
228 (bp)
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Exon 5
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Location |
28,348,719 -
28,348,820
( - );
102 (bp)
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Exon 6
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Location |
28,348,919 -
28,349,635
( - );
717 (bp)
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Exon 7
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Location |
28,349,774 -
28,349,891
( - );
118 (bp)
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Exon 8
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Location |
28,350,004 -
28,350,248
( - );
245 (bp)
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Exon 9
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Location |
28,350,358 -
28,350,910
( - );
553 (bp)
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Chromosome: 2
, position: 28,343,863
- 28,350,910
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 ctggttctat ttttctctcg cgtccacacg acgggggggc ctcctctcct ctccctcctc
000061 ccctcgtctc cacactagac ttgccatttt gaccctccgc ttgctccctc ctcccgttcc
000121 tatctccccg ccgccgtaca taagtgcttt ctttaatcgg atgcgtcccc tcccctcgcc
000181 accagttcgt tcgctcgctc gctcgctcgc tcgccttgtt aatctatccc tccctctctc
000241 ccgcccctcc gtccgccgtg gagggttagg gttttgaggg ttcgctcgcc tcggcgaggc
000301 tttatctctc taccagtagt ctcttactct tcttcgttgg gccgtgggtt aggaatcggg
000361 ttgtgaggcg tgtgggaggg gcggggtaga tccaaggaag aggactttct cgagtttacg
000421 ccgtggtgtt ttgcttcggc gaggaggcgg cggcatgagc tttgggggcc tctttgacgg
000481 cggcggcggg ggaggcatgc agttcccttt cgccagtggc ttcgcgtcct cgccggcgct
000541 ctccctcgcg ctggtatgcg ttcggcggct gtcgcggacc ggggttgcgt cagctgttcg
000601 tagacacgag agttttctcc tcgatcgaga ggttattgat tgattctcta ttttgttgac
000661 aggacaacgc cggcggtggc atcggcgggc ggatgctcgg cggcggcgct ggcgctggtt
000721 ctagcgcggg cggcgcgatg acgagggaca ctgaggcgga gaacgacagc cggtcgggaa
000781 gcgaccatct cgacgccatc tcggccgccg gcgaggacga cgtcgaggac gccgagccca
000841 gcaactcccg caagaggaag aagcgatacc accgccacac gccgcagcag atccaagagc
000901 tcgaagcgta aagcaaattc ccctctcaac gctcgctcgt actttgcatc cttctcctct
000961 gtgccaacct ttttctcttt gtcctctcat gcatggatcg atgcgtccgt cttgtgtagg
001021 ctgttcaagg agtgccccca tccggacgag aagcagcgcg ccgagctcag caggaggctc
001081 tccctcgatg cgcggcaggt caagttctgg ttccagaatc gccgcacgca gatgaaggta
001141 aatcatccgc gagaacatcg catcgtgtgc cttagtcttc ttctctcgtc ggcgttcgag
001201 ccggttcgtt tcgtgcaatt tcctgacacg gtttcatgat ccccccgcgc gcgccgcgat
001261 cttcgtttta ccaagacgca actggagcgg cacgagaacg cgcttctcaa gcaggagaac
001321 gacaagctgc gcgccgagaa catgacgatc cgggaggcga tgcgcagccc aatgtgcggc
001381 agctgcggga gccccgccat gctcggggag gtgtccctag aggagcagca cctgcgcatc
001441 gagaatgcgc gcctcaagga cgagctcaac cgcgtgtgcg ccctcgccac caagttccta
001501 ggcaagccca tctccctcct gtcgccgccg cccttgctgc agccgcacct ctcgctgcct
001561 atgcctaact cgtcgctgga gctagcgatc ggaggcatcg gtggcttagg gtctctcggt
001621 acactacccg gctgtatgaa tgagttcgcc ggaggcgtgt cgagcccgat gggcacggtg
001681 atcacgcctg cgcgcgcaac cggggctgct ataccatcgc tggtgggtaa catcgacagg
001741 tccgtgttct tagagcttgc aatcagcgcg atggacgaac ttgtcaagat ggcacagatg
001801 gacgatccat tgtgggttcc ggcactgcct ggttctccca gcaaggaggt gctcaacttt
001861 gaggagtatc ttcactcctt cctaccgtgc attggcatga agcctgccgg ctacgtctct
001921 gaggcctcga gggaatccgg tctagtcatc atcgacaaca gccttgccct tgtagagacc
001981 ctcatggatg aggtttgggc taatgtcctc cacatttcgc accgtatact tatgttccgt
002041 tccaatccta taatgtacta atgttggtgt tacttgcatt catttcacag agacggtggt
002101 ctgacatgtt ctcgtgcatg attgctaagg caacagtgct tgaggaggtg tctaccggca
002161 ttgcaggaag cagaaatggc gcgttgctgc tggtgagtgc tgatcaacag tgctaatgtt
002221 catttatctt acatagtgta agacgtagct aacatatttt ctttctgaat tgttaatttt
002281 tcttgtgttt gcttgcaaca gatgaaggct gagctacagg tgctctcacc tctagtacca
002341 attagggagg ttacatttct ccggttttgt aagcagctgg ctgagggtgc atgggcagta
002401 gttgatgtgt ccattgatgg tttagtgaga gatcataatt ctggaacggc acccacaggt
002461 ggaaatgtga agtgtaggag ggtaccttcc ggctgtgtga tgcaagacac tcccaatggg
002521 tattgcaagg taacaactaa caagaagcca tttaaatggt ttctctgttc tctcacaata
002581 atggttcact atgattaatg tggcagtaag tcagttaata gtattgtcat cttgtagttc
002641 tgaacaggtt tgctggattt tttttatttt ttattttgaa agggactgct ttttattttt
002701 tattttgaaa gggactgctg gattttttac atcgaagtaa ctggtcaaag tttaccccgg
002761 cgttttagag ctatgttaat tccactactt ctccactacc actatcacta tgcactgctc
002821 agaacttggg gatgacgttt gtttaagagt gtgtgattag tttaatggtg cgatttgctg
002881 atgcccatgc agcatagtgt tcacaagtca aggcctaata ggttaattag ggttatgagc
002941 ccactaccca aaataaacaa ttcgtttggt caacgaggag atggagtata caatttattt
003001 agaataatta agtgtttttg tggatccaac actgttcccc aaacatgttt tcttttgctt
003061 gtttattctt agctccaact ttcctagggg attagatgct tctacccctt ggatggtgca
003121 ccttgggtaa cttcttgtcc gcaatttaat caatatgtcc cttacatgtt gaaatctgga
003181 ccacttgctc ctatttggtt gaaaaattgg tctctatgtc cttgggtttt cacaattctt
003241 aatttgatct caatctgtgg cactaatgaa ggaaacattt tgtttagaat ttctaaggtg
003301 aacaaaccaa caacatatcc ggcatctaat ctgtttttaa tagatttgaa gtaaagagca
003361 gttggatggg attagggatt tcagtagaaa taccacctga tctaggggct tttaggaaac
003421 atatttggtt ctactattcc tttgtcaact taatcacatg ctggtttata atatgcacat
003481 catgttggtg agttcattca ctttcttgaa gagttcagat ggagaaataa ctcttaaact
003541 agttggcatg cacgccctaa aaataaaaaa aactagttgc acgcatcatt cagaagtttg
003601 ggtatatcgc atggcaatga attaacaatg ttgcactctt gatcgaaatg attgaaattt
003661 gttggctaat ccatgtgcac agacatctgc tgttgtttct ttgtgttatt tttttatgtt
003721 gctcaagata tgaaaatctt tcttcagtag ttccctcatg tgtactcttt tcccgtactg
003781 tgcactcctt gctttcttga tacattattt cggatgaatc cagttcttag tctgtttgct
003841 tatgaataac aacagatcaa aatgtctcaa cccttaggcc agatataaat tagtaactaa
003901 acaaattata cgctaatgcc aagttacttg ttggtggtca acagtatagg ttcacatctc
003961 gaggctggtt aacaggcaaa ccttgcacat tttttacgtt tctgccccta cttgaccaac
004021 agcaaagagg ggaagaaaac ttagggtaaa aacaaaaatg tgctctgcac tgtgaagcca
004081 cagtagggtg ttgtattgca ctgcagagct ctcatctgat gtattgcacc taaagacaca
004141 tgcatgtggg cgtgcattta tgggctaacg gatgcattta ccctgtaggt cacatgggtt
004201 gagcatacgg aatacgatga ggcatcagtg caccagctct accgtccact ccttcggtct
004261 ggtctcgcct ttggcgccag gcgttggctt gcgacgctgc agcgccaatg cgaatgcctt
004321 gccatcctca tgtcctctgc tacagtgaca gcaaatgact cgactggtac aggaaattct
004381 gaacctctac ttgccatttt ccatctaaaa cgagctcaat ttgcggaatc aactgtgcgc
004441 aaattttgca tggaattcat ttcggttgac gtcattcaaa caggacaaac tgaaagaata
004501 tctccattgt tcgagtagaa tggccagtgc agttgtagga cagatatctt ggcttggaat
004561 actgataatt acgtgttgca tttgatgcat gcagctatat cgcaagaggg caagcgaagc
004621 atgctgaagc tggcacgccg gatgacggag aacttctgtg ctggggtgag cgcatcgtct
004681 gcacgtgaat ggagcaagct ggatggtgcg accggtagca tcggggagga cgtgcgcgtg
004741 atggcacgga agagcgtgag cgagcctgga gagccaccgg gcgtggtgct gagcgcggcc
004801 acctcggtgt gggtgcccgt ggctccggag aagctcttca acttcctgcg cgatgagcag
004861 ctgcgtgcgg agtgggacat cctcagcaat ggaggcccca tgcaggagat gacccagatc
004921 gccaaggggc agcgggatgg gaactcggtt tcactcctca gggccagtgt gagtatttgc
004981 taccccaaat ctgctctaaa catttcttct tttgtgcggt gcctaactgg atagtactac
005041 tgtatatagt aaaacgtaga gtaatttttt agcagtacgt gccatcaatt tcgaacaaaa
005101 cagcacagta gataaggcta accattttcg gtggtctctt ccgacacaag cctgcacaca
005161 agctggtatg ctgtatgtat tgcattaatc acaagtatgg gccaatgtaa tgtaggtgtg
005221 cgttccattt ctaggtgatg ggtgggctat taattctaaa gttattccac cttattcgtt
005281 tgttaacttg ctataggcct atagtagacg atttaaagtt cttggtctgt agtatttatt
005341 agtagccctt ttcttatctt caacccaaac tctacttagc actgcactta atcacttata
005401 tactgatcag tgcattgaca agaagattgc tgaaagctag gtagagacat tgtgcctaac
005461 aaagaaaagt ttataagttc ccgtagccta aatgagaggt tagcaagttt tgtgagacct
005521 ctactaatgt ctttcctttc cagaaaaaaa ggctactcct gtctaaacta tgaacaccgt
005581 acccgataac caatattgta aactgacgat gacatggaga agatcacaaa caaaaagtct
005641 ggcaactttc catcagatat tgttcggtta gagaaaaaag ggtcgtaatc aaggcccgac
005701 tagaacgact agcaccgaac tttacacgag gtctgcagaa gaggacaaac taggacagaa
005761 cagggtagga aacgcagatc tgcttgaaaa aggtgtcagg ttgacaactt gcactactgt
005821 gttgtgtgtg taccatgcgt tagcatgcat ccggatcctg tatgcagatc atgattccag
005881 ggactgcttg acaagaaaaa cataggaaaa acaaatcctc caaacactag catctccgga
005941 taatgaggct aatgtctgaa ctgtttatga ctggtcagat gttaactagt ctcgcgggta
006001 caatgtcact attaaatttc gttctttacc cccatgaatc cttttctcta attatgttgc
006061 ttctgtagtt cataatattt tgcagaaaat aaaacaagat attttctttt ttaccttttc
006121 tgatgcaggc tgtgagtgcc aaccagagca gcatgctgat acttcaggag acgtgcaccg
006181 acgcttctgg ctccattgtt gtgtacgctc cggtagacat cccggcaatg cagcttgtca
006241 tgaatggtgg cgactccacc tatgttgctc tgcttccatc cggattcgcc atcctgcccg
006301 atgggcctcg catcggcgcc accgggtacg agacgggcgg ctctctgctc accgtggcgt
006361 tccagattct tgtcaacaac cagcccaccg ccaagctcac cgtggaatcg gtcgagaccg
006421 tgaacaatct catctcctgc accatcaaga agatcaagac ggcgctgcag tgcgacgcct
006481 gagtgtttac agtggattta tgtccgcggg gatacgccgg cggcgacgag cctgagtcaa
006541 gaacgaaccg cgcgttgaaa aaagaaaata acctttgcta ggtgataagg atcttgcttg
006601 gccggtcctt agcacagagc aatggtggtg gttcgggtat tgactctggc ctctaccgta
006661 cgccgatctc tccccggcag ccggtgatca ttggatgata cagtaccatg cattttggac
006721 atttcttcga ggggttaaac ttatgcttta gtttcgtcgt cttagggagt caaacctgta
006781 tacttttggc agttggctca tcgttgctct agtgttgttt gttttttgtt gtgctatggc
006841 tgtatgaggt agcctgtact agtagtttct cggaaatgct gggttcatac tgtactagtg
006901 tcgtccatac ttcatatagg ttatggtaca agtgtaggat caaattgaag gtttcagaaa
006961 gtgtatcagc caataatgtc tgtttgacag tggcattgct atggatcagc tgaaaattgt
007021 tttttgcaat acacatggga tcaaagct
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
Update info.
