cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK108454     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os02g0555300 ( IRGSP 1.0 )
RAP - Chromosome No. 2
RAP - Location, Length 21,799,823 -  21,800,946  ( + ) ;   1,124(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 21,799,823 -  21,800,001 ( + ) ;   179 (bp)
Exon 2 Location 21,800,092 -  21,800,396 ( + ) ;   305 (bp)
Exon 3 Location 21,800,514 -  21,800,946 ( + ) ;   433 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os02g0555300 Os02t0555300-01 002143C12 111307 002143C12 17913 LOC_Os02g34970.1 AK108454 29111 AP008208.2 255670529 BAF09036.1 113536653 NC_008395.2 297600179 NM_001053657.1 115446684 NP_001047122.1 115446685


Chromosome: 2 ,  position: 21,799,823 - 21,800,946 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 ttgcacttgt agttgtagca tgggaggagc tacaaactta cctccaggtt tccacttctt 
000061 cccctcggat gaagagctcg tcgtccattt cctccgtcgc aaggtctccc tcctcccatg 
000121 ccaccctgac atcatcccga cgctgcttcc gcatcggtac aatccatggg agctgaatgg 
000181 taagtctgca actgcattga tcaatatgat ttcactaatt tgttctctta caagtcatgc 
000241 tgagtgctga tagaaattgc aattttaagg caaagcactg caagctggga accagtggta 
000301 cttcttctgc catctaacac aaagtaggac ctcatccaat gggcactgga gccccattgg 
000361 agttgatgaa acagtaagaa gcggcggccg caatgttggc ttgaagaaaa cgctgctatt 
000421 ctccattgga gagccctctg aaggcatcag aaccaactgg atcatgcatg agtaccatct 
000481 gctagacggg gattgcgtcg ctggcggtag cagcaacttg actagctcga gctctaacag 
000541 gaggtctcat aggaagagag gccactcaag catggtaagt gatgcatatc ctctctatct 
000601 tgctgctcga tcagcagtca acagttcagt aaattgcgta taaggagtaa ctggagcaca 
000661 aaatactaaa atttatgcat gatcattaca ggagtccaac aactgggtgc tgtgccgagt 
000721 gttcgaatcg agctgcggtt cacaagtgag cttccacggt gagggcaccg agctttcatg 
000781 cttagatgag gtgtttttgt cactagatga ctacgatgaa gtaagtttgc cgaataaata 
000841 gaaatataga acctagctaa gtcagtactc gttagagctg acagtaggtc ctatgcctat 
000901 caaaccattt gattagctat ggccgggtta tgttgatgat atctatacat aatctgttgc 
000961 attatgaata attaaatggt ctgggaggca ttgaacccaa tccagtccat cctagataat 
001021 taccatgtaa ttagttatcc cccaacgagt atgttgggct tgtgtcagac aactgtggca 
001081 tatgtgtgaa gcacaagtcg cttctaaaaa gatgagtttt tttt

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Wheat ESTs
Acc. No. Clone Name Length
BJ246535 whf24h23 622
more... (Total Hit Count: 3 )
/rice/oryzabase