cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK064074     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os01g0705200 ( IRGSP 1.0 )
RAP - Chromosome No. 1
RAP - Location, Length 30,962,720 -  30,963,936  ( - );   1,217(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 30,962,720 -  30,963,095 ( - );   376 (bp)
Exon 2 Location 30,963,194 -  30,963,634 ( - );   441 (bp)
Exon 3 Location 30,963,748 -  30,963,936 ( - );   189 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os01g0705200 Os01t0705200-01 107109 001125H02 11813 LOC_Os01g50910.1 AK064074 25669 AP008207.2 255672756 BAF05922.1 113533539 NC_008394.4 297598437 NM_001050543.1 115439456 NP_001044008.1 115439457
Os01g0705200 Os01t0705200-01 107109 001125H02 11813 LOC_Os01g50910.2 AK064074 25669 AP008207.2 255672756 BAF05922.1 113533539 NC_008394.4 297598437 NM_001050543.1 115439456 NP_001044008.1 115439457


Chromosome: 1 ,  position: 30,962,720 - 30,963,936 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 gtcacaaggc aagaggcaag aggcaagagc atccgtatta accagccttt tgagacttga 
000061 gagtgtgtgt gactcgatcc agcgtagttt cagttcgtgt gttggtgagt gattccagcc 
000121 aagtttgcga tggcttctca gcaggaacgg gctagctacc acgccggcga gaccaaggcc 
000181 cgcgccgagg tgaggtttcc cttcgtgcat ccgcgcgcgc gcaccgcacg tacaccacca 
000241 cgtttgtccc atccgttgcg cgtgcgctta catttgttgt ttgcttgttt cgtgcgttgc 
000301 aggagaagac ggggcgcatg atgggcacgg cgcaggagaa ggcgcgggag gccaaggaca 
000361 cggcgtccga cgccgcgggg cgcgcgatgg gcaggggaca cggcgccaag gaggcgacca 
000421 aggagaaggc gtacgagacc aaggacgcga ccaaggagaa ggcgtacgag gcaaaggacg 
000481 cggcctccga cgccaccggc cgcgccatgg acaagggccg cggcgccgcg ggcgccacga 
000541 gggacaaggc gtacgatgcc aaggacaggg cggctgacac ggcgcagtcc gccgccgacc 
000601 gcgcccgcga cggcgccggg cagaccggga gctacattgg acagaccgcc gaggccgcca 
000661 agcagaaagc ggccggcgcc gcgcagtacg ccaaggagac cgcgatcgcc ggcaaggaca 
000721 agaccggcgc cgtgctccag caggttcatt agcactcgca gatcgtgttc ttttcctaac 
000781 cattctattt tgttaaacat tcatgctaat tgctgcaaaa aaacgctctc ttggtgtgca 
000841 ggcaggggag caggtgaaga gcgtggcggt gggggcgaag gacgcggtga tgtacacgct 
000901 cgggatgtca ggcgataaca agaacaacgc cgctgccggc aaggacacca gcacctacaa 
000961 gcctggaact gggagtgact accagtaata cggtataaga agcatgtgtc gtctttggca 
001021 ctgatgccaa agtgtacgtg ttgtatcctc ttttttaagt ttcagctcga cttcgacgtg 
001081 ttcggtgtca cactttggtt tttcagttgt gctcaactgt tcatgtttct ggttccatgg 
001141 agggccagtg tggaggtcaa tgtttaagct ttcgttttaa aatctgataa taaagttggt 
001201 taagacctga aagcgtt

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
BY851248 bast36h06 284
more... (Total Hit Count: 2 )
/rice/oryzabase