cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK106518     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os02g0693700 ( IRGSP 1.0 )
RAP - Chromosome No. 2
RAP - Location, Length 29,343,583 -  29,354,615  ( - );   11,033(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 29,343,583 -  29,344,395 ( - );   813 (bp)
Exon 2 Location 29,344,497 -  29,344,909 ( - );   413 (bp)
Exon 3 Location 29,345,000 -  29,345,247 ( - );   248 (bp)
Exon 4 Location 29,345,324 -  29,345,770 ( - );   447 (bp)
Exon 5 Location 29,354,127 -  29,354,615 ( - );   489 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No
KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
MSU ID cDNA
Accession No
RiceXPro
FeatureNum
Os02g0693700 Os02t0693700-01 002107C02 109369 002107C02 15503 LOC_Os02g46680.1 AK106518 4651


Chromosome: 2 ,  position: 29,343,583 - 29,354,615 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 aaaacgcggg ctaaattacg gccgccacca ttccagcgac gacagcgagt gaagtgaact 
000061 ggaggagctg taccactgtg tactcctagt ctttaaagcc tcagctcgcg cgcggccggc 
000121 caccacctcc ccccacgcag gcgccacaca gcgtcttggc tcacccgcac acgcgatctt 
000181 gttggtagcg agtcggagaa gatgagctcg ccggtgcatg gcgtgcagga gcatcggcag 
000241 agcggcggcg gcgagaagaa ggcggagcag ggagagaagg aggcggcggc gaaggtggag 
000301 aaggtgccgt tcctgaagct gttctcgttc gccgaccggt gggactacgt gctgatggcg 
000361 gtggggtcgc tgggcgcgtg cgcgcacggc gcctccgtcc ccgtcttctt catcttcttc 
000421 ggcaagctca tcaacatcat cggcctcgcc tacctcttcc ccaccaccgt ctccggccgc 
000481 gtcgccaagg tacactagct agtaacacat cccgatccac ccattgagca tgcactgcac 
000541 cgtgcatgtc acactctgtt tgcttgctca ccttgtctcc ccgtgcatgc agtactcgct 
000601 ggacttcgtg tacctcggca tcgtcatact cttctcgtcg tggaccggtg agccctgatg 
000661 catgcgtaga tttcgagacg cgagcgatgc aatgcgcgcg gtggttggtt gattggtggc 
000721 tctcgtgtgc gtgcagaggt ggcgtgctgg atgcacacgg gggagcggca ggcggcgaag 
000781 atgcgccagg cgtacctccg gtcgatgctg gaccaggaca ttgccgtctt cgacaccgag 
000841 gcctccaccg gcgaggtcat caacgccatc accagcgaca tcctcgtcgt ccaggacgcc 
000901 atctccgaga aggtacacac acttctactc acccccgcgt aacataacat caccatgcac 
000961 acgccacgcg cgtgtaacaa acatgcaacc cgcgcgcgtt gctttttttc tcgccgcggc 
001021 atcgcgtacg cacgcgacgc cgtgccggcc gttcacgtga agcgaaaggg gaaaaagaaa 
001081 atcccaaact gagaagcgat cggagaggag aggattaacg acggccggta gacagggaag 
001141 caaacgtagg acggtcgggt gagtagatag ggcggggcgg cgccgggaag ttattagggt 
001201 tggtgagggg cattgaaggc gttgcgggca gtagtagatc gttcacagtc ttcgcctctc 
001261 gatctggcct ggatgcgctc atccactcaa ctctgtagta actgcgaaac agtactagga 
001321 gtagatatga gtactcgctg attgattcga gttaactccg ttgaattcat ctctatcaat 
001381 tgggatgcac atcaatccaa caaccactcg aatccaccca atgggatccc gtacatttgt 
001441 ccagtctttt acgttttctc catttgagtt cagtgcaggg gagagtgatc ctctgccttt 
001501 gccaactctg ccgttcagaa gccaggactc cggagtggcg gagacgcgga gtgattggta 
001561 atttggtacg tgtagtgtct gcagtaattt gccatattac ttcttccatt ccatataaaa 
001621 aaacaaccta ctccctccgt cccataatat aagagatttt aagtttttgc tttcactgtt 
001681 tgaccactcg tcttattaaa aaaaaaattg tgtaaatata aaaaataaaa agttgtgctt 
001741 aaagtacttt ggataataaa gtaagtcaaa aataaataaa ataataattc caaacttttt 
001801 tgaataagac gagtggtcaa acagtgtaaa caaaaactta aaatccctta tattatggga 
001861 cggagggagt agcaaatatg atacattcta gtatgacaaa tctaaatatg tctccttcta 
001921 tcatataaaa tcctaatcta atatcagata tgacacttct tagtattata tatatatata 
001981 tatatatata tatatatata tatatagata gatagaatcc gtcgtattag aatacgtcac 
002041 attcggtact agattgattt tttaatgaga tggaagaaat agacatctaa gcaatttata 
002101 tataggagat ttgtaggatg tgactgtttc tagtaaggcg ggatgtatgt agtcaaatga 
002161 tccacgtatg tgatacattt tcttcaacaa attttattaa gaaaaaagag aaattagaat 
002221 attttacaac aaatgtgatt gttggtagtt agatttctga gcgatccaac caggacaagc 
002281 cgatcaaaat tctgctataa agctgggcag ctcatggccc ataacctacc acctcgctac 
002341 ccatgatctt tgaatctatt tgatgacgac acctccaaat tcagccgctc gccatgcatg 
002401 cccaccactc tgccataatg ccatagcatg ctcgtgcatt cctctccttc caaacacacg 
002461 agtgattttt ttccttaata ataaaaatag tttacatctc caacatgcac atagcatccc 
002521 gctgctcatg tgatagtatt aaatatcaag tatgaaacca actagtgtga aagggcatct 
002581 agcctaggta ttgtagtgac ctaagtagca cctaaggtca tgagttcaaa tcttcgtaag 
002641 agtgaatttc atattggttt atttaagggc taagtttctt gtttgtggtc ctgagtttaa 
002701 atctctatag aaccaaattt cagatcggtt atttgatggc taagtttcaa ttggatgtaa 
002761 aagctgcgta aaaaatactc ttctctatat aaaaaataaa gccaactagt agacgtaaag 
002821 ataatcttcc tagattagct aatttcttat catttcaata tcgttaaatt gaccaacata 
002881 aaactctgtc ttcaaataaa attattattt ttgggaccgc tcggatttat cttttcggtt 
002941 agctcctcca tggcatctgg cagcaggaga tatacaggca cggctgggtc ctcttccaga 
003001 cctgtcttgt gtagctacaa ctgatgaaaa gatgatggcg tgtctccggg tcttcagcac 
003061 aaagggggca gcttcgtcga tgattttgtt ttttgaaaga ccttggtgtg attttctttc 
003121 tcaagccaat cataaattca taatggtact gaatatctac cagaactaat ggccggtaag 
003181 catgaatggc atgtggttat gtacattgat cttctcgtgt tatgatctaa ggagagaaaa 
003241 aaacgaaaat gatgaatatt ataaattatc ttaggcctgt tatcgaatgg aggattctcc 
003301 attttaatga gaatcgaacc aattcctatt aaaatcctgt aaaaatgttg ggcaattttt 
003361 ataggactgt cacatgaagt agttcatttc ccataaaaat cctcttaaat tcccatgaaa 
003421 tgaattgcat atcctgatat ccacccaact gtagcagctt tatgtcactg gtggagaagt 
003481 gttttttagt cccggttcgt aaccccccta cagtcccggt tttcaaaccg ggactaccaa 
003541 tccgggacta aagatcgcta tctttagtcc cgggtgaaaa aaccgggact aaagatcgat 
003601 ctttagtccc ggttgatgac accaaccggg actaaagatt tagtcccggt tggtgttatc 
003661 aaccgggact aaagagaggg tagcggcagt ccatcagcta gtcctttttt cttttttatt 
003721 ttctcacgaa tcgagtggta tgcatatcat caaatcaaac cccaaatcca catcacaact 
003781 ccacagcacg attcacagat tcaccacaaa ttcattcaca atatccattc acatattcat 
003841 tcataacatc acaaatatat tcacaatatt gattcaaagg ttcattgaca acatcgagtc 
003901 acatactcat tcacaacatc acagattcat tcacaatatc gattcataga tttattcaca 
003961 gatcaaaaca tccaaaccac aaattaaaaa aaatcaaaaa aaaatcgact cacctgccgg 
004021 cctcccatcc cgccgccggc cagccaccca tctcgccgct tcccctccgg ccggatctgg 
004081 gggaggggag ggcgaggccg ccggcgaccg gcctccatcc cgccggccca cgccgggccg 
004141 ccgccgcccg tcctccatcc cgctggcccg cgcccggccg caatcccgcc accgccggcc 
004201 ggccgccgcc agccccagcc cgcgcctggc cgccgccagc ccgcgcccgg ccgcctccat 
004261 cccgccaccg ccggccggcc gccgccagcc cgcgcccgtc ccccatcccg ccgccgtcgg 
004321 ctgcctctgc aagaggaaga gggggagggg aggaggagag ggggtgagag aagaggaagg 
004381 ggagaggatg gagataagga aggagaagaa aaagagataa ggatgggaga tagagagaga 
004441 gaggggctac gcatgcgctt gtgcgtgggc tggtgcgtac gctttattcc cggttgatat 
004501 tatcaaccgg gagtaaagat ccctgggatc tttagtcccg gttggtaaca ccaaccggga 
004561 ctaaagatcc tatctttagt cccggttggt gttatcaacc gggactaaag atatcggggg 
004621 gcctgacaag gcctaacaga tttagaaccg ggactaaaga tcatttttag tcccggttgg 
004681 taacaccaac cgagactaaa gatcaaatat gcccgctgta gccaccaacc gggactaaag 
004741 atcatcttta gtcccggttt ttagtggaac cgagactatt gtggatttcg ggcgaccgac 
004801 caaagatggt ttctccacca gtgtgtgtac tctggttcat ttttgtgcca gttgtaaacg 
004861 atgttggttc aaatgttcct gtcgaaaaca agatgaaatt taaagaaaac agtagtacta 
004921 tctatactgt gcctcatcct acatttaaag tgctgtttgt aactactact aattcacata 
004981 tactaacagt actagcactt ggggagtatt tttcccctga agtagctgtc gcatattcta 
005041 gtagctgtcc ctgaagtatc ggtgaaaaaa aaatgagttt tggtgataat aatctcacag 
005101 gattggcata aaacacgcaa taaatgattg tcttgagcca ccgtcttttt ggatagagca 
005161 taacctgcat atggcatcca agtggttatt taagggatct gatactatgt tgcctgactt 
005221 gtctatcagt aacactaact ttttgcgacc actccagcta atggagccag ctaattcgta 
005281 aacattatac tctcacaaat gctacaccta gtgtttgttt gaattctaag tcatcaccgt 
005341 aactggtatc gtctgagcta attaaatcat atactctaaa tgaaaatgag tacacaaagg 
005401 ccttgtagac ggcacactta accagttcca attcatccag atcctcactg gcgtactgtt 
005461 cgctgctaat cagtaccaac ctcttaattt cctgagcaat aggtgaaaat gattgttacg 
005521 attcactaaa caagaatgct gaaaacgccc ttcttaagct atcattgaag gaggagtaca 
005581 tcgtttgatt ggaaaggcta agctactgtc gtagatctcg acttctctga aatgaaccag 
005641 tggagaggaa caagttgttt ccatctttgc aagcatggtt cttttcgtcc caactgccaa 
005701 ctgaactgcg aaccattttc tggggtctca acatgtgaat tctagtttgg tctacagtaa 
005761 tgcaggtggg gtatttgcgc aataagcatc ttgcttgttc tttgtacaat tgtaatacta 
005821 ttggaacatt tgcacgatgt acggttgccc cacacggaga gatggaggat ggttgctgcc 
005881 actggaaaaa ttattattcc ttccgttccc agaaccctcc gtcttaaaga caagggatat 
005941 tagcttttac atggtctcca acattatact tcaaaagctt ttctatattt tggacaaaga 
006001 aattactccc tccgtttcta aatatttgtc accgttgatt ttttagcaca tgtttgacca 
006061 ttcgtcttat tcaaaaactt ttgtaaaata tataaaacta tatgtataca tataactata 
006121 tttaacaatg aattaaatga taagaaaata attaataatt acttaaattt tttgaataag 
006181 acgaacggtc aaacatattt aaaaaagtca acggcgtcaa atatttagaa atggagggag 
006241 tactcgccaa tggacactat ttatatttat attacttaaa gttttattga ctatcttttt 
006301 taaaaaaata aatacttaaa aataccgtat tgttcaagtg tgttgcatcc taaccataat 
006361 tattattatt tttatcgtag tctaaccttt tttttagaag ggtacaactc aggacgcaca 
006421 ctaacacaca ctaggaatgt gcacgtttct aacgcacact aacacacact aggaggaaac 
006481 atgcagtccc actgaacgcg cgcgcgtgta ccctatacct agtcgggacc aagcgaagtc 
006541 agtccgggga aacggaaaaa acccctggtg agacacgcga tttgcgatcc caggatcaaa 
006601 cccgcgcggg ctactcgctc acctggcgac gctagccaac cgagcaatgg cgacgctagc 
006661 caaccgagca acgctcggtt ctccgtagtc taaccattta aaaggtgtcg cttagctcac 
006721 tcctggtttg gacggcccag ctctctgaaa aggctgcagg actactcttg cctgtatcgt 
006781 ccgtacatac ctcgaggccc aatataggcc ctttttctta agcccagtaa gcccaattcc 
006841 agaattccaa atcgcagtgc tgcgttggaa cttggaactt gaagggccga agggggacga 
006901 gcgatccagt gcgctgtcac gtgtcacgtg tgtgcttggc gctgacgagc tgcgttgttc 
006961 ttgtgcaggt gggcaatttc atgcactaca tcagccggtt cctggccggc ttcgccatcg 
007021 gcttctcgca ggtgtggcag atcagcctcg tcaccctcgc catcgtcccg ctcatcgcca 
007081 tcgccggcgg catctacgcc tacgtcacca tcggcctcat ggcgcgcgtc cgcaagtcct 
007141 acgtcaaggc cggcgagatc gccgaggagg tccgtccatc gatcgtgccc ctctcaatgg 
007201 acttctccca gcacgaggac gtacgtacac gtactgatga cgccgccgta ggtgtggtgt 
007261 gcaggtgatc ggcaacgtgc ggacggtgca ggcgttcgtc ggcgaggaga aggcagtgag 
007321 gacgtaccgg gaggcgctgc tgaggacgta caagtacggc aagaggggcg gcctcgccaa 
007381 gggtctcggc ctcggctcca tgcactcggt gctcttcctc tcctgggcgc tgctcatctg 
007441 gttcaccagc gtcgtcgtcc acaagaacat ctccaacggc ggcgagtcct tcaccaccat 
007501 gctcaacgtc gtcatcgccg gcctgtgagt ctgcaaccct ggcgtgtttg tgtcagcgaa 
007561 tgcacacgcc catggcgccc gtgcataatt tggtcgcaat atgtgtcgtg caggtcgctc 
007621 gggcaggcgg cgcccaacat atcgacgttc ctccgggcga ggacagcggc gtacccgatc 
007681 ttccagatga tcgagaggaa caccgtcaac aaggcgagct ccaaggccgg ccgcacgctg 
007741 ccgtcggtcg acggccacat ccagttccgc gacgtgcggt tcgcgtaccc gtcacggccg 
007801 gacgtcgtca tcctcgacag gttcagcctg gacttcccgg cgggcaagat cgtcgcgctc 
007861 gtcggcggga gtggctccgg caagagcacc gtggtctcgc tcatcgagcg gttctacgag 
007921 cctctcacgg gcgcggtact gctcgacggc cacgacatca aggacctcga cgtgaagtgg 
007981 ctgcgccagc agattggcct cgtcaaccag gaacccgcgc tgttcgccac gagcatccgg 
008041 gagaacatac tctacggcaa gggggacgcc agcatggatg agatcaacca cgcggcgaag 
008101 ctgtcggagg cgatcacctt catcaaccac ctccccgacc ggtacgagac gcaggtcggc 
008161 gagcgcggga tacagctctc cggcggacag aagcagcgga tcgcgatctc gagggcgata 
008221 ctgaagaacc cgtcgatact gctcctcgac gaggcgacga gcgcgctcga cgccgagtcc 
008281 gagaagagcg tgcaggaggc gctggaccgc gtcatggtcg gccgcaccac cgtggtgatc 
008341 gcgcaccggc tgtccaccat ccggaacgcc gacacgatcg ccgtcgtgga cagcggcagg 
008401 atcgtcgaga ccggcacgca cgagcagctg atggcgaacc ctcgcagcgc ctacgcctcg 
008461 ctgatccagc tgcaggaagc agctcagctc cagaacaagc aatctttctc cgacagcgcc 
008521 agcctcagcc gaccactaag gtatgtgtac gtgaacgtga acgtgacgac gtcgtgtcaa 
008581 gttccgaccg gccaccgcga gctaacgacc atggcttttg cgtgctgcta gctccaagta 
008641 ttcgagggag ctatcgagga cgagcatggg tgggagcttc cgctcagaga aggactcggt 
008701 tagccggtac ggcaccgtgg aggcgcacga cgaaggaggg cacaagagca agccggtgtc 
008761 gatgaagaag ctctactcca tgatacggcc ggactggttc ttcggcgtgt cgggcaccgt 
008821 cagcgccttc gtcgccggct cgcagatgcc gctgttcgcg ctcggcgtca cacaggcgct 
008881 cgtgtcctac tacatggggt gggagaccac gaagcgggag gtgcgcaaga tcgcggtgct 
008941 cttctgctgc ggggccgtgc tcaccgtggt gttccacgcg atcgagcacc tcagcttcgg 
009001 catcatgggg gagcggctca cgctgcgcgt ccgggagagg atgttcgcgg ccatcctccg 
009061 gaacgagatc gggtggttcg acgacaccag ccacacgagc tcgatgctgt cgtcgcggct 
009121 cgagacggac gccacgctcg tgcgcaccat cgtcgtcgac cgctccacca tcctgctgca 
009181 gaacatcggc atgatcgtga cgtcgctcat catcgccttc atcatcaact ggcggatcac 
009241 tctcgtcgtt ctcgccacat accccctcat ggtcagcggc cacatcagcg aggtaagcac 
009301 agaatctcgt cagatgatcc tggctgattc tcgatcaaat tcacaatctg tgtgttgtga 
009361 tgcgacagaa aatgttcatg aaaggctacg ggggcaacct tggcaagtcg tatctgaaag 
009421 ccaacatgct ggccgcggag gcagtgagca acatccgaac ggtggcggcc ttctgcgctg 
009481 aggagaaggt gataaagctc tacgccgacg agctgaagga gccagcgaag cagtcattcc 
009541 ggcgaggcca gggcgccggg ctcttctacg gagtttccca gttcttcctc ttctcttcct 
009601 acgcgttggc tttatggtta gtgctacacg aagtttggaa cgcggtgaat aattcagtcc 
009661 aaatttgtat cagtagtaag atttgaaagc tttgatcggg attcaggtat ggttcggagc 
009721 tgatgagcaa ggagatggcc agcttcaagt cggtgatgaa gtcattcatg gtgctgatcg 
009781 tgacggcgct ggccatgggg gagacgctgg cgatggcgcc ggacatcatc aaggggaacc 
009841 agatggtgtc gtcggtgttc gagatcctgg acaggaagac cgacgtcctg atcgacgccg 
009901 gcaacgacgt caagagagtc gagggcgtga tcgagctgag gggcgtcgag ttccggtacc 
009961 cggcgcggcc cgaggtggtg gtgttcaagg gcctcgacct cctcatgaag gccggcaaga 
010021 gcatggcgct cgtcggcatg agcggctccg gcaagagcac cgtgctctcg ctcatcctcc 
010081 gcttctacga ccccatcgcc gggaaagtct tgatcgacgg tacgtatcga tctcacagct 
010141 tccaaaatga attgctctgc atatctcccg aacggaatcc gaattctgaa ctcgtatggc 
010201 tttgatgcga ttctttgcag ggaaggacat caggaaggtg aagctcaagt cgctgaggaa 
010261 gcacatcggc ctggtgcagc aagagccggc gctgttcgcg acgaccatct acgacaacat 
010321 cctctacggg aaagacggcg cgacggaggc ggaggtggtc gacgcggcga agctggcgaa 
010381 cgcgcactcc ttcatcagcg cgctgccgga gggctaccgg acgagagtcg gggagcgcgg 
010441 cgtgcagctc tccggcgggc agcggcagcg gatcgccatc gcgcgcgcca tcgtgaagga 
010501 cccggccatc ctgctcctgg acgaggcgac gagcgcgctg gacgtggagt cggagcgcgt 
010561 cgtgcagcag gcgctggacc gggtgatgag gaaccggacc accgtgatgg tggcgcaccg 
010621 gctgtcgacg atcaagaacg ccgacgtcat ctcggtgctg caggacggca agatcatcga 
010681 gcagggtgct caccaccagc tcatcgagaa caggaacggc gcctaccaca agctcgtcag 
010741 cttgcagcag cagcaacagc agcaggacca gatgcagagg cattgatctt gatcgatctc 
010801 ctgtgcttct gtatatttgc tgtgtgcctc cgcttcttct tggttgttaa ggagtacagt 
010861 acatggaatg aaacaaatcg ctgcggtaag attcaattat ttttccattg taaaacgagg 
010921 ggttcacgat tatgtacaag agaaagtatt ggatttgttt ctctttttct gtacaagtta 
010981 aataactgaa tttagtagat acgcgattac atttacataa gcagattcat ggc

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs  
Acc. No. Clone Name Length
AK250171 FLbaf64l02 4222 view details
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ679744 whok17l10 667
more... (Total Hit Count: 10 )
/rice/oryzabase