cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK063822     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os01g0850900 ( IRGSP 1.0 )
RAP - Chromosome No. 1
RAP - Location, Length 38,369,312 -  38,370,234  ( + ) ;   923(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 38,369,312 -  38,370,234 ( + ) ;   923 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 RNA Nucleotide
Accession No		 RNA
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os01g0850900 Os01t0850900-01 106836 001122A04 12507 LOC_Os01g63210.1 AK063822 19389 AK063822.1 32973840 BAG88877.1 215686624 NC_008394.4 297598437 NM_001051352.1 115441074 NP_001044817.1 115441075


Chromosome: 1 ,  position: 38,369,312 - 38,370,234 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 actcatccaa gtatccaaca aagaacaaac ccacccccgc cgctgagatc gaatccgacc 
000061 ttaattttca cctgctcgct gatctcgccg gccgtcgacc gccatgggga tggtgctggg 
000121 caagatcacg gtggagacgc ccaagcacga ggtgctccac accggcgccg gctacgaggt 
000181 ccgcaagtac ccgccgtgcg tcgtcgccga ggtcacctac gaccccgcgg agatgaaagg 
000241 cgaccgcgac ggcgggttca ccgtcctcgg caactacatc ggcgccctcg gcaacccgca 
000301 gaacaccaag ccagagaaga tcgacatgac cgcgccggtc atcacctccg gcgagcccga 
000361 gagtatcgcc atgacggccc cggtcatcac ctccggtgag cctgagccgg tggcgatgac 
000421 cgcgccggtg atcacggccg aagagcgcag ccaggggaag ggtcagatga caatgcagtt 
000481 tctgctgccg tccaagtaca gcaaggtgga ggaggcgccg cggccgacgg acgagcgggt 
000541 ggtgctgcgg caggtggggg agaggaagta cggggtggtg aggttcagcg gcctgaccgg 
000601 agacaaggtg gtgaaggaga aggcggagtg gctcaaggcc gcgctggaga aggacgggtt 
000661 caccgtcaag ggccccttcg tgctggcgcg gtacaacccg ccgtttactc tgcctccgct 
000721 gcgcaccaac gaggtcatgg tccccgtcga gtgatacggc gagactccat tgttggtgtc 
000781 tagtgatgta ctgatgcgca tgtactttta tcagggtgtc cttgttactc ctaggcccta 
000841 gctatttctc tatttcttta tccttttgac tttgttctgt actgatgtat gtttggatca 
000901 acgaataatg gacatatctt ggg

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
AV936380 rbaal11b24 650
more... (Total Hit Count: 16 )
Hit Wheat ESTs
Acc. No. Clone Name Length
BJ230452 rwhdl22m01 566
more... (Total Hit Count: 6 )
/rice/oryzabase