cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK103084     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os02g0762400 ( IRGSP 1.0 )
RAP - Chromosome No. 2
RAP - Location, Length 32,967,308 -  32,968,945  ( + ) ;   1,638(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 32,967,308 -  32,967,798 ( + ) ;   491 (bp)
Exon 2 Location 32,967,899 -  32,967,963 ( + ) ;   65 (bp)
Exon 3 Location 32,968,069 -  32,968,278 ( + ) ;   210 (bp)
Exon 4 Location 32,968,447 -  32,968,945 ( + ) ;   499 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI		 UniProt
Accession No		 UniProt Entry
Name
Os02g0762400 Os02t0762400-01 J033118G18 213932 J033118G18 15131 LOC_Os02g52480.1 AK103084 26498 AP008208.2 255670529 BAF10118.1 113537735 NC_008395.2 297600179 NM_001054739.1 115448848 NP_001048204.1 115448849 Q6Z6G5 KRP1_ORYSJ


Chromosome: 2 ,  position: 32,967,308 - 32,968,945 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 agggaaacgg ccaaagaagg cgacggcggc ggcgcaggag gggcgcgcac gcggcgcaga 
000061 tgggcaagta catgaggaag ttcagggggg ccacggggga ggagttggcc gccatggagg 
000121 tcacgcaggt ggttggcgtc cggacgaggt cgaggtcggc agcggcggcg ggcgcgacga 
000181 cgacgaaggt gaaggcggcg tcggcggcgt ccaccaggag gaggaaggcg ctgctgccga 
000241 cggcggtcgt ggggactact cgccgtgacg gcgggagctg ctacctccag ctgaggagcc 
000301 gcatgctgtt catggccccg ccgaggccgg cgccggccgc gagggctccg gttgtagcgg 
000361 aggcggcggg ttccgggaac ggagcggcgg cgcatgcggc ggctggcctc tcgcgttgct 
000421 ccagcacggc gtcgtccgtg gacgcggcgg ctcaggacag gagcctcgcg tgccgctccg 
000481 acgtcgcgga ggtgagggaa tcgaaaccct agaattcgaa ttcgaaaaat gatcccagat 
000541 ctctaatcac cggttgctga agcgtgcgtg ctttttggtg atgttctaca ggcaggcagc 
000601 gagcatgtcc cggagggctc cgcgagcgac tcggcgagcg gccgtgaccg cgagaggtgg 
000661 gagaattctc cctcatttcc ggcaaattct tctgaattat gcgttctgac atgcccctga 
000721 cgccgaatca ccctcgattt ttcaaaattt tcaaattcca ggagagaaac aactccatca 
000781 agctttctcc ccggagaggt gagcgatctg gagtcggatc tggctggagg acagaagcgc 
000841 agccgtccac taccttctgc ggcaacagcc tcagcacagc aagccacgcg gccgaagatt 
000901 ccgccggccg ccgagatcga ggcgttcttc gcggcggccg aggaggctga ggccaagcgc 
000961 ttcgccgcca agtaagtata tacagaattt ttaccgctcg ctgtaacatc tagtaaaagt 
001021 tactgcgcgc cctagctagc ttcgttcttc ttctccgatg ctcgcgcgtg gcgtgaattt 
001081 gccgctgctg ccggcgagca agataattaa cgtgcgtgcg cttcttccca tggccgcagg 
001141 tacaacttcg acgtcgttcg cggcgtgccc ctcgacgccg gtcggttcga gtggactccg 
001201 gtggtcagca gccgaagctg aagcgagcgt gcagattaag cggaagctag aaaggaaggt 
001261 acaggggggc gccgtgtaga aagggaaggc gagctagaga gaggagaaga agaagaagaa 
001321 aagatgctca tccaaaggga ataaactgga aaagtgggag actacaaaaa aagaagcatt 
001381 atagcctaac aaccaccgat tcgactcttt tttctttcac attttctttg catttttact 
001441 cttactgtgt actagaaagt agtagcagta gtaaactagt aattcgtccc agtatttatc 
001501 agaggtttat ctcgatagga atagatatat tatcccctta ctgtaattgc ctccatcttg 
001561 tatttggatg gaaattaaat ttactgtaca gcagcagcag ctgttctgca agtttaagtt 
001621 aaccatcacc gttttatt

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Wheat ESTs
Acc. No. Clone Name Length
CJ666158 whkp6d22 486
more... (Total Hit Count: 2 )
/rice/oryzabase