cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK100323     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os02g0809800 ( IRGSP 1.0 )
RAP - Chromosome No. 2
RAP - Location, Length 35,465,722 -  35,471,012  ( + ) ;   5,291(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 35,465,722 -  35,466,167 ( + ) ;   446 (bp)
Exon 2 Location 35,466,267 -  35,466,320 ( + ) ;   54 (bp)
Exon 3 Location 35,466,410 -  35,466,701 ( + ) ;   292 (bp)
Exon 4 Location 35,466,820 -  35,467,216 ( + ) ;   397 (bp)
Exon 5 Location 35,467,884 -  35,467,935 ( + ) ;   52 (bp)
Exon 6 Location 35,468,275 -  35,468,349 ( + ) ;   75 (bp)
Exon 7 Location 35,468,481 -  35,468,608 ( + ) ;   128 (bp)
Exon 8 Location 35,468,714 -  35,468,836 ( + ) ;   123 (bp)
Exon 9 Location 35,469,092 -  35,469,335 ( + ) ;   244 (bp)
Exon 10 Location 35,469,426 -  35,469,530 ( + ) ;   105 (bp)
Exon 11 Location 35,469,614 -  35,469,658 ( + ) ;   45 (bp)
Exon 12 Location 35,469,747 -  35,469,899 ( + ) ;   153 (bp)
Exon 13 Location 35,469,985 -  35,470,266 ( + ) ;   282 (bp)
Exon 14 Location 35,470,348 -  35,470,484 ( + ) ;   137 (bp)
Exon 15 Location 35,470,569 -  35,471,012 ( + ) ;   444 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI		 UniProt
Accession No		 UniProt Entry
Name
Os02g0809800 Os02t0809800-01 J023079I02 211162 J023079I02 13744 LOC_Os02g56510.1 AK100323 7143 AP008208.2 255670529 BAF10378.1 113537995 NC_008395.2 297600179 NM_001054999.1 115449426 NP_001048464.1 115449427 Q6K991 PHO12_ORYSJ


Chromosome: 2 ,  position: 35,465,722 - 35,471,012 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 gcgagatcat ccctgcctgc ctgtcccttt cctgcatcca tccatccatc ttgatcttct 
000061 cctagctcga ttccacacat gtgaacgtac gtacgtttca gttaattgtt cgatcgatcg 
000121 atcgatcagc tgctgctgct gctgctgcaa cgaggaagaa gaagaagaag aagatggtga 
000181 agttctcgag ggagtacgag gcgagcatca taccggagtg gaaggctgcg ttcgtcgact 
000241 acaagcggct caagaagctc atcaagagga tcaaggtcac ccgccgcgac gactccttcg 
000301 ccgccgccaa cgccgcagcc gcagccgacc accttctccc gccgccgccc gcagagaagg 
000361 aagccggtgg ctatgggttc tccattcttg accccgttcg cgccatcgcc gcccgcttct 
000421 ccgctggaca acagccttct gcctcagtac gtcgtcgttg tgtctcgaat caaatactaa 
000481 ctaataaacg tgtattaatt aattaataca catttctgat gttaatacgt atgtgcattt 
000541 cgcaggagga tgaggagtgc ccggacagag gggagctcgt gcgatccacg gacaagcatg 
000601 tataaaatta attagttaat ttgattgtaa ataaaactaa gtaattaaat tgattgtaaa 
000661 aatggagatg catggatgga tggtgtagga gagggagttc atggagaggg cggacgagga 
000721 gctggagaag gtgaacgcgt tctacacggg gcaggaggcg gagctgctgg cgcgcggcga 
000781 cgcgctgctg gagcagctcc ggatcctcgc cgacgtcaag cgcatcctcg ccgaccacgc 
000841 cgccgcccgc cgcgcccgcg gcctcgcccg aagccgctct atgccgccgc cgccgccgtc 
000901 ctcctcgccg ccgtcgtcgg tgcacggctc cagcggccgc tacctcctct ccggcctctc 
000961 ctcgccgcag tccatgtcag gtaggtgaca ccaaccaccc acacacatga atcctgggct 
001021 agctgcacat ctctttatgc atgcaatgtc atgtcatgtc gatgtcgccg tcgtcgtcgt 
001081 cgatggcgtg ttttgcagat gggagcctgg agttgcagca ggcgcaggtg tcggagggcg 
001141 cggcggtggc ggacgaggtg atggcggcgc tggagcggaa cggcgtcagc ttcgtggggc 
001201 tcgccgggaa gaaggacggc aagaccaagg acggcagcgg caaagggcgg ggcggcggcg 
001261 gcggcggagg cggaggcgtg ctgcagctgc cagcgacggt gaggatcgac atcccggcga 
001321 cgagccccgg gcgggcggcg ctcaaggtgt gggaggagct cgtgaacgtg ctccgcaagg 
001381 acggcgccga ccccgccgcg gcgttcgtcc accggaagaa gatccagcac gccgagaaga 
001441 acatccgcga cgccttcatg gcgctctacc gcggcctcga gctgctcaag aaattcaggc 
001501 acatcttccc tcttcatctt tcctttttgc catatctgac aagctaaaac cacgaagtca 
001561 cggtatttta gaacaagact tgccttttgt gtctatgtat attgtcttct atgccatgca 
001621 tgatgcatat atatacgcat ttgtaagcta tttagaattc tgatggccaa acctcacact 
001681 aatagcatgc aactgatcga tcacactaat tgcatgcaca caaatgatat agatagtttg 
001741 gttaactgac caactaggaa aaaaaaatta agttgtttct tcatagatgt atatctaaca 
001801 aattactact atgaatatta gttgcagcat gagtcatgga gcactgtgtg agcagcacac 
001861 aactacacct gcactgcacc caagcatgca gtacagtagt agtttagtca aatttcaacc 
001921 ccgttttgca tggaagcatc cgtgtaaatc acgtagccat ccatacacca tcctgtgtca 
001981 cctgaaagcg actgtttctc ctttcaaatt actaattctt ttgtggtttt tgaaaaggta 
002041 gattaattca ccggttattt taggtggctg tctttatatt tcttttactt gtcaattatg 
002101 gtgttcttgt ggttctgacg gatttggatg cttttttggt tgcatgcatg gatggatggg 
002161 agcagctctc tcaatgtaaa ggctttcacc aaaatattga agaaatttgt caaggtaata 
002221 tactaattag ccacatctgt gcccttttga aatggatgga tggaagaatg aagagtctaa 
002281 ataatagatg ataaagatta aagaaaaccg gtctacatat ataaggcttc taggagaata 
002341 aagttctaag tgtactatta gtagtttagt accctcaaag cagaggtact agatctcatt 
002401 ctcgacagtg taatcctagt cactagtcag cctaataaca tgagacagca taaacatttt 
002461 cttgcaagga ataatttaat tttttaatat atttttttaa aaaaatgcta ctccgagctg 
002521 acagtgactg gtacgaactg ctttgcattt caggtgtccg agcaacagcg agctacagac 
002581 ctgttttcag agaaggtgaa gaggtcgcca tttagcagct ccgacaaggt atcatctggt 
002641 gctccacaat cctactgcaa agctgcacaa acatacaaat tcacttcaat cagttttttg 
002701 ggggatggaa acatgtctct ctgacgaata tgaactgaag catgcgaaat tctgaacagg 
002761 tacttcagct agcagatgag gtcgagtgca tcttcatgaa gcatttcaca ggcaatgaca 
002821 ggaaggtggc gatgaaatac cttaagccac agcagcccag aaacactcac atgatcacct 
002881 tcctcgtagg catgtagctg agcaacttca agatcagaat atcagatctg tcatctgcat 
002941 ttggcacaca aatctaactt cacttcttct tttttttcat gttctaattt gcaggtttgt 
003001 tcacgggcac ttttgtttca ctgttcatca tatacgcgat tttagcccat gttagtggta 
003061 tttttacttc cactgggaac tcagcctaca tggaaattgt gtaccatgtt ttcaggtaaa 
003121 ttcttgagaa ttacggttca gttctagggg taaagcacta tttagaaata gattttttat 
003181 tactgcgttt gtacttggta cttctgttca ggctatatat gctctgttct tgacaagagt 
003241 tcaattgatt agatttagca tgtgggctca atgtttgcaa atttttcaaa tttcagactt 
003301 aggacctcat gataataaaa gatgcaattt tacctcaaag taatgtatag atgtgacctt 
003361 gcttctgcag catgtttgct ctcatcagcc tccacatctt cctgtatggg tgcaacctct 
003421 tcatgtggaa gaacacaagg atcaatcaca acttcatatt cgatttctcc tcaaacaccg 
003481 ccttgacgca ccgggacgcc ttcctcatgt ctgcatcgat aatgtgcact gttgtcgctg 
003541 cactggtcat caatcttttc ctcaagaacg ccggtgtagc ctatgccaat gctttgcctg 
003601 gagcactcct actagtaaga aacataaact ttgggaaaat ttggtaattc agctctgttt 
003661 catgtactga ttttcagttc tcaactcgga ttctgttgtt tcagctgtca acaggtgtac 
003721 tattctgtcc atttgacata ttctaccgct cgacgcgata ctgcttcatg cgtgtcatgc 
003781 gcaatatcat attttcacca ttctataagg taaagactaa agacctcatg agttttctta 
003841 tcacaaattg ttgaaagcat ctatctgata agcaggctgc tttgacatgc aggttctgat 
003901 ggctgatttc ttcatggctg accaactaac tagccaggta atactgaaga aactgaactt 
003961 tacactagag cttttgagag ttggagctca gcatcttatg agtgaactgg tgctactatc 
004021 tgcagattcc actattacgg cacatggaat ttacagcgtg ctacttcatg gctggaagct 
004081 ttagaactca cccatatgag acctgtacta gtggccaaca atataagcat ctggcctatg 
004141 tgatctcctt tctcccatac ttctggagag ccttgcaggt atgaatcttt agatgggaaa 
004201 tactaacgat taacaacttt gtttggatca gtttcaaact aatagctgtg tcatgttttg 
004261 aagtgtttaa gaaggtactt ggaggaagga catgatatca accaacttgc taatgctgga 
004321 aaatatgtat cagcaatggt agcagctgct gttaggttca aatatgctgc aacaccaaca 
004381 ccattctggg tgtggatggt catcatttca tcctcaggtg ccacaattta ccagctctac 
004441 tgggactttg tcaaggactg gggcttctta aacccaaaat caaagaaccg atggcttcgt 
004501 aacgagctca tcttgaagaa taaatcaatc tactacgtat ccatggtact atgcttaata 
004561 tacttcattt ctgactaggc tagaaaattc cagatctagg acactaatgc cttcaaataa 
004621 ttacagatgc tcaatcttgc acttcgccta gcatggactg agagtgtaat gaagatccat 
004681 attggtaagg ttgagtcgcg cttactggat ttctcgctcg cttcactaga gataatcaga 
004741 cgaggccatt ggaacttcta taggtaattg gaagtacttt tacaaggaac atcaatttta 
004801 atttaatgtt atggtgtaac atggtgaaat ggtttatggg attgcagatt ggagaatgaa 
004861 catttgaaca acgttggcaa gttcagagca gtgaagactg tcccattacc attccgtgaa 
004921 cttgaaactg attgattaag cagtaggaca tgccggcatg ctgccaacat caaggccagt 
004981 aaggatcaga gttccaggaa tggagatgct gcttgccgct agatttggta cataagtggt 
005041 aataaagttt gcagagacca ttggtgcaca agaccatgat gttgctgatt aggatggaat 
005101 aagcttaaat cagagcagct aatcgaggca gttcgtcaaa aaagaaggaa taatcccttc 
005161 ttggtccgat gaagattgtt gggcgtcatt tcgctaacaa gatcttaatt ttgtttatgg 
005221 ttgtgttatg tatgtatctg gagatggatg cccaccctcc aaaaaaaata ttccatgaat 
005281 tcatatgcac c

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs  
Acc. No. Clone Name Length
AK252029 FLbaf140i16 2213 view details
/rice/oryzabase