cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK100097     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os02g0610500 ( IRGSP 1.0 )
RAP - Chromosome No. 2
RAP - Location, Length 24,816,800 -  24,818,264  ( + ) ;   1,465(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 24,816,800 -  24,817,584 ( + ) ;   785 (bp)
Exon 2 Location 24,817,666 -  24,818,264 ( + ) ;   599 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 RNA Nucleotide
Accession No		 RNA
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os02g0610500 Os02t0610500-01 210933 J023004D12 7192 LOC_Os02g39710.1 AK100097 3388 AK100097.1 32985306 BAG94442.1 215712315 NC_008395.2 297600179 NM_001053934.1 115447238 NP_001047399.1 115447239


Chromosome: 2 ,  position: 24,816,800 - 24,818,264 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 gtgcccaacg cccaaaaaac acagccaaac tccgcgagaa accgagctgc gagcgagtga 
000061 aacgcaccac gcgccgagcg gcaaagcgaa gcgaagaaga aatggaggcg gtggaggaca 
000121 aggcgatggt gggagtggga ggagcggtgg cggcggggta ctcctcgtcg tcgtgggggt 
000181 tggggacgcg ggcgtgcgac tcgtgcggcg gggaggcggc gcggctctac tgccgcgcgg 
000241 acggggcgtt cctgtgcgcc cggtgcgacg cgcgggcgca cggcgccggg tcgcgccacg 
000301 cgcgggtgtg gctgtgcgag gtgtgcgagc acgcgcccgc cgccgtcacg tgccgggcgg 
000361 acgccgcggc gctgtgcgcc gcctgcgacg ccgacatcca ctcggcgaac ccgctcgcgc 
000421 gcaggcacga gcgcctcccc gtcgcgccct tcttcggccc gctcgccgac gcgccgcagc 
000481 ccttcccctt ctcccaggcc gccgcggatg ccgccgcggc gcgggaggag gatgcggatg 
000541 atgaccggag caacgaggcc gaggcggcgt cgtggcttct ccccgagccc gacgacaata 
000601 gccacgagga tagcgccgca gccgccgacg cgttcttcgc cgacaccggc gcgtacctcg 
000661 gcgtcgacct ggacttcgcc cggtccatgg acggaatcaa ggccatcggg gtaccggtcg 
000721 cgccgcccga gctggacctc accgccggca gccttttcta ccccgaacac tccatggccc 
000781 acagcgtaag cctcactacc acacagctag ctctcgtcga tgctcatggc gcggcgttat 
000841 gacatggttt cctacgcgtt ccgcagttgt cgtcgtcgga ggtcgcgatc gtaccggacg 
000901 cgctgtcggc gggctcggcg gcgccgccca tggtggtggt ggtggcgagc aaggggaagg 
000961 agagggaggc gcggctgatg cggtacaggg agaagcgcaa gaaccggcgg ttcgacaaga 
001021 ccatccggta cgcgtcccgc aaggcgtacg ccgagacgcg gccgcgcatc aagggccggt 
001081 tcgccaagcg caccgccgac gccgacgacg acgacgaggc gccatgctcg ccggcgttct 
001141 ccgccctcgc cgcgtcggac ggcgtcgtgc cgtcgttctg aggaaggacg tacgcacggt 
001201 acggcgagtc ggcgacgtgc gccgtcgtaa ttttggcgcg ccccgtgcgc gcgtgcatgc 
001261 gtgcgtgtgt gcgacgcatg gccccgtgtg acatgaataa tatgtacagt agtttttcat 
001321 ccatggacgt agtattctat tgtactcctt gtactcctac tactcctctt ctgcctaacc 
001381 aaggcttgta cattaccatg ggagtagctg tttttgcaac cgtgaccatg gttcagtgct 
001441 tcaagttcaa gggcgttaat gttac

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
BJ447520 baak16b06 538
more... (Total Hit Count: 14 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ897966 whthkles14d22 603
more... (Total Hit Count: 16 )
/rice/oryzabase