cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK072346     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os02g0731700 ( IRGSP 1.0 )
RAP - Chromosome No. 2
RAP - Location, Length 31,329,850 -  31,331,797  ( - );   1,948(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 31,329,850 -  31,330,491 ( - );   642 (bp)
Exon 2 Location 31,330,586 -  31,331,317 ( - );   732 (bp)
Exon 3 Location 31,331,703 -  31,331,797 ( - );   95 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os02g0731700 Os02t0731700-01 J023048G07 208351 J023048G07 10695 LOC_Os02g49880.1 AK072346 24282 AP008208.2 255670529 BAF09936.1 113537553 NC_008395.2 297600179 NM_001054557.1 115448484 NP_001048022.1 115448485


Chromosome: 2 ,  position: 31,329,850 - 31,331,797 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 gagtgcaagt gagctgcata gatttttaga ggttttttgt ggaatcatct tttgtgctgg 
000061 gagatttctt ctgtttgttc ttttgtttcg tcgtgacgca tgagctgcag ctcggagaag 
000121 gcggccgggg ccgtgggcgg caaggcggcg cgcgcgtgcg acagctgcct gcggcggcgg 
000181 gcgcggtggt actgcgcggc ggatgacgcc ttcctgtgcc aggggtgcga cacgtcggtg 
000241 cactcggcca acccgctcgc caggcggcac gagcgcctgc gcctgcgcgt ctcgtcgccc 
000301 ccgccgctga cggcgcgggc gtcggtggag gaggaggcgg cggcggcggt ggggacgacg 
000361 acgacgacga cgtcgaagag agagggcggc gtcacgccgg catggtcgaa gcgcaaggcg 
000421 cgcacccggc gcccgcaggt caagagcgtc gggcagctgc tctcgaggcg gctcgtcgtg 
000481 ccggagatgg cggtggagtc gtcggacgaa cggaaggccg acgaagacgg agctcacgag 
000541 gagctcgagg ggcagttgct gtaccgcgtt ccggtctttg acccctccct cgccgagttc 
000601 tgctcgccgc ccccgatcga tgacgcggcg gccgcatcct catcgtgctt caaggaggac 
000661 gccgccgacg gcgccgtgga agacgcaaag tatccggcag ctgcggcgtc gtcgcccgtg 
000721 cagcagctcc cggatagctt tgtcaacttc gaaccgacgg acgccgagct gagggagttc 
000781 gccgccgaca tggaagccct actcggacaa ggcctggacg acagcaacga gctgcaggac 
000841 tcgttctaca tggagaccct agggctaata acgccgccgg tagaagaatc cggccgggtg 
000901 aagatggagc tcgacggcgg tgttgcctcc aacagcaggg tatctctccc atcatgccgc 
000961 gctcatccga agccggagga cgtcgaatcc gccgacgtgc tggacatcga tttcaactgc 
001021 acctcgccgg acgaacagaa gtcgtcggcg agcaacggcg ccgcagccga ttcgcagttc 
001081 ttccacagga gcctggatct caggctcaac tacgaggcga tcatcgagag ctggggcaac 
001141 tcgccgtgga ccgacggccg gccgccgcac ggccagctcg acgacttctg gcccaacgac 
001201 caccattact cggtacgtga tttttgcaat ttcaataccg tgtcgtccat actctcatgc 
001261 tagcgcatgc gacatgcata ctgaatcgaa aactgtgttg gtgcaggggt tgtgggctgc 
001321 gggagggggc gggcatggcg cggaggtggg gatgatgacg gtgaggccgc ggatggacgg 
001381 cccggggcgg gaggcgcggg tgacgaggta cagggagaag cggcgtacgc ggctgttctc 
001441 caagaagata cggtacgagg tgcggaagct gaacgccgag aaacggccgc ggatgaaggg 
001501 ccggttcgtc aagcgcccct ccgccgccgc cgccccgtgc gccgtcacct agacgtacga 
001561 tcgcgcacgg cccggcgcgc ggcaccatgc gtacgtgtcc ggtgtcgaga cttgcctgcg 
001621 ttcgatcgta tgcctcatgg actcgattgg cacaaaagtt cacgcaaaat ttgtcgaagc 
001681 tgcacgattc aagtagtata acgttgttca attcaaaagt ttttctcttc cttttttttt 
001741 tcggttttgt tggtgtttgg ctcggtgctt ttggatctct tttatctctg ttccatcgac 
001801 cggagagaaa gtaggcgatt gtacttgtgt aaacattggt gttcatggtt ttgtagaaac 
001861 actccataaa ggaaacaaaa tgacttgtat atgtaaactg ggttgtgcct gcgccacacc 
001921 catgtacatt gagtaatcag tacatact

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs  
Acc. No. Clone Name Length
BY864521 rbaet73g11 388 view details
Hit Wheat ESTs
Acc. No. Clone Name Length
BJ256176 whh4e09 500
more... (Total Hit Count: 4 )
/rice/oryzabase