cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK072062     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os02g0766700 ( IRGSP 1.0 )
RAP - Chromosome No. 2
RAP - Location, Length 33,132,659 -  33,137,577  ( - );   4,919(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 33,132,659 -  33,133,276 ( - );   618 (bp)
Exon 2 Location 33,134,832 -  33,134,861 ( - );   30 (bp)
Exon 3 Location 33,135,936 -  33,136,007 ( - );   72 (bp)
Exon 4 Location 33,136,471 -  33,137,577 ( - );   1,107 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
MSU ID cDNA
Accession No
RiceXPro
FeatureNum
Genomic Nucleotide
Accession No
Genomic
Nucleotide GI
Genomic Protein
Accession No
Genomic
Protein GI
RefSeq Genomic
Nucleotide
Accession No
RefSeq Genomic
Nucleotide GI
RefSeq RNA
Nucleotide
Accession No
RefSeq RNA
Nucleotide GI
RefSeq Genomic Protein
Accession No
RefSeq Genomic
Protein GI
Os02g0766700 Os02t0766700-01 208017 J013109E06 10526 LOC_Os02g52780.1 AK072062 5291 AP008208.2 255670529 BAF10139.1 113537756 NC_008395.2 297600179 NM_001054760.1 115448890 NP_001048225.1 115448891
Os02g0766700 Os02t0766700-01 208017 J013109E06 10526 LOC_Os02g52780.2 AK072062 5291 AP008208.2 255670529 BAF10139.1 113537756 NC_008395.2 297600179 NM_001054760.1 115448890 NP_001048225.1 115448891


Chromosome: 2 ,  position: 33,132,659 - 33,137,577 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 gtccggtttc ctctcctcgc ctcgccgcgg cgcccgcgtc ctcctcacca acgccagagc 
000061 tccacatccc acctctcctc aggttcccgt ctctgatccc tcgttgcgtt acggggaagc 
000121 aggcgtggtg gttgctcccc gtgcggagtt ttcgattggt ttggttgggt gagtttggtg 
000181 ctggggtgtt ggggattggt tggttggagt ttggagatgg attttccggg agggagcggg 
000241 aggcagcagc agctgccgcc gatgacgccg ctgccgttgg cgaggcaggg gtcggtgtac 
000301 tcgctcacgt tcgacgagtt ccagagcacg ctgggcgggg tcgggaagga cttcgggtcg 
000361 atgaacatgg acgagctcct ccgcagcatc tggacggccg aggagtcgca cgccgtcggc 
000421 gccgccacga cgacgacggc gacgacggcg tccgtggcgg cggcggagca cgcggcggtg 
000481 ggggcgccgc ccgttcagag gcaggggtcg ctgaccctcc cccgcacgct cagccagaag 
000541 accgtcgacg aggtctggcg cgacatgatg tgcttcggtg gcggcggcgc ctccaccgcg 
000601 ccggccgccg cggagccccc gccgccggcg caccggcagc agacgctcgg ggagatcacg 
000661 ctggaggagt tcctcgtgcg ggccggcgtg gtgagggagg acatgtcggt cccgcccgtc 
000721 ccgccggcgc cgactcctac ggcggctgct gtacctcccc cgccgccgcc gcagcagcag 
000781 acgccgatgt tgttcggtca gagcaatgtg ttccctccga tggtgcctcc gctctcgctg 
000841 ggaaatgggc tggtctcggg agctgtcgga cacggcggtg gtggtgccgc gtcgttggtt 
000901 tcgccggtga ggccggtctc gtccaatggc ttcggcaaga tggaaggcgg ggacctgtcg 
000961 tcgctgtcgc catcgccggt gccgtacgtt ttcaaaggtg ggctgagggg aaggaaggca 
001021 ccgggcatcg agaaggttgt cgagagaaga cagcggcgga tgatcaagaa cagggagtct 
001081 gccgcgaggt cgcgccagag gaaacaggtg aaaagtcctt tttgttgcaa cttgcaactg 
001141 tttagcattt acttgtcgaa ttgccttgcc ttctagtact tgcctgtagt gacatgtgta 
001201 gcacatatat tttccctttt aagcatttct tttcttttcg atgcgacaac taacaaatag 
001261 taataaccgt gagaaatgtt tatcatcatg ctgatcgttt tatttgctaa ctaggatatg 
001321 tgcctcatat ttgcaaagtt tatgctgtat ttggttcaaa catactgaaa tttaattagt 
001381 ataaacgcta taaacatatc ttttgcacgt attaagccta gcctaaaatt agtatacacg 
001441 ctataaacat aaaacaaagt ggtgtttata aaacataagc atatctttct ccttgctaag 
001501 ttgctattga tgttctaaaa ctttttgtca ttttttatgg atttaatttg tgcttcctga 
001561 tatggagcag gcatatatga tggaattgga agctgaggta gcaaaactta aggagctgaa 
001621 cgatgaactc cagaaaaagc aggtactctc catgttctgt ttacatttct agtttgagtt 
001681 ttgttcgtta taatttggaa atacttcttc atgagttgaa gtacgtagta cactttggta 
001741 atctttaaac tttcaaacat atggaattcc aatgaagcat ttgatgctgg catattattc 
001801 atttgcctgt gaactgccac tctttagatt ggggatttga tgatacgcca ttgatttcag 
001861 agggaccctt gtgtcactgt cacatggtgg caagttgcta atcatcaaac taaaaaaatt 
001921 gctgttttga aatcttaaac tatcagtttt tgttattctc aattgtcact agtttgccac 
001981 atgtccactt agtttctagc agtagtctcc agagcatttg accaagtgag gtccttacca 
002041 atagaaatat tataggtgtt ttcatatact tcctccatcc ttaaaagagt atctttttag 
002101 ctatgaacat agacaatacc actcttttag tgacagaagt tgtattgacg ctatactcta 
002161 gtgtagcccc ttactttata gtctactctt gaaattggaa actaattcta aactgacaag 
002221 ttaccatgaa atatgttcca cgcttgaaag ttagttctaa acaaaactga aggcatggta 
002281 gagtaatcaa agtcggttcc attttaaact gtttaaatag tttggtggtg gactgctggt 
002341 tagttgcttg ccttctttgt acaggatatt tcattttata aattgtaata tacgtagctt 
002401 atcatgcatc ttaattgcaa gtctaactaa aatagtactt atgaatgttg cattgcaccc 
002461 acacccacaa ttgtgattat ttcattttgc actgtcttat tacattcttt gaggtttgcc 
002521 cttgttttgt ccgcctttca tggtaagtac ttctgagaag gaaaacaaaa gaaaggcttt 
002581 acatgattca aacataagtg ccttaagacc tgacaattct attcccttag gatagtggac 
002641 tagtaggcag tagctactct attcatttga ttatgcttta gcatttgaac ttatttttat 
002701 gtattctaat gtgcaggatg aaatgttgga gcagcaaaag aatgaggtaa ttgcttatct 
002761 tggaaaaaaa atcttttgct ctggataggt actatgtttt gcttattaat gtcaaacaag 
002821 aaacaaaacg aagctgtgca acctaggcat gctctgtttt actgatagct tacttgttta 
002881 ccaaaaagtt ttactctgta aaatctgata gttttaccct ttacatgagt attacagcct 
002941 aatctgtcaa tatcatacat atgctctgct ctatgattat ttttcgctcg taatgtatgg 
003001 tgtgaatttt aacaattatt gttaggaaaa tgtatgctgt gtatattaac aattattgat 
003061 tcacttgttt gaatgtcaaa cgttatgttc tgattgatag ctactggtcg tgagttttgg 
003121 ctttcacact attaccttat agtatgggat tttaagcaat gatgaagtaa agctttgtgg 
003181 ggggttgaga aataatgagg caaggactga tgtcgatgtg attgattgca ttttcctaca 
003241 tcaggggtta ggtggcagca tttaaatggc ttaaactaaa aaagaaattc tttgaattga 
003301 tcagtcaact gccatcattg ttgaattata accatttaaa tgatatttca tctataataa 
003361 tacagtttta actaaatgca acattggaag ggcaagcaaa tattaaagtt tattcaaaaa 
003421 acagttattt gatgtgtgta tagtttaatg cctatgtttc catcgtagtg gggtataact 
003481 gtattttcca caacataaca cttaaaaaag ttatgacagg atagacaatt gtgaaactgt 
003541 caatattgtt tgttacaatc aatttaactg acaattttga ctgaacttta catgaagtta 
003601 acacatctct caacactgta aaatctgtgg atacctcctt aggccaatcg ttgtaaactc 
003661 tgctgagaag actgactgtt ctctgtaaaa agggatatgt tctcataaca ctgaggcggc 
003721 agaatttcaa accgcactcc ctccatgtcc tagttgtttt tccacatctt agaccactag 
003781 tttgaatgtg tacagaagct aagggagtgc cacaaatggt ttgaaactta gaatcatcag 
003841 ttttttagag gctactctaa ccctgaaaaa atgtggattg gacaaaaact gaattactga 
003901 atgcttgctc taactaatac tggtatgtag cacacatact tggtatttct atttctgaga 
003961 aagagcctct tgtagactct tgccacttct actcgacata attgtatttt ggtaaaaagg 
004021 aaaacaatgg agcctctgat gttatcataa actgtacaat tcatttttga aaaagcaaat 
004081 caccactcaa ttctatttaa tttatgttgt cctttggttg ggttttaatg acttcaaaat 
004141 ggggttcctt atttttctgt cagcatacta tctgacaatt gttcctggta aatttgggag 
004201 agaagtttcc aagcttttcg tttcctagtt tgagattttc ctctggcttc aagacaccac 
004261 cgcgtaaaag tctaataatg cactgttaat ggtttctgca ggttctagag agaatgagcc 
004321 gacaagttgg accgacagca aagagaattt gccttcggag gactctgacg ggtccatggt 
004381 gatcgaagct aaaggcctag ttacctgtaa ctagaacaca gtcctttcaa tgtgagcagt 
004441 gatcatagta gttgtaggat ggtgaagctg aagacctggt tacctgtaac tagaacacag 
004501 tcctttcaaa gtgagcagtg attacagtag tagtaggatg gtgaagctgc cagttacctg 
004561 taactagaac acagtccttt caaagtgagt atagtagtag gttagttcag aatcgccaga 
004621 tcgatctgcc cttgtaggcc aaccattagt ccgtgggctt gtctcttggg cggacaggct 
004681 gcctgagata ttcactcgat aggttttagt tgtctgagtt atatccaagc attgtatgta 
004741 acctatttaa ccatggtgcc tgctacctgt attgtatttt gctgctgtag gaacctatgt 
004801 cggtgttacc atcttgttct taatttgtgt acttctcttg ccattttgga taagatgtat 
004861 ctgaacttat acatatgtac ttttccttgc cattttggac aagatgtatc tgaatttac

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Wheat ESTs
Acc. No. Clone Name Length
BJ267580 whoh12e16 713
more... (Total Hit Count: 11 )
/rice/oryzabase