cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK070982     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os02g0810900 ( IRGSP 1.0 )
RAP - Chromosome No. 2
RAP - Location, Length 35,529,357 -  35,532,310  ( + ) ;   2,954(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 35,529,357 -  35,529,787 ( + ) ;   431 (bp)
Exon 2 Location 35,530,840 -  35,531,126 ( + ) ;   287 (bp)
Exon 3 Location 35,531,499 -  35,532,310 ( + ) ;   812 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os02g0810900 Os02t0810900-01 J023075A01 206830 J023075A01 6096 LOC_Os02g56600.1 AK070982 1392 AP008208.2 255670529 BAF10386.1 113538003 NC_008395.2 297600179 NM_001055007.1 115449460 NP_001048472.1 115449461


Chromosome: 2 ,  position: 35,529,357 - 35,532,310 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 acacaatcgc caacctatac agatatatgt gctagctact tccaagttcc tacctatcaa 
000061 tttctctcct cctcttcttc ttctctgcat caatctgcag cttaattctt agctatgtac 
000121 atatagctag ctaccacttc caaaatactc cacagagatc aatcacatat agatatagct 
000181 agattgctat agacagagag atcatcaaag aaatttagca ggtgatagcc acatggggtt 
000241 gagggacatc gagctgacgc tgcctccggg gttccggttc tacccgagcg acgaggagct 
000301 tgtctgccac taccttcata acaaggtggt gaaccagcat cgcttcgccg gagttggagg 
000361 agccgccgcc gccggcggcg gcaccatggt cgaggtggac ctccacaccc acgagccgtg 
000421 ggagctacca ggtaatcact tactcaatca aaattaatta attaattact actccttttt 
000481 cctctcccac aagcgaccct ctcactagct ccaaatcatt tatagctaat gtaatagtca 
000541 attcatacaa tagttgctta ctgtactatt aatacctggt cctacctgtc atacacatat 
000601 tacgtcttag agtccgtgct acagctgact atatacctat agtctcctgc tcttctctct 
000661 cttcctttat ctttttaaaa tatgtttata gctggcttat agcttgctat tgtacctgct 
000721 cttagccacg cgccctctct ctcccctctt ctgcatgatt atggttaatt aaatcgtaga 
000781 tggttcctcc gtttccatgg aatgattaat tacgcacgca accacgcttt attggctcca 
000841 attaggattg tcgttattct tcccccttgt taattaacca acaaggcacg ggtcgatcca 
000901 tcacgtatat ctctgtgcgc gtatgtgcaa cagtgtgtta tatattgctt ctggtgcaag 
000961 catacatata cctatatcta taatttattt ctttatgact gcaagtgggc tatctaagct 
001021 ctagctatag cttgttctct ttgtctctta cgattacgat caaatttccc atcaattttt 
001081 atacatgttt aaaatttaac ttatttcatt ccatatcaac attttcttca ggacatacta 
001141 ctatatgtgt gcataaactc tccttaattt ccccgcgcgc cggcccatcc tattctcaaa 
001201 aaaaaaaaaa ctgagaacaa taaaaatata cataatattg aaaaagatta aattaaccgg 
001261 tttgtttaat ttccctcaat caaatcgatc tgctttccaa aatttctgaa taattaacgg 
001321 tatttcttta caaaactgca ggaacaagtt taatcagaat catatcgaac aattaatcaa 
001381 gtagctagta ttataccaca tactgaatat attacggttg atctcagatt agtctagatt 
001441 aatcgagttg tgatgtgaaa aattaattat ggtgtgcatg cagatgtggc gaagctgagc 
001501 acgaacgagt ggtacttctt cagcttccgc gaccgcaagt acgcgacggg gctccgcacg 
001561 aaccgcgcca ccaagtccgg ctactggaag gccaccggca aggaccgcgt catccacaac 
001621 cccaagctgc acgccgccgc ccaccgccgc gcctccatcg tcggcatgcg caagaccctt 
001681 gtcttctacc gcggccgcgc ccccaacggc gtcaaaacca actgggtcat gcacgaattt 
001741 cgcatggaaa accctcacac ccctcccaag gttagtcctc acaatccaac taatttctcc 
001801 aataatttcc ttactccttt catcctcaaa taaataaaat ccagcacggg ttatggtaag 
001861 acctgtttag tcaaactgtt ttaagtttaa ccaagtttgt agaaaaaata ataatatttt 
001921 taacccatga caaatttatt aagaaaatta attcaattat tgatttgata aactaattta 
001981 gtatcataaa tattactata tttatctata aaattagtta aacttgaaat agtttgactt 
002041 tattagagtt aaaacgtgtt ataacctgaa ggagtatagt agtaactttt ggttaatcaa 
002101 gagcttgagt ttgtgtgttt aattttgcat atgtgtatgc aggaggattg ggtgttgtgc 
002161 agagtgttct acaagaagaa ggcggagacg gagacggagt cgtcgtacag catggagaac 
002221 gagcaggagg cggtgatcgc catggcacgg agcgccgcgg ccatcaaggc gggtggatgc 
002281 tactccaact cctcctcgtc tcacgaccca gccgccgccg gccatcactc gcccccgcca 
002341 ttcccggcgt cgctcgccgc ctgcagcagc agccaccact acagcagcca cccaccgccg 
002401 cctcccgatc accaccacca ccaccacatg cccgtcaccg gcggcggcgg cggctccctc 
002461 aacgagttca tccccaccac cagcatggcg ctgtacagca gcatcttcga cttcagccag 
002521 catctcgacg gcggcgccgt ggcggcgtcg gcgtcggcgg cgggatcgag ggtcgacggc 
002581 ggcgagcagt gcggtctgat ggagctaggg ctcgaggagc actacaatta caacggcctg 
002641 atgccgatgt gacgatccac cataggtgtc ggtgctgcta gtgctagctt agctagctta 
002701 cacacactcc cagctgctag ctagctgcag ttctgcagcg cagctagcta gcgtttatta 
002761 ttaataacct cttttcacct cgattgtttg atctgatttg tttcgtggtg atcgattcca 
002821 tcgatcagct tgtgcagatt tcgttgattg tgcatgcaaa catgcgcacc tgtgtatagg 
002881 gtatagtggt acgtcgtata gcgctgttgc attgtttgga ggtaaattat atatcttagc 
002941 ctttaatttg attg

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
AK248480 FLbaf7e16 1281
more... (Total Hit Count: 6 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ681216 whok3i10 772
more... (Total Hit Count: 13 )
/rice/oryzabase