cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK070197     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os02g0669100 ( IRGSP 1.0 )
RAP - Chromosome No. 2
RAP - Location, Length 28,021,511 -  28,022,895  ( - );   1,385(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 28,021,511 -  28,022,418 ( - );   908 (bp)
Exon 2 Location 28,022,513 -  28,022,895 ( - );   383 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 RNA Nucleotide
Accession No		 RNA
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os02g0669100 Os02t0669100-01 J023042N13 205971 J023042N13 5371 LOC_Os02g44870.1 AK070197 21006 AK070197.1 32980221 BAG91823.1 215687258 NC_008395.2 297600179 NM_001054224.2 297599730 NP_001047689.1 115447819


Chromosome: 2 ,  position: 28,021,511 - 28,022,895 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 atccgaaagc aaaagcgact cgtcacagct caaacaagtc aagagcgaat agttcttgct 
000061 gatctgttgt ttgattactt tagttctcga gaggctttag ctgaatccat cgatcgatca 
000121 tggaggatga gaggaacacg gagagccacc agggtggcga ggctgcagag caggtggagg 
000181 tgaaggacag gggcctcttc gacaacctcc ttggcaggaa gaaggacgat cagccggagg 
000241 agaagaagca tgaggaggag cttgtcaccg gcatggagaa ggtctccgtg gaagagccaa 
000301 agaaggagga gcaccacgcc gagggcgaga agaaggagag cctcctctcc aagctgcacc 
000361 gatccagctc cagctccagc tcggtaagtg cacacatgca tgatctagct ttaattagtt 
000421 acagactttt tagtaattat agaaggtttc atgaccttta atcgttgtgt gcaacagtcg 
000481 agtgatgagg aagaggaggt gatcgatgac aacggcgagg tggtcaagag gaagaagaag 
000541 aaggggctca aggagaagat caaggagaag ctgcccggcc acaaggacca tgccggtgag 
000601 catgctcctc cgcccgcggc gacgggcttc cccgcgccgg ctccgcctgc atccgtggtg 
000661 acggccgcgc ccacgccagc tcctgctccc gtggtgactc acggcgatca ccaccacgac 
000721 accgccgtcc ccgtggagaa gatcgagggt gatcacgcca agacggaggc gaccctgcca 
000781 cgtgcacccg aggaggagaa gaagggcttc ctcgacaaga tcaaggagaa gctgcccggc 
000841 ggccacaaga agccggaaga cgcaactgct gtgccgccgc cggccgcctc accggctgct 
000901 cctgccacta ctccggcgcc agcacaccca ccgccggcta cagaggaagt gagcagcccg 
000961 gatgggaagg agaagaaggg tatactgggc aagatcatgg agaaactgcc cggttaccac 
001021 aagggctccg gcgaggaaga caagaccgcc gccgccgcca ccggcgagca caagagcagc 
001081 gcttaattgg ggcgtgtgtg agaccaggcc atggttggaa tttggaagtg tttggcgtgt 
001141 gttagtttgg tgctttttct gcactgcagc tttgttaagt tcgtgtcaag attggtcaag 
001201 gcctggtcag cgaagcccga tcagtgatcg aagtttgtgt ttcgtgtggg gtacgggctt 
001261 cagtttgcta tagtcaagta ctagatgttg agtttgttta attattattg gcactcttgt 
001321 attggttttg ggctgggcat tctgccttgg tattaatgat ttctgcccag aatatattgt 
001381 tgcct

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
BY844757 bart10h05 551
more... (Total Hit Count: 90 )
Hit Wheat ESTs
Acc. No. Clone Name Length
BJ212702 wh18l03 548
more... (Total Hit Count: 330 )
/rice/oryzabase