cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK070041     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os02g0169300 ( IRGSP 1.0 )
RAP - Chromosome No. 2
RAP - Location, Length 3,727,548 -  3,731,214  ( + ) ;   3,667(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 3,727,548 -  3,727,618 ( + ) ;   71 (bp)
Exon 2 Location 3,727,729 -  3,727,936 ( + ) ;   208 (bp)
Exon 3 Location 3,729,115 -  3,729,192 ( + ) ;   78 (bp)
Exon 4 Location 3,729,292 -  3,729,552 ( + ) ;   261 (bp)
Exon 5 Location 3,729,921 -  3,730,238 ( + ) ;   318 (bp)
Exon 6 Location 3,730,527 -  3,730,685 ( + ) ;   159 (bp)
Exon 7 Location 3,730,768 -  3,731,214 ( + ) ;   447 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os02g0169300 Os02t0169300-01 205807 J023036N24 5229 LOC_Os02g07260.1 AK070041 14089 AP008208.2 255670529 BAF07934.1 113535551 NC_008395.2 297600179 NM_001052555.1 115444480 NP_001046020.1 115444481
Os02g0169300 Os02t0169300-01 205807 J023036N24 5229 LOC_Os02g07260.2 AK070041 14089 AP008208.2 255670529 BAF07934.1 113535551 NC_008395.2 297600179 NM_001052555.1 115444480 NP_001046020.1 115444481
Os02g0169300 Os02t0169300-01 205807 J023036N24 5229 LOC_Os02g07260.3 AK070041 14089 AP008208.2 255670529 BAF07934.1 113535551 NC_008395.2 297600179 NM_001052555.1 115444480 NP_001046020.1 115444481


Chromosome: 2 ,  position: 3,727,548 - 3,731,214 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 acatcgcaat ccaaaccttc gtcttcgtct tcctctcgcc gctgattcga ttcgatccga 
000061 tccgatccaa ggtgagttcc ctcctccgat cgcgcgctcg atcttggatc cgcgggtgcg 
000121 gaggattgct gtgtgcttcg cgggatctcg tttgacgctc gcggggccgg atttggtgca 
000181 ggggagggga agcaatggcg acgaagagga gcgtggggac gctgggggag gcggatctga 
000241 gggggaagaa ggtgttcgtg cgggccgacc tcaacgtgcc gctcgacgac gcccagaaga 
000301 tcaccgacga cacccgcatc cgcgcgtccg tgcccactgt caagttcctc ctcgagaagg 
000361 gcgccaaggt catcctcgcc agccatctgg tcagtgagca ccccctgcca tcgatccttg 
000421 accctcccgc gctttcgatc tgcaaagtgg catgctactt tagatttttt tgggttctag 
000481 gggtggatga tatttggtcg ctagtactgg aaggaattcg gatcggaagc taccatttgt 
000541 gtagatatga gtaactttgt cagggttgta gtgatcaacg taggattcga tatgatcgag 
000601 gcaaaggcgg cccaattttt aaaatgaaaa tcgatctctt atttgtttgt gttgtttaaa 
000661 tagatttgca ttatgacaga ctgacataac ggacttgact taattaatga actgttagac 
000721 gaggtactcc agatgtgcta ctgtttgttc tttattgtga tcagtgcccg aaatgaactt 
000781 tgattgtgat gacttggacc agtgcattgt ttaatgctct tgctgacctt tgtgcttgcc 
000841 ttccattttg gttgggtacc atgactatct atttcttcca ttatattagt acgtttttaa 
000901 attttggatg actaataaga gttgtactag cataataata taatgaacat taaaagtatt 
000961 cagcatggag gtttgacctt tagtgtaatg gggtaattaa tgggtttgat gatgattgtc 
001021 ttgtcttctg ttgttttcag acaatgcaag ttccttgtct ataattgatc atcaaatttt 
001081 tgtataattg atcattaaat gtttgttagg taggaaatag tggttaaacc tgatcacaga 
001141 gacatgtcaa gtttgtgctt ctgcatttca catgtatatt tcatccagca cttatatctg 
001201 tttcatttca ctcacaagca cttatatctg ttccatttct ctcttgtgag tgttgtttca 
001261 tggattggat aacatgatgg catagtggtc tgataaccaa aacttcactt ttttgggcta 
001321 aagttttgtg ccatgagaac ctccagtaga atatatcaat ttcaggagta tccaaaccaa 
001381 aacggttatg ttgtatattg tacaacaagt tgacaaataa gcaactttgt gttgtagctt 
001441 ttatatgcag aagagtttat aatgcttgtg gtgcgtactg tgaacaaaac agaatggatt 
001501 actaatcaac tgtaagctct taactgttgc ttttcattct aacatgattc acttttgtaa 
001561 cctccagggc cgtccgaagg gtgtcacccc caagtacagc ttgaagcctc ttgttccacg 
001621 cttgtctgag ctacttggag tcgatgtatg ccattggatg atagctgtta acagttaatt 
001681 tttgttattg ttgaactaga caacagctct tgtattcctc tgatctattt gtgtgcataa 
001741 ataggttgtg atggccaatg attgcattgg tgaggaagtt gagaaattgg ctgctgcttt 
001801 gccggaaggt ggtgttctac tcctagagaa tgttagattc tacaaggagg aagaaaagaa 
001861 tgatcctgag tttgccaaga agcttgcagc tgtcgctgac ctctatgtaa atgatgcttt 
001921 tggcactgca cacagagctc atgcttcaac tgagggagtg accaaatttt tgaagcctgc 
001981 tgttgctggc ttcctgatgc agaaggtatt gccaaaatga agtctccatc ctggtcaatg 
002041 tttgcttaaa tatatattcc tagtaataca taggtcccgt ggtaataact cataattagg 
002101 aattgaattc atatacatta ttcacctcaa tcctcaacca acctagtttg tattcatttc 
002161 aaagaagcaa taccaccctt aggattggca accacccaat agtccaccga agagtttgtt 
002221 actttaggag taggaaataa catggaatat tagagagaag tttataagta aattaatatt 
002281 tttttaatct tcaatgtatt ctccaaaata tgttgcataa tgcttatttc agaataaaaa 
002341 atacaactgt actgatatgg ttaattattt caggaacttg actatcttgt tggagctgtt 
002401 gcaaacccaa agaagccatt tgcggccatc gttggtggat ccaaggtctc aactaagatt 
002461 ggggtgattg agtctctgtt ggcaaaggtt gatgtcctca tccttggtgg tggtatgatc 
002521 ttcacattct acaaagccca gggatatgct gttggaaaat ctcttgtgga ggaagacaaa 
002581 cttgagcttg caacttcact tattgagaag gcgaaggcga agggtgtttc tctcttactt 
002641 cctaccgatg ttgtagtggc tgacaagttt gccgcagatg ctgaaagcaa ggtttgttca 
002701 tttacacagt tctgcaaatt acattttgct ccttactagg aaactaaagt agttttaaat 
002761 ttaaaataac aggtggttgt tgatgtattt catttcaagc atcatacaag taatgatcga 
002821 ttaatatatt ggcatttcag cctccatcat gatatcataa attcgaaaat gtttgtccct 
002881 gtggatggca acatccagta atattcatgg tgcatagtac taaattatta caaactttta 
002941 tgtccgttgt tttgatgtcc actataccat cattttcaga ctgttgctgc ctccgctatc 
003001 cccgatggtt ggatgggtct tgatgttggc ccagatgcca tcaagacttc cagcgaagca 
003061 ttggacacct gcaacactat catttggaac ggacctatgg gagtctttga gtttgagaag 
003121 tttgcagcag gcactgatgt tagtacaatt gactcacatc cgctgatctc ctgcattttc 
003181 tttctttttt ctgtcgctaa acattctcgt ctttcatcag gcaattgcca agaagttggc 
003241 tgatcttact accacaaagg gcgccacgac catcatcggt ggtggtgact ccgttgctgc 
003301 ggtcgagaag gctgggctgg ccgacaagat gagccacatc tccaccggcg gtggtgctag 
003361 cttggagttg ctggaaggca agaccctccc aggtgttctt gcccttgatg aagcgtaagc 
003421 taattcggct tgtctccatc agcagtctgc acttttgttt cagacctctc ggtgtaactt 
003481 tgcaatgtca atgcttgtat gaagaacttg agataggctt atcgtcaagt tttgctagat 
003541 gagtcgtgaa taagcttttc gacttcctcg ctgccgcgag tgaagtggtt cgaactgaca 
003601 tacatactct catggatcga tattttgata tgcggttatc acatccctat gatggcatca 
003661 tctgttg

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
AK251528 FLbaf128e24 1541
more... (Total Hit Count: 143 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ778530 whatl26h13 891
more... (Total Hit Count: 479 )
/rice/oryzabase