cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK067143     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os02g0102300 ( IRGSP 1.0 )
RAP - Chromosome No. 2
RAP - Location, Length 124,645 -  127,131  ( + ) ;   2,487(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 124,645 -  124,893 ( + ) ;   249 (bp)
Exon 2 Location 125,030 -  125,128 ( + ) ;   99 (bp)
Exon 3 Location 125,379 -  125,456 ( + ) ;   78 (bp)
Exon 4 Location 125,854 -  125,920 ( + ) ;   67 (bp)
Exon 5 Location 126,038 -  126,091 ( + ) ;   54 (bp)
Exon 6 Location 126,816 -  127,131 ( + ) ;   316 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os02g0102300 Os02t0102300-01 J013095M22 202641 J013095M22 2464 LOC_Os02g01220.1 AK067143 32675 AP008208.2 255670529 BAF07510.1 113535127 NC_008395.2 297600179 NM_001052131.1 115443632 NP_001045596.1 115443633


Chromosome: 2 ,  position: 124,645 - 127,131 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 gtgcatctcg ctacctaacc tagctaacct cctctcttct tcttcttctt cttcttcttc 
000061 ttcttcttct tcttcttctt cttcttcttc ttcttctagg ctagcactgc acgtgcccaa 
000121 ctaacacata cattcatcat atatacacct cctcctcctt cttcctctaa gttgtgtgtg 
000181 catatataat ctactagtag agagcagggc taggctagca attgcaatgg cgcctcccta 
000241 tgaaaccagg tcagtcagat cagaattata tatatttatg tactaattca tgacctgcta 
000301 gcaactagat agtaaaagag ttataatcta tatatatgaa gaaattgaaa tctcggtata 
000361 tatgtatctg ccttaatgca tgcagcgccg ccggctctga atcgccggtg ccggtggtaa 
000421 cggtggatgt ggcggcggcg agcgacctta tcacctcggc cggccaccgt tacgtcgacg 
000481 tcaggtacta ctacctatct gtctgtctgt ctttgcatcc tcccctagct atatctatcg 
000541 atatcatgta ggagtatatg aatatcagga tatatatgat ccatccttaa ttaatttctt 
000601 catgcatgag caacgagagc atatatatat acctcctaat taatttgttg gagaaatgaa 
000661 attacagcac atgcatgact atgtgtgctg gtatcttcgt ctgattgata gagcaattaa 
000721 acatgattat gcaggacaga ggaggaaatg aacaagggcc atctacacaa ctccctcaac 
000781 gtgcccttca tgttcgtcac gccgcaaggc aagtcagcca gccgattaat tcactttaat 
000841 ctgtccagat ttttacacca tttttcatcg tcgtccaaat aactagcgta atcaatatat 
000901 atactcttat gattcaatac tagtacttta agaatttgga acaagaaatt ctgtctacac 
000961 atatcgatct cgttctcgct caaacatatc catccactcc tatcattttc atgaatagta 
001021 atttcccact acaaaacgat atactactat atgcatgatg cttctggttg ttgggttgtg 
001081 tctgtacctg ggcatgttga gcatctgatt tatgaacgtg gacgtgtgct cgtccaggta 
001141 catacggggg gagtaattaa caagcatgat tatatttatg agcgttatta tcatccatgt 
001201 tgcagggagg gaaaagaatc ctctgtttgt ggagcagttc tcgtcgctgg tgagcaaaga 
001261 ggagcatgtg gttgtggtac gatacgaatt aaaattaaaa ttccccaaaa aaatatttat 
001321 ttgacaagaa ataatatatg tgctcgatct aattgacgaa ccttgtaata aaaataaaca 
001381 atccaactat taggggtgcc aaagcgggaa gaggtcggag ctagcatgcg ttgatctcct 
001441 tgaagcagta agtttgatgt ttttaatcaa acacgtacta gttgcacttg tacttgatcg 
001501 accatcatct ctctctacgt ttctcattgc cttgttgatg gctctgtctc ttgttccctg 
001561 tttacttccc acacacaaaa aaaaaattac accatatcac atagaacatt tgaacacata 
001621 catacatgat taaatatagg ctaaaaaaac aactaattac gcagattgtg actaatttgc 
001681 gagacaaatc ttttaaactt aatttctcca tgatttcaca atgtgggcta caataaacat 
001741 ttgctaatga tgggttaaat aggctaaatt cgtctcacgg tttactgacg tattctataa 
001801 ttagtttttt tattagtgcc caaacaccca tgcgatacct tttataatac ccgatgtgac 
001861 acgccaaaac tttacacatt tgaatctaaa cactccctta atatacatac agtgaaacaa 
001921 ataaagtaaa ggaagacggg acaggtcatg attcatactc ctcgtctaaa aaaatgaata 
001981 tataactgga tgtaacatat tgtagtataa cgaatctgaa caacgatata ttcagattca 
002041 taatattaaa atgtttcaca tccagtttta gattgatttt ttatagaata gattggtttt 
002101 ttatggaacg gagggagagt acgagtgagt tgtaacatga ctgacataca gtatatatgt 
002161 atctgcaaca ggggttcaag aacgtgaaga acatgggagg aggctacgca gcgtggctcg 
002221 acaatggatt ccccataaac actcctcctc atacaatgta ttaacgcttt gcagcaccga 
002281 tgagatgagc gagtgataaa cacggactct actgtatcta ctgtatctca ttccaacccc 
002341 tcttctcatc tgcctgctag ccgctgcttc gtgtgccctg ccatgtatat gtatgtgcgt 
002401 cctgttttcc tgtttgttac tactggtatt atggaggcag ccaattgaat aaaattgatc 
002461 atcatgcatg caatgcacga tgcgtct

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Wheat ESTs  
Acc. No. Clone Name Length
BJ249422 rwhf10o02 405 view details
/rice/oryzabase