cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK066291     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os02g0764500 ( IRGSP 1.0 )
RAP - Chromosome No. 2
RAP - Location, Length 33,055,539 -  33,057,605  ( - );   2,067(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 33,055,539 -  33,055,870 ( - );   332 (bp)
Exon 2 Location 33,055,961 -  33,056,049 ( - );   89 (bp)
Exon 3 Location 33,056,157 -  33,056,261 ( - );   105 (bp)
Exon 4 Location 33,056,403 -  33,056,515 ( - );   113 (bp)
Exon 5 Location 33,057,120 -  33,057,252 ( - );   133 (bp)
Exon 6 Location 33,057,353 -  33,057,605 ( - );   253 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No
KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
MSU ID cDNA
Accession No
RiceXPro
FeatureNum
Genomic Nucleotide
Accession No
Genomic
Nucleotide GI
Genomic Protein
Accession No
Genomic
Protein GI
RefSeq Genomic
Nucleotide
Accession No
RefSeq Genomic
Nucleotide GI
RefSeq RNA
Nucleotide
Accession No
RefSeq RNA
Nucleotide GI
RefSeq Genomic Protein
Accession No
RefSeq Genomic
Protein GI
Os02g0764500 Os02t0764500-01 J013064F21 201710 J013064F21 1617 LOC_Os02g52650.1 AK066291 10906 AP008208.2 255670529 BAF10130.1 113537747 NC_008395.2 297600179 NM_001054751.1 115448872 NP_001048216.1 115448873


Chromosome: 2 ,  position: 33,055,539 - 33,057,605 bp

   Now loading


#
#
Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 ggcggcaaca ctgaagcaac caaaatctta cagcggcggc agccatggcg tcgttaggag 
000061 ctaacagcca tggccgagtc ctgcacacct gcacactctc cccaaagccg gttacagctt 
000121 tgagcagaag catggcggcc attcctggac accatgtttt tcagtctcca cgagctcgga 
000181 ttgcagtgcg agctagcacc gagcgtgcga cctggctgcc tgggctcgat ccacctcctc 
000241 acctcgacgg cacgtcagtt acctgaaaat ctgtaatagt gtttttctgt tctgtgtctg 
000301 atgatggcag taggctgatc agtaagtcgg catttctgta attttggttg tagattacct 
000361 ggcgatttcg gatttgatcc cctgggtctc ggggaggaac cggcaaactt gaaatggtat 
000421 gttcaagccg aacttgtgca ctgccggttt gcgatggcag gggttgctgg catccttgcg 
000481 actgatgtaa gtttcttaca tcttctgtcc attcctcgtc caatgtaatc tctttgcagt 
000541 tattagccct gagaaatcat aacactggaa gtttggtttc acagatatgg atagagaatt 
000601 ttctgaattt tcacagttgt gcaaataaat ccgagaaaaa aagaatgata cgggggatta 
000661 tctaatcagg ttgaaataga tattcagtgg aaattaaatc aaacccaata taccaacatt 
000721 gtaacacaag aatttaatat tattattttt aagggaaata atttaatatt aaacatctga 
000781 atatatcgga acccaatttt tttagtgcgc taaaagctaa aatatatatc aacgagccaa 
000841 aataaaaggg atggatatag attgatagca ttcaaacaga gcctgcccaa ttacaaaatc 
000901 caaacaagaa catgatttgc ttcttcttct tttctttttt tgaggtagct tcatggtatg 
000961 ttatgctttc ttatggcgca tggtctaaat tggctgtgtg ccctatggaa gaggtcaggc 
001021 atgtaaaaca ttttcattat ctttaaaaaa agtggcgcat ggtctaaata attgtcactg 
001081 ttctctgcag ttgatacgtg tatcaggaat caacaacctg ccagtgtggt ttgaagcagg 
001141 tgcaacaaaa ttcgacttcg ctaacaccac ggcactcttc tttgtccagc ttctcttgat 
001201 ggggtaattc agcatccaac tgaaacattt tgtcagtggt aaaagaaaag cttcaataac 
001261 tcataactca aattgtatga tgaattgatg actttacaca tcataagact gacatgttcc 
001321 catgataact ccaattccca acagatttgc tgaaaccaag aggtacatgg actttatcaa 
001381 tccaggatca caagcagagg aaggaacatt ccttggtatc gaggctgcac ttgcaggttc 
001441 acagccaggg taagtacaag aattttgctc cgaaatgaag catccaaaca atttacctga 
001501 gcaagtccat ggttgtctgc tttaactaca actactgaca ttctgaatct tggcagctac 
001561 cctgggggtc cactgtttaa tccactagga ctggccaagg atatagagaa tgcagatgaa 
001621 gcgaaactga aagaaatcaa gaatggtagc tccactttct ctaagtacag tttgcttgca 
001681 acataaatcc atagtaatag tcatagtttg ctaacatgat ctacgactgt cacagggagg 
001741 ttggctatgg ttgctatgct tgggtttatt gtgcaagcat ctgtgactca tgttggacca 
001801 atcgacaatc ttttgacaca tctttcagac ccgttcaaca aaaatatcat ccacaccctc 
001861 tcctcttctt gaaaatatcc tggaccgtca aactttttgt tcctttcttc atcttaatta 
001921 atctatcaat caacacattc acaatgttcg tggacaacat aagtaactca ctacgcaatt 
001981 gccaagtcca tgtgttatga aaatggagat tcaccggatg cataactaca ttaattgttt 
002041 atggaaaagg aaatttcctt ccctagc

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
AV910635 baak1d17 498
more... (Total Hit Count: 4 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ599856 rwhv16n20l09 700
more... (Total Hit Count: 44 )
/rice/oryzabase