cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK064910     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os02g0573200 ( IRGSP 1.0 )
RAP - Chromosome No. 2
RAP - Location, Length 22,803,541 -  22,807,271  ( + ) ;   3,731(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 22,803,541 -  22,804,285 ( + ) ;   745 (bp)
Exon 2 Location 22,804,903 -  22,805,831 ( + ) ;   929 (bp)
Exon 3 Location 22,805,921 -  22,806,762 ( + ) ;   842 (bp)
Exon 4 Location 22,806,957 -  22,807,271 ( + ) ;   315 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
MSU ID cDNA
Accession No
RiceXPro
FeatureNum
Genomic Nucleotide
Accession No
Genomic
Nucleotide GI
Genomic Protein
Accession No
Genomic
Protein GI
RefSeq Genomic
Nucleotide
Accession No
RefSeq Genomic
Nucleotide GI
RefSeq RNA
Nucleotide
Accession No
RefSeq RNA
Nucleotide GI
RefSeq Genomic Protein
Accession No
RefSeq Genomic
Protein GI
Os02g0573200 Os02t0573200-01 200172 J013000M07 171 LOC_Os02g36380.1 AK064910 41880 AP008208.2 255670529 BAF09114.1 113536731 NC_008395.2 297600179 NM_001053735.1 115446840 NP_001047200.1 115446841
Os02g0573200 Os02t0573200-01 200172 J013000M07 171 LOC_Os02g36380.2 AK064910 41880 AP008208.2 255670529 BAF09114.1 113536731 NC_008395.2 297600179 NM_001053735.1 115446840 NP_001047200.1 115446841


Chromosome: 2 ,  position: 22,803,541 - 22,807,271 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 agtttctctc tccccacaac caaaccaaaa ctaagaaacc cctgctgctc tctgcaagaa 
000061 ctccatcaaa ttccccagcc aaaaacactc agataatttt ttttattaga aaaaaagaaa 
000121 ggagattagc cagccagtct gctgctccat ctcagtgctc acgcactcac tctgaggagt 
000181 gaaatccaat ccagcccact ccggagttcc tggaaaatcc tcgcgaagtc caagaaaaaa 
000241 aatattacca ctgccatttc ttggtttctt gatagcttct cctagctgct gccgcccaat 
000301 catccgagag agcgagcaag taagaaagat tgattgattg cttgattggg agtgtccttt 
000361 gggcgagctg tggtgggatt tagcggcatg tcagcgtcgc cgtcgtcgat gagcggcgcc 
000421 ggcgccggcg aggcgggggt gcggacggtg gtgtggttca ggcgggacct gcgcgtggag 
000481 gacaacccgg cgctggcggc ggcggcgcgg gcggccgggg aggtggtgcc ggtgtacgtg 
000541 tgggcgccgg aggaggacgg gccgtactac ccggggcggg tgtcccggtg gtggctcagc 
000601 cagagcctca agcacctgga cgcctcgctc cggcggctcg gcgccagcag gctcgtcacc 
000661 cgccgctccg ccgacgccgt cgtcgcgctc atcgagctcg tccgcagcat cggcgccacg 
000721 catctcttct tcaaccacct ctacggttcg attcctatat cttcttctcg cactgcgacc 
000781 tcttcttggt caattcttcc tttttttttt aggctctgct attatgattc agacttcagc 
000841 ttagagttcc agttaaattt gttcgatatt tttccttccc tcttctcgtt taacaggatc 
000901 cattgatcca gaattccaga taggtactat atctcacaaa gggaaaaaaa aagagagact 
000961 aggctaagct tccacgaaca gcatcttgtg tgtctaccat ttatggatat ttcgcacctt 
001021 aacaccctta ctcttcacgt caaagagctc caagtatgga gagcatctac cttagacttt 
001081 cccatcaaac actccctgaa cactcggtca ccgtctccct ctttaattcc caaaagttca 
001141 tgcagccacc aacctcctca cctcctcata gcctatccaa gaactccatt aaatttagca 
001201 gttggccaag gattcaggaa tggtgtgtgt gtgctctggt ttactgtttt agcaacaaga 
001261 agaatggtta attagttaag tgtcctggtg agtggcttat cgtcagaggg atgacgcgaa 
001321 tggccaggcg cagctgaccg atcgctgtct tttggtgtgc agacccgctg tcgctggtga 
001381 gggaccaccg ggtgaaggcg ctgctgacgg ccgagggcat cgccgtgcag tcgttcaacg 
001441 ccgacctgct gtacgagcca tgggaggtgg tcgacgacga cggctgcccg ttcaccatgt 
001501 tcgcgccgtt ctgggacagg tgcctgtgca tgcccgaccc ggcggcgccg ctgctgccgc 
001561 ccaagaggat cgcgcccggc gagctgccgg cgaggaggtg cccctccgac gagctggtgt 
001621 tcgaggacga gtccgagcgg gggagcaacg cgctgctggc gagggcgtgg tcgcccgggt 
001681 ggcagaacgc cgacaaggcg ctggccgcgt tcctcaacgg gccactcatg gactactcgg 
001741 tgaaccggaa gaaggccgac agcgccagca cgtcactgct gtcgccgtac ctgcacttcg 
001801 gcgagctcag cgtacgcaag gtgttccacc aggtgaggat gaagcagctc atgtggagca 
001861 acgaggggaa ccacgccggc gacgagagct gcgtcctctt cctccggtcc atcggcctca 
001921 gggagtactc gaggtacctc acgttcaacc acccgtgcag cctggagaag ccactcctgg 
001981 cgcacctcag gttcttcccc tgggtggtcg acgaggtgta cttcaaggtg tggaggcagg 
002041 ggaggacagg gtaccctctc gtcgacgccg ggatgcgcga gctctgggcc accggctggc 
002101 tgcacgaccg gatacgcgtc gtcgtctcca gcttcttcgt caaggtgctc cagcttccat 
002161 ggcgctgggg gatgaagtac ttctgggaca ccctgctcga cgccgacctc gagagcgacg 
002221 cgctcggctg gcagtacatc tccggctctc tccccgatgg ccgtgagctc gaccgcatcg 
002281 acaaccctca ggtacccaac ttctgttctc ctccatgaga tgggaccatc tttgttgcca 
002341 ttaccatatt gatctgatgc attggtgttg tgtttcgcag cttgaaggat acaagtttga 
002401 tccgcacggg gagtatgtcc ggcgatggct gccggagctg gcaaggctgc cgacggagtg 
002461 gatacaccac ccatgggacg caccggagtc ggtgctccag gctgcaggga ttgagctagg 
002521 ctccaactat cctctcccca tcgtggagct ggacgcggcg aagaccaggc tgcaggatgc 
002581 actgtcagag atgtgggagc tcgaggccgc gtcacgcgca gcgatggaga acggaatgga 
002641 ggagggcctc ggcgactcct ccgacgtgcc gccgatcgcc ttcccaccgg agctgcagat 
002701 ggaagttgac cgagcaccgg cccagcctac tgttcacgga ccgacaacgg ctggccggcg 
002761 acgagaggat cagatggttc ccagcatgac ctcctcgctg gtcagagctg aaacagaact 
002821 ttcagcggat tttgacaaca gcatggacag taggccggag gtgccgtcgc aggtgctctt 
002881 ccagcctcgg atggaaaggg aagaaacagt ggacggcggc ggtggcggcg gaatggtcgg 
002941 caggagcaac ggcggcggcc accaaggcca acaccagcag caacagcaca actttcagac 
003001 tacaattcac cgggcacggg gcgttgcgcc gtctacgtca gaggcatcaa gcaactggac 
003061 tgggagagaa ggcggcgtgg tgcccgtctg gtcgcctccg gcagcgtcag gcccctcaga 
003121 tcactacgct gccgatgaag ctgacattac cagtagaagt tatttggaca ggcatccaca 
003181 gtcgcatacg ttgatgaact ggagtcagct ctcgcagtca ttgtgagttc acacgcacgg 
003241 taactcattg ttcccagcaa actgcgtcag tattacattg aaaaatcaca gcttacagag 
003301 taattgtctc agctggttat taaaagggtt gaaatttaat ttcaagtgca gtatctgaaa 
003361 tgaagcattc tatacgctta ctaatgctcc catttatttt atgcatctga atgtaggaca 
003421 acaggctggg aagtggaaaa ttaatgctga ttgtcagaat taatcattag gaaggtcgac 
003481 attgagaaga attcatatgt aaattatcac cttttgtttg tctatagcct tggtgtgcat 
003541 gaatcaagtg atgaagcttc cttgatgcaa taatgattat gtaaagctag ttttacagaa 
003601 catttgtggt ataggtttgc tagttgtcaa aaggatatgt actatttgtt agataagagg 
003661 ttattctagc attatgtctt agacttgtac attctccctt tggttattgt aatcttggtg 
003721 gaatagtcat c

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
AK252393 FLbaf157e15 1940
more... (Total Hit Count: 2 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ899650 whthkles1p19 572
more... (Total Hit Count: 11 )
/rice/oryzabase