cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK063464     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os02g0650300 ( IRGSP 1.0 )
RAP - Chromosome No. 2
RAP - Location, Length 27,056,133 -  27,058,101  ( - );   1,969(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 27,056,133 -  27,057,782 ( - );   1,650 (bp)
Exon 2 Location 27,057,884 -  27,058,101 ( - );   218 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI		 UniProt
Accession No		 UniProt Entry
Name
Os02g0650300 Os02t0650300-02 106460 001115H05 12201 LOC_Os02g43410.1 AK063464 21280 AP008208.2 255670529 BAH91825.1 255671134 NC_008395.2 297600179 NM_001186167.1 297721466 NP_001173096.1 297721467 Q6H3Z3 YSL15_ORYSJ
Os02g0650300 Os02t0650300-02 106460 001115H05 12201 LOC_Os02g43410.2 AK063464 21280 AP008208.2 255670529 BAH91825.1 255671134 NC_008395.2 297600179 NM_001186167.1 297721466 NP_001173096.1 297721467 Q6H3Z3 YSL15_ORYSJ


Chromosome: 2 ,  position: 27,056,133 - 27,058,101 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 aattaattgt gctcattgca ttattcttgt tagacagtcg ttgaccctaa atgaactaat 
000061 tctgcaatct gcattcatga cagattgcaa ctccatgggt ttctaaaata ttttgggctt 
000121 agcttatttt ggagcttctt ccaatggttc tacacgggag gcaatgcctg tggatttgtt 
000181 cagttcccta cttttggtct gaaagcctgg aaacaatcgt aagaattata tgctaatttc 
000241 ctaattgttc atcacagatt tatataaatt gtagcatgcg gtgacaaatt ttctaagtct 
000301 gaatttgttt ggatatcaga ttcttctttg attttagcct cacatatgtt ggtgcgggga 
000361 tgatttgctc acaccttgtg aacctctcta ccctccttgg tgcggtcatt tcatggggaa 
000421 taatgtggcc acttatcagc aaacataagg gggactggta ccctgcaaac atacctgaaa 
000481 gcagcatgac aagtttgtat ggttacaagg tctcatattt tctcaatgct taatgtaaaa 
000541 gcagatacta cttacaaaac catcagataa cttatgtaaa ttgctccttt tgcagtcgtt 
000601 tttatgcatt gctctgatta tgggggatgg cctgtaccat tttgttaaag ttaccggtgt 
000661 cactgctaag agtttacata atagatttaa ccgaaaaagt gttagcaaca caggtgagaa 
000721 aatgaaacca ttgcaaattc aactacatgg aaatggaatg cctctcacac tcttccatca 
000781 ccttaatttt cacatactca taacactgtt aatgatggct aaatgaaatg aattgcagca 
000841 tcagaggagg gtgatatggt ttcattagat gatctacaac gtgatgaggt attcaagagg 
000901 ggtactgtcc cttcttggat ggcatacagt ggttacttct tgctaagcat cattgcggta 
000961 atcaccatac cgataatgtt tcgacaagtg aagtggtact acgtgatcat agcctacgcg 
001021 ctcggcccgg tgctaggatt cgccaattcc tacggagcag ggctcacgga catcaacatg 
001081 gggtacaact acggcaagat cgctctcttc gtctttgcag cttgggctgg caaggacaat 
001141 ggcgtcatag ccggccttgt ggttggcacc ctggtgaagc agctggtgct cgtctctgcc 
001201 gatctgatgc acgatctcaa gacgggacat ctcaccttga catcgccgag gtccatgctc 
001261 gtgggagagc tcatcgggac aggcattggc tgcttcatcg cgccactgac gttcatgctg 
001321 ttctacaggg cgtttgacat cgggaacccc gatggctact ggaaggcgcc atacgcgctg 
001381 atctaccgca acatggcgat cctcgggatc gagggcatct cggcgctgcc caagcactgc 
001441 ctctcgctct ccgtcgggtt cttcgcgttc gccgtgctca cgaacgtggc gagggacgcc 
001501 ctgccggcga ggtacaagaa gctcgtgccg ctgccgacgg cgatggccgt gccgttcctc 
001561 gtaggggcga gcttcgccat cgacatgtgc gtcgggagcc tggtgctgtt tgcttggaac 
001621 aagatgaaca agaaggaggc tgccttcatg gtgcctgctg ttgcgtctgg gctcatgtgt 
001681 ggcgatggca tttggacctt cccttcttct atccttgctc tcgctaagat taagccaccg 
001741 atctgcatga agtttacgcc tggaagctaa gaggtgtagt gtgtttaatt tcatgggtgg 
001801 aggattgcag aaataaacag tgatgattaa ctgtaaatgt gtcttttggt tgtagtgagc 
001861 tgctgtttgc ctatgatcca agtcatgttt gtgttttaat ttacctatcg aattagctgt 
001921 gtttgtacac ttgtacattt tataacttga gaattgttta gtttggcat

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
BJ470821 baal26p02 508
more... (Total Hit Count: 3 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ892108 whthls33g08 634
more... (Total Hit Count: 4 )
/rice/oryzabase