Update info.cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
| General information | |
|---|---|
| RAP - Accession No. | AK061769 Link to RAP-DB ( IRGSP 1.0 ) |
| RAP ID | Os02g0666200 ( IRGSP 1.0 ) |
| RAP - Chromosome No. | 2 |
| RAP - Location, Length | 27,900,392 - 27,903,364 ( + ) ; 2,973(bp) |
| Exon (Data source : RAP-DB) | ||
|---|---|---|
| Exon 1 | Location | 27,900,392 - 27,900,785 ( + ) ; 394 (bp) |
| Exon 2 | Location | 27,901,777 - 27,902,072 ( + ) ; 296 (bp) |
| Exon 3 | Location | 27,902,432 - 27,902,572 ( + ) ; 141 (bp) |
| Exon 4 | Location | 27,903,060 - 27,903,364 ( + ) ; 305 (bp) |
| Related Rice IDs | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| RAP Locus | RAP ID | KOME Clone ID |
KOME Clone Name |
KOME Cluster ID |
MSU ID | cDNA Accession No |
RiceXPro FeatureNum |
UniProt Accession No |
UniProt Entry Name |
| Os02g0666200 | Os02t0666200-02 | 104546 | 001039C05 | 9308 | LOC_Os02g44630.1 | AK061769 | 8930 | Q6EU94 | PIP11_ORYSJ |
| Os02g0666200 | Os02t0666200-02 | 104546 | 001039C05 | 9308 | LOC_Os02g44630.2 | AK061769 | 8930 | Q6EU94 | PIP11_ORYSJ |
| Os02g0666200 | Os02t0666200-02 | 104546 | 001039C05 | 9308 | LOC_Os02g44630.3 | AK061769 | 8930 | Q6EU94 | PIP11_ORYSJ |
Chromosome: 2 , position: 27,900,392 - 27,903,364 bp |
|
|
Now loading |
|
|
|
| Sequence (Data source : RAP-DB) | |
|---|---|
|
Nucleotide
Fasta Format |
000001 accatctagc tcactcacac agtctccact cacacgcatt gcagaggaga ggcgacaatg 000061 gaggggaagg aggaggacgt gcggctgggg gcgaacaggt actcggagag gcagccgata 000121 gggacggcgg cgcagggcgc cggggacgac aaggactaca aggagccgcc gccggcgccg 000181 ctgttcgagc caggggagct caagtcgtgg tctttctacc gggccgggat cgccgagttc 000241 gtcgccacct tcctcttcct ctacatcacc atcctcaccg tcatgggggt ctccaagtcc 000301 tcctccaagt gcgccaccgt cggcatccag ggcatcgcct ggtccttcgg aggcatgatc 000361 ttcgcgctcg tctactgcac cgccggcatc tccggtcagt tcactctcct ttggcttcct 000421 cccccacctt caagatctca agtcttcaac tttgtcatga ttttgccttg gtttgtcttg 000481 ctagttgata cttacttgtt acctgcactt tgcttggctc agtagtttct tcatactagc 000541 atgctcactt tagtaaagca tgaggtatag aatcatgtgt actactactg ctccttccat 000601 aagtagcaag actttgaggc atatggcatt aacactgaat aattgatgaa agacttttag 000661 ttacctgctt ttggggtgtt agatcagtat tagtaactgg aaattcacta aatttgttgt 000721 ccatgctctt gtagttttaa agaattatta tagctttcta caggtgttga atgcaccaaa 000781 aatttatgac actacctttt gctcttgtac catcatgtac cttgtctgcg caaagatttg 000841 tcgctggcat attgtactgc tgtggtatgt gaattttgtt cttatgcaaa ggtttgattt 000901 acgactagaa gattaaggat ttaaggtcat ccgattgatt taactcttaa cccagcattt 000961 tcttcggtag tgttctaact gttgatgctg aaaccacaca aattatcaca caaaaatata 001021 ttatttttag ttcatcaaaa ttgaatgtgc acttggagcc ttggaggcaa agaaatatgt 001081 gatgccaaaa ttttctcctt ggttaatctt cctaccagaa tattaacaaa actatatgaa 001141 caagtaaata tcttgtgttg tcaacttata cagtctatca caactcgcaa tcttagaagt 001201 taatttctgt accagtttta tataatgctt caaaatctca aatactacct tgttaatctc 001261 aaaatatgaa tacatgaggg tacactatac agtcttactt caactgtcat gacaactgac 001321 cacaaaacaa ctacggcaat taagggcact actaatatcc attatattgt ctgttactgc 001381 aacaggagga cacatcaacc cagcagttac ttttgggctg ttcttggcca ggaagctgtc 001441 cctgacccgg gccatcttct acatagtgat gcaatgccta ggggccatct gcggagctgg 001501 agttgtgaag ggcttccagc agggtctgta catgggcaat ggcggtggtg ccaatgtagt 001561 tgccagtggc tacaccaagg gtgacggtct tggtgctgag attgttggca ccttcatcct 001621 ggtctacacc gtcttctcag ccactgatgc caagaggaat gccagggact cacatgttcc 001681 tgtaagtatc cttctccttt ttgcagtgtg atatgtgaaa gttcagtagt agttagtgtg 001741 gtctaatgag ttatgcactg tgataactaa ttcatcacca aaccctaaag tgataatgtg 001801 caaatcacta agcagtattt tggttagcac ctttacatac ctcactcata cagtatgcct 001861 ttaacaatga actggtgtgc tcataacttg taggtgtgcg ccatttatgg ctagactttt 001921 aactagttta atttatcatg tttgctcaag aaattgactg tatgcgtata gttactggaa 001981 gtatatatgg gttttttgtg tgttgcataa cgtatttctg tcctttgttg gtgaaaacag 002041 atccttgccc cactgccaat tggttttgcg gtgttcctgg tccacctggc caccatcccc 002101 atcaccggta ctggcatcaa cccagccagg agccttggcg ctgccatcat ctacaacaag 002161 gaccatgcct ggaatgacca tgtgagcaac ctttcttctc tttttaccta ctcgccgttc 002221 tcagcaattg gttcctctta cattatcaga tattagtcag cacatcattg ataatcgata 002281 cattttttgt tggcaaattg aggtctaagc tgataaacat gtcagtatat ataatcaaat 002341 gttctcagca attggttcct cttacattat cagatattag tcagcacatt actgataatc 002401 gatacatttt ttgttggcaa attgaggtct aagctgataa acatgtcagt atatataatc 002461 aaatgttctg atactttttt tggttatatt tttctctttg tatgggtagg tctaagatga 002521 taaacatgtc actataacca aatgtagcag catgctcttg ctaaagttta cttagtagct 002581 taccagctta ctagcctttg ctcaagaaaa gagtagaaga cacgacaaag agtttttcct 002641 tacaaatttt ggtatctaaa ttttgcagtg gatcttctgg gttggtccct tcgttggcgc 002701 tgccctggct gccatctacc accaggtgat catcagggcg atcccattca agagcaggtc 002761 ttaagccccg cgccgccgct gcgcagccga cgacatgcaa cgcaatcgtg atgtcctgtt 002821 tcccgcgcgc tactgctgcg catctgtcga ttccctctat ctctagtccc caagatgttt 002881 ttcctatctg aaccctgaac aactcaatcg tgtaatccag tactcagtca ctgtatgttt 002941 ttatgtgatg gagatcttaa ttcttaagtt atc |
Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
| Hit Barley ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| BY846726 | bart35a05 | 595 |
| more... (Total Hit Count: 681 ) | ||
| Hit Wheat ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| BJ317194 | whyf26n06 | 676 |
| more... (Total Hit Count: 947 ) | ||
