cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK060976     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os02g0810900 ( IRGSP 1.0 )
RAP - Chromosome No. 2
RAP - Location, Length 35,529,483 -  35,532,306  ( + ) ;   2,824(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 35,529,483 -  35,529,787 ( + ) ;   305 (bp)
Exon 2 Location 35,530,840 -  35,531,126 ( + ) ;   287 (bp)
Exon 3 Location 35,531,499 -  35,532,306 ( + ) ;   808 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 RNA Nucleotide
Accession No		 RNA
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os02g0810900 Os02t0810900-02 006202E09 103351 006202E09 6096 LOC_Os02g56600.1 AK060976 12288 AK060976.1 32970994 BAG87651.1 215686390 NC_008395.2 297600179 NM_001055007.1 115449460 NP_001048472.1 115449461


Chromosome: 2 ,  position: 35,529,483 - 35,532,306 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 ctagctacca cttccaaaat actccacaga gatcaatcac atatagatat agctagattg 
000061 ctatagacag agagatcatc aaagaaattt agcaggtgat agccacatgg ggttgaggga 
000121 catcgagctg acgctgcctc cggggttccg gttctacccg agcgacgagg agcttgtctg 
000181 ccactacctt cataacaagg tggtgaacca gcatcgcttc gccggagttg gaggagccgc 
000241 cgccgccggc ggcggcacca tggtcgaggt ggacctccac acccacgagc cgtgggagct 
000301 accaggtaat cacttactca atcaaaatta attaattaat tactactcct ttttcctctc 
000361 ccacaagcga ccctctcact agctccaaat catttatagc taatgtaata gtcaattcat 
000421 acaatagttg cttactgtac tattaatacc tggtcctacc tgtcatacac atattacgtc 
000481 ttagagtccg tgctacagct gactatatac ctatagtctc ctgctcttct ctctcttcct 
000541 ttatcttttt aaaatatgtt tatagctggc ttatagcttg ctattgtacc tgctcttagc 
000601 cacgcgccct ctctctcccc tcttctgcat gattatggtt aattaaatcg tagatggttc 
000661 ctccgtttcc atggaatgat taattacgca cgcaaccacg ctttattggc tccaattagg 
000721 attgtcgtta ttcttccccc ttgttaatta accaacaagg cacgggtcga tccatcacgt 
000781 atatctctgt gcgcgtatgt gcaacagtgt gttatatatt gcttctggtg caagcataca 
000841 tatacctata tctataattt atttctttat gactgcaagt gggctatcta agctctagct 
000901 atagcttgtt ctctttgtct cttacgatta cgatcaaatt tcccatcaat ttttatacat 
000961 gtttaaaatt taacttattt cattccatat caacattttc ttcaggacat actactatat 
001021 gtgtgcataa actctcctta atttccccgc gcgccggccc atcctattct caaaaaaaaa 
001081 aaaactgaga acaataaaaa tatacataat attgaaaaag attaaattaa ccggtttgtt 
001141 taatttccct caatcaaatc gatctgcttt ccaaaatttc tgaataatta acggtatttc 
001201 tttacaaaac tgcaggaaca agtttaatca gaatcatatc gaacaattaa tcaagtagct 
001261 agtattatac cacatactga atatattacg gttgatctca gattagtcta gattaatcga 
001321 gttgtgatgt gaaaaattaa ttatggtgtg catgcagatg tggcgaagct gagcacgaac 
001381 gagtggtact tcttcagctt ccgcgaccgc aagtacgcga cggggctccg cacgaaccgc 
001441 gccaccaagt ccggctactg gaaggccacc ggcaaggacc gcgtcatcca caaccccaag 
001501 ctgcacgccg ccgcccaccg ccgcgcctcc atcgtcggca tgcgcaagac ccttgtcttc 
001561 taccgcggcc gcgcccccaa cggcgtcaaa accaactggg tcatgcacga atttcgcatg 
001621 gaaaaccctc acacccctcc caaggttagt cctcacaatc caactaattt ctccaataat 
001681 ttccttactc ctttcatcct caaataaata aaatccagca cgggttatgg taagacctgt 
001741 ttagtcaaac tgttttaagt ttaaccaagt ttgtagaaaa aataataata tttttaaccc 
001801 atgacaaatt tattaagaaa attaattcaa ttattgattt gataaactaa tttagtatca 
001861 taaatattac tatatttatc tataaaatta gttaaacttg aaatagtttg actttattag 
001921 agttaaaacg tgttataacc tgaaggagta tagtagtaac ttttggttaa tcaagagctt 
001981 gagtttgtgt gtttaatttt gcatatgtgt atgcaggagg attgggtgtt gtgcagagtg 
002041 ttctacaaga agaaggcgga gacggagacg gagtcgtcgt acagcatgga gaacgagcag 
002101 gaggcggtga tcgccatggc acggagcgcc gcggccatca aggcgggtgg atgctactcc 
002161 aactcctcct cgtctcacga cccagccgcc gccggccatc actcgccccc gccattcccg 
002221 gcgtcgctcg ccgcctgcag cagcagccac cactacagca gccacccacc gccgcctccc 
002281 gatcaccacc accaccacca catgcccgtc accggcggcg gcggcggctc cctcaacgag 
002341 ttcatcccca ccaccagcat ggcgctgtac agcagcatct tcgacttcag ccagcatctc 
002401 gacggcggcg ccgtggcggc gtcggcgtcg gcggcgggat cgagggtcga cggcggcgag 
002461 cagtgcggtc tgatggagct agggctcgag gagcactaca attacaacgg cctgatgccg 
002521 atgtgacgat ccaccatagg tgtcggtgct gctagtgcta gcttagctag cttacacaca 
002581 ctcccagctg ctagctagct gcagttctgc agcgcagcta gctagcgttt attattaata 
002641 acctcttttc acctcgattg tttgatctga tttgtttcgt ggtgatcgat tccatcgatc 
002701 agcttgtgca gatttcgttg attgtgcatg caaacatgcg cacctgtgta tagggtatag 
002761 tggtacgtcg tatagcgctg ttgcattgtt tggaggtaaa ttatatatct tagcctttaa 
002821 tttg

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
AK248480 FLbaf7e16 1281
more... (Total Hit Count: 6 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ681216 whok3i10 772
more... (Total Hit Count: 13 )
/rice/oryzabase