cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK243113     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os01g0314800 ( IRGSP 1.0 )
RAP - Chromosome No. 1
RAP - Location, Length 12,006,361 -  12,007,091  ( - );   731(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 12,006,361 -  12,006,836 ( - );   476 (bp)
Exon 2 Location 12,006,968 -  12,007,091 ( - );   124 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No
KOME
Clone ID
KOME
Clone Name
MSU ID cDNA
Accession No
Os01g0314800 Os01t0314800-01 J100027C20 302474 J100027C20 LOC_Os01g21250.1 AK243113


Chromosome: 1 ,  position: 12,006,361 - 12,007,091 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 aactcaaaca agattcctga tttaccagct catttttaca tatagttcaa acttagagag 
000061 agaaagaaag ttgatcatcc atggagaggg ttgcatcgag ctgtctcagc cttctggcac 
000121 aaaggttagc tctccatgca ttcaagttgt ccatgaaatc gtttgttttc tttacaagtg 
000181 ctgtgttagt gtgttgtttt gtgtattgat ggccaattaa ttaatccgtg ggtgatgtgt 
000241 gatgatgatt tgcaggaggg gttactcggt ggcggcggcc gtggcgaagg gagccggccg 
000301 gagggcggac gagaagaagg tggcggcggc ggtggccaag cgcacgatgg cgaaggccgc 
000361 cgaggagaag acggcgtggg tgccggaccc ggtgaccggg tactaccggc cggccggcgg 
000421 cgcaaaggag gtggacgcgg cggagctgcg cgccaagctg ctctccaact ccaagaggat 
000481 ggctgccaac tgagacagat cgtcgacgta tcggtcggtc gaggctagct atgtactctg 
000541 ctttgagatg cgcgctacct agttgatcgc tgtcgctggc ctccttttga gagcttgtga 
000601 ggcctaattt gagttgcttc gttgaggacg actgcttctt tgggttcgtc ttctcggtgt 
000661 tctctaatat gaaatgagct acctttgttc agatggtatg aagattgata ataatactaa 
000721 tagaggatta t

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Wheat ESTs
Acc. No. Clone Name Length
CJ668000 whkv13e20 619
more... (Total Hit Count: 11 )
/rice/oryzabase