cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK120352
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os01g0870300
(
IRGSP 1.0
)
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RAP - Chromosome No.
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1
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RAP - Location, Length
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39,457,116 -
39,467,504
( + )
;
10,389(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
39,457,116 -
39,457,377
( + )
;
262 (bp)
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Exon 2
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Location |
39,457,923 -
39,458,070
( + )
;
148 (bp)
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Exon 3
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Location |
39,459,390 -
39,459,460
( + )
;
71 (bp)
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Exon 4
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Location |
39,460,488 -
39,460,625
( + )
;
138 (bp)
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Exon 5
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Location |
39,460,919 -
39,461,021
( + )
;
103 (bp)
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Exon 6
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Location |
39,461,215 -
39,461,251
( + )
;
37 (bp)
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Exon 7
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Location |
39,461,328 -
39,461,437
( + )
;
110 (bp)
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Exon 8
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Location |
39,461,564 -
39,461,707
( + )
;
144 (bp)
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Exon 9
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Location |
39,463,587 -
39,465,919
( + )
;
2,333 (bp)
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Exon 10
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Location |
39,466,785 -
39,467,504
( + )
;
720 (bp)
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Chromosome: 1
, position: 39,457,116
- 39,467,504
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 agcactaaaa aaatttggtg aaaaggaacg acgagccggc gacgagagct ccagaaccct
000061 agccatggcg ggagaggcag ggggagaccc ccgagcgtgg cttgccgtcg acgagacggc
000121 ggcggccttc ctctcccgct ccctctcggc gcggcccccc atcctcctcc cgccgccgct
000181 ccaccgcgct ccgctccgcc cgggcaacgt cgtcgagatc gctggcccgt ccaactccgg
000241 caagtcccag ctgcttctca cggtaagaga atccaaagct ttctccgcct aaatggttag
000301 cgaacataag gcatttagcc ctcacttagt cgtcctttct accagaactt ccctttagca
000361 aatgtcttaa gaatttcagt atctgctgca agctttgatc gaccccaatt tgttatgaag
000421 ctaatgatag tgcatatctg cattcataat ctcaatatgg gattcaacac aacttatgat
000481 aagtgaaaga aaaagagcaa tgaccgaatg acactatgct gtgcgggagt tttagaaaat
000541 cggagatatt tcgttaaatt actgctgttt ctgggaacac gggacatagg agtaatttac
000601 aaagaggggg gggggggggg ttgggagggg gattaccttg tgtgtttggt gaaaggtact
000661 agtttagaat gctataatgc ttcatgcttc ataaatcata agtggataaa ctcaatgcca
000721 ttttgacacc tatatatttt tttcaatgaa gcaatgtaaa agttaagtgt gatctgctca
000781 gtcactgagt tgttattact attgtaggct gcagtacaat gcatattacc gaaggagtgg
000841 aagggtacct attttggggg cctgggtaaa gtggtcatgt acttggatct ggactgccga
000901 tttgatgtgc tgcggctggc tcaaattctg agaaatcgca ttggagagtg ctgtggtaca
000961 gttttgcttg cattgtgaac tttgcattat taagtcatgc atcctatcca acttagagca
001021 tgttgaacat gatgcatgct tttatgggtg catagagctg actgattaac tgtgctgtct
001081 tttgttcata atgttgtagt taggaattga tttgtgtaaa tcttttatag gcttaggctc
001141 cctccactat tctacaccta catacccctc aattcttagt ggagaataac tgtgccataa
001201 atagacaaat tttgattctt attgtttcca atcctctgta attacaggct ccacaaatcc
001261 aacaaatgaa gaatttgcaa aggatggcgc tacaaatagt ttttccgaaa acacgctatt
001321 ttctgagtgc atgaagcgtt tcttgtatgc ccgttgttac aatagttcag attttatagc
001381 agctttgcag gcaagtttta tctgacaata tgtttataca cgggcacatt agcatcctca
001441 tttgtgtcct ccttttcttt aactgatggc tgacatgaaa tatgtaaaag tatataaaca
001501 gggggctata ttaaattatg cctgaccctt tgaaccactg gatgaacaag ttggtttctt
001561 taggttgtat acttgtataa ttgctgagta tgcaaaaggt tccgttgttc cttgtttaga
001621 tacagaagag tatagggcta tcatgtcagt ttgcctttct ggtaccaaat taaccaactg
001681 atcatttgct caggtgttat gttctgacag ttgacttagg catttgcagt aacatttctt
001741 gaatattcat aatggtttga caaatttttt ttgtcccata gaagacaaaa aaaaaaaact
001801 tttgccactc atgtccaaca aaattacttc attcactcat ggacatctgt tgatttctat
001861 cgtaatatat ttgtaaaact caataaatgt ataatattat gtaagtacct tttgatcaat
001921 cattaatctc gacttatggt tttcatgtat ctaaatattt aaaaatatat tgatcctgaa
001981 agttttgaaa acacatagag aatactgagt tcttgctcat tctctggaat caccttatat
002041 ttgtcatgga cctaagctta atctttatga gataatcata agatagctgt attattgaaa
002101 aacagtcaga accatgaaat gcttttgtag aatgaattac aaagaaggca acacattctg
002161 ttcccctttt atttttgtaa cagtctagga gttatgccat gtgtagataa gttatatctt
002221 aatgcgtata taagatacac gttttgttat tataactggt tgttcatttt acagaatata
002281 cattcccaat caccagcaaa gagcgaagtt cttggtgttg gcatatattt ccttatgata
002341 gacaggtatt ccttttcaag gtttcctttg tctttctatt tgttatggtc acacttattg
002401 catcttttgg tctgccgctt gtattgaagt tgtggctact ttctcaaaat gctgcatcat
002461 tcaaattttt ttaatggtat tctgcattgt tctcacataa ccatttggcc ctccggactt
002521 ttcttctgta ctttttattc ttgtagtaac tgctaaacat tttgtaacat tatccctttt
002581 ccagcattgg ctcattctac tggatggatc gtgattctca acctatcaca gagagtaaag
002641 ggtgattgcg aaaaacattt catgcagtat tagcttcata tcctcctgat tttgtcatgt
002701 gcatatatca caataacaat tagcatagat gttttaatta attattgtct cttctacact
002761 tgtaaacatg tgaataaaac aggtttaact taatacttca tctgctaaag ggtaggatgg
002821 tacaatacta cagtacatag aaagtatgca tcctcttgct atctcgcata cataaattaa
002881 aatagaagag ttacagcatg ttacacagtc acacacactc tgaatgcaat gggtagtcac
002941 tatcacttaa taattatcat tcaaaagaaa ataaatgcta cttgcatttt caactaatat
003001 tagatgcatc attattgcat atgcaacatt tacacaaaaa acatcatgaa atacagtatg
003061 gaatacacat gtacttgtaa tgatagtgct cagtggcaca gttcaaacta caaaatatta
003121 ctacaactta ggtgagaata actaggtatg tttcaattgc agtgtattgc ttaggaaaga
003181 ggattaaaat gcgtacttgt gcatgggaac actgtacaaa aacatgttag actttgttgg
003241 aaacatttac aaaattttcc aacctgaaag tatccagcat tttggattac aattacttct
003301 gccaattctg taactctatc tcactagtat ctctttgctt ttatgctaac cctttcacaa
003361 ctattcatgc aggagaactc tatcactgca gagtatgaca gaaacagttg tccaaaaatt
003421 acgcaatttt ttgcaacttc aacctgtttt ggtgatggcc accaaggcac ccatatatgg
003481 cgaaggattc actggaaatg atttccaaag gtaatatcac taccagcatg gacccttttt
003541 actgttatct gatggatgca aatattttac ctctcaaaag gatgattaag gtgtgataag
003601 gtgattcatt caggaggaaa tggcacaact aattgatcac tctgatttgt tttacatatt
003661 tttgccacca tgcatttgct ctgtttaaaa tcaacatgct tccttttgtt gcatatgtca
003721 agttctttta ctcaggatca tgatcttccc atgtgaagaa gctgaaaacc tgaaggatac
003781 tggctttctt tttgggtatt taggggtact tcaaaacaga tgttagagga ttcaacaatg
003841 agatgcatag gtcaggagga agagaaaaac atctcatacc gtgaattcat gccgtcagta
003901 tggcaggtcc gtgatcttta ttcattaaaa tgttaattct gatttcgtac aaagtattac
003961 agaacatgct aacagtaagc ttcaatcgcc atttgatttg tttgttgtat gcatatatac
004021 attgccgtgt ggccagtatc tatttatgaa tcataaccac ataactgtct aaaggatttc
004081 tgaatttgtg ttcttgcagt catttgttac acacaggata aagctacaag atttaggttg
004141 gtaaatggtc tttttatgtg gttcatgatt ttgtccttat tttcattgca tatgtttatt
004201 tgatttttac aggacaagaa gcagaacttt tctctggtca ggaaaacaag gagctacctt
004261 tacgtacttc tgagtggatg cagccttccc tcaacacaaa ggataagttt tctattacag
004321 atgtaagcta cttatatttt ttttcttttt gtaagctact tgttaccttt ctttctgtta
004381 tcaatgtact attttttttt acagtcccat gcatattttg atttagacac gtccttttcc
004441 atgatcagga tggtgttatt cttatccact gaaggttatc agggtttccg ctgatgtaca
004501 tatccaactt cctggctgga ttattgtaat ctgtggaaaa acctgtaaga gatgctaata
004561 ctctgataac acctatgact cagaaccctt aggtgagtgc agagtgaacc tccctgcttt
004621 tacagaataa atgatcttaa attttctcaa actaagaagc taatcaaacc aactagcaaa
004681 gaattcacac gtctcttaca tgaaagtcat taaatctatg ataaatcgaa tgacgcagag
004741 aaaagaggct ttgtgtttgt actgcagaaa atatatctag ataactgcag aaaagaggct
004801 tgtccatggt ctctgttaga gaactggctg tagtttattg ggttgtttta tcttcaaata
004861 tatctagcaa ataatctgac ttaagtaaaa catttctaag gttaattgaa attttaggag
004921 gcgtctaaaa caattgcagt actatacata ccgaggtata ttgtttctca ccatgagccc
004981 ctgatgcact tttctggatc acagtacaag gtggtctgtt tttttatgat acttgaaaag
005041 actattcaac gatgataaaa taactcatgt ttaatttaat tactgcaaat ttttcaccat
005101 tatacttgtt ttaatttgtt agaatgcaac tgtcatatta ttttgaagtt tactgtgttt
005161 tctcacttcc cttgatgcac agcttctgtt agtcgatctt actttgctct aatatattat
005221 tttccatact aaagcccaaa cataaactca caaaatatca tcaatgaagc aatagcagaa
005281 aaatcatgcc atttataata catgaatctg acagtgaagc aaaatgatca ggtcaccgtt
005341 tgtcttggct tttgatgttt ggcacagcat agttggactt ggaactctgt attgattgct
005401 gggaaaaagc aagccaagct tctttatctg gactaatggc tgcattatac taatgtcacg
005461 caagtttgac tattttctga ttttttaaaa cacttctatt tctgcgtggc cattaggaag
005521 tggatgcctg aaaacattag atgggggaat taaaagatat aatgcttcag agtcaccaat
005581 ttatcaggta attccttcat agccgtgcgg cagctgcagc tcacattatg cgagctgctt
005641 tctctgttag atataactta tgtagattaa ggctaatctc agtgccagaa aatgaggggt
005701 ttaggtttga ggaatatgag aatatttatg tagattggac ataaaatacg acctagattt
005761 acttgctagt ttattcaagg ccagctcaaa ttcatgaagg tttggaaatt agttctgatt
005821 gtgcttatgc tctttttttt ttccctgtta ctagatggct tgtcttatct gtcacattgt
005881 caagcactat gagaactttg tctaacatca catttgatgt gaatctttgt gtgcctgcta
005941 catatggatt tgttcttatt ttgtgagttt ctacttgagt tcctagctgt catttttatt
006001 cttttttttt gttccagcta gtgcttgtcg ctcactcata gcaagatacg cacccttctt
006061 ggtgatccct aagtataccc aaacacttta ttgcgttatt gtagttggta tagtcatctt
006121 cttgtccatg ctaggtcgct agcattgtgc tttttccact tctttttatc aattgttgtt
006181 cgtcaatcga gcatagcagc tgatgtacta gtttaacaca aactatacaa ttccacggat
006241 gaaggtgaaa tggaagatgt taacggcaat ggttactttc tgccggcctt gcaattgacg
006301 agttggtcct ccaaatatga ttgtagatgt cgcttttgtg ttttatgtaa tcatatgtgc
006361 aaatgatcta cctgagatga tgttgactaa tgttaattta gatgataatg gtatattctt
006421 gcagacgagt tctttccgac gcccctgata catatctgtt gtcttgtaca gagtacagac
006481 tttccatggc ggcatgagtg tctcgtggtg tcgtgcagta gccctgaact ctttctgaat
006541 cacgaactgg ataaagcttg attgagagag ttggcaaggt tgctgttcac attaatctgt
006601 gacccaaggt gtaaacaaag cttttggaat gcaccatgga ggtcagggtt ctccaaaccc
006661 ttttaatctc gtggaatgaa aagcaatgga ggactcatat ttgctgtagc tttcgaccgt
006721 ggagctcaca gaatcctcgt gcagaactgg gtgtagcact cactacactc catcccgtgg
006781 gagcttttgg tacgacaaag tttgcagtca tcaaagtggc agtgtaaaat ggtgggagac
006841 ttggggtgac gaccttgtaa tcttgctggt gaatctcccc ttctaaaatc ctgtagcaga
006901 tgtccaagaa tattcaacca actgctgaaa agtgaaaacg accttggatc ccatattctc
006961 attgtattgg agaggtcagc aagctgctag tgctgcaata tggaagcagg actggaggag
007021 cagaggcgat gcgtttcacc caatgcacta cgaggtcaga cagccatctg ctgccacgtg
007081 tactgctacg gtcagccgta tgcgaagcaa acaacaaccc actactggac agcaaaaggc
007141 ccagtctact tgccaatcat tcgttgctcg gccggttctg tacttctgac gatcgcaggt
007201 acaactcgtc ggcctgaaat cctgtatgct tctttacata ggattttttt cccctttatc
007261 atgcattaat cctctctcat ttgatacaaa atcgtgaaag acttgacact tcgataaact
007321 cagaatagag gatccgaatg gaaatttact ccaatttttt ttaaaaaaat taaaaataaa
007381 atagggcagt ggctacctag gacaagagca tccagccagg ccgaggaaaa tcctttacca
007441 gccaagccaa aacattcaca agtccagaag cacacaagac tcgatcactc gagtctctac
007501 gtgaatctta gcggaagata agggagcatc agtacagccc agccaatagg acgcgttctc
007561 ctccaatccc aaagccgcgc gcttggattc ttccctcgcc gatctcgcga gccccagctg
007621 tgctcgttca tcactaggct ctccctcgtg tcactcacca ttctattcgc tctcgccgcc
007681 agctgcctcg ccgcctcacc ctatatatat atctcgccgt aagttcccca tagcttcacc
007741 atcgccgtgc accgaccgac cgatctccgg ccagccggcc agccagccag ccaccgtagt
007801 cgatcgtcgt cgagagagcc gctactacgt acgtacgcac gccgcgatgt cgggggacgc
007861 gttcaacatg tcggtggcgt accagccgtc ggggatggcg gtgccggagt ggctgaacaa
007921 gggcgacaac gcgtggcaga tgatctcggc gacgctggtg gggatgcaga gcgtgccggg
007981 gctggtgatc ctgtacggca gcatcgtgaa gaagaagtgg gcggtgaact cggcgttcat
008041 ggcgctctac gccttcgccg ccgtgtggct gtgctgggtc acctggggct acaacatgtc
008101 gttcggccac aagctcctcc cgttctgggg caaggcgcgg ccggcgctgg gccagagctt
008161 cctcctcgcc caggccgtgc tcccgcagac gacgcagttc tacaagggcg gcggcggcgc
008221 cgacgccgtg gtggagacgc catgggtgaa cccgctctac ccgatggcca ccatggtgta
008281 cttccagtgc gtgttcgccg ccatcacgct catcctcctc gccggctcgc tgctggggcg
008341 gatgaacatc aaggcgtgga tgctgttcgt cccgctctgg ctcaccttct cctacaccgt
008401 cggcgccttc tcgctgtggg gcggcggctt cctcttccac tggggggtca tggactactc
008461 cggcggctac gtcatccacc tctcgtcggg tgtcgccggc ttcaccgcgg cgtactgggt
008521 ggggcccagg tcgaccaagg acagggagag gttcccgcca aacaacgtgc tgctcatgct
008581 caccggcgcc ggcatactgt ggatggggtg ggcggggttc aacggcggcg acccgtactc
008641 cgccaacatc gactcctcgc tcgccgtgct caacaccaac atctgcgccg ccaccagcct
008701 cctcgtctgg acttgcctcg acgtcatctt cttcaagaag ccgtccgtca tcggcgccgt
008761 ccagggcatg atcaccggcc tcgtctgcat cactcccggc gcaggtacca tcacactata
008821 tatgcatgct cctcatcgct tgcaccagtg caccgcccat gcttaatcta cacacagtac
008881 actaggtgat cttcgatcgt ttatactgaa aatgaatttt gggcgaaaaa aaaacattag
008941 acatgactaa ttgagtttta tacttattat tactttctcc ttttcataat ataaatcgtt
009001 ttggatgttt ttttaaaaaa aatcttttaa gtttgaataa gtttataaaa taatttagca
009061 aacatctaca aaatcattag tttcactaaa tatagcatta gatatatttt aataatacat
009121 ttgttttgta ttgaaaaata ttattatatt ttttagagtg aatttcacct gacccatata
009181 ttatggtcat aagttgcaca aaatcacaaa gtttcacaaa accacactct tgattatttt
009241 gattttggtc taccatactt ttgagttcta taatcaaatt tcaagtttat gagttattat
009301 ctatcatata aatgttacat ctatgttagt taaacttttt aaaattttga tacaggagtt
009361 tgtcaatttg gttaatggcg tagttttgtg aaactttaga actataatac ccggggttac
009421 gttccacgtg ctatggtttt gcgtaaattg gtccataata gatgatgctt tataaaattt
009481 actctatttt ttgataaact cgattaaact ttaagaagtt taactaggaa aaggtcatat
009541 gaaacggatg gagtataaac ttgaaaatag atttatctga aattttaaac cgagttagta
009601 aaatctgtat ctggggctgg gcgtaactga tccgtcttga acggcgtctg catatgcatg
009661 gtcgatcagg cctggtgcag ggttgggcgg cgatcgtgat gggcatcctc tccggcagca
009721 tcccgtggtt cacgatgatg gtggtgcaca agcggtcgcg cctcctgcag caggtggacg
009781 acaccctggg cgtcttccac acccacgccg tcgccggatt cctcggcggc gccaccacgg
009841 gcctcttcgc cgagcccgtc ctctgctccc tcttcctccc cgtcaccaac tcccgcggcg
009901 ccttctaccc cggccgcggc ggcggcctcc agttcgtccg ccaggtggcc ggcgccctct
009961 tcatcatctg ctggaacgtg gtggtcacca gcctcgtctg cctcgccgtc cgcgccgtgg
010021 ttcccctccg gatgcccgag gaggagctcg ccatcggcga cgacgccgtg cacggggagg
010081 aggcgtacgc gctgtggggc gacggcgaga agtacgactc caccaagcac ggatggtact
010141 ccgacaacaa cgacacgcac cacaacaaca acaaggccgc gcccagcggc gtcacgcaga
010201 acgtctgatg atacgtgtcg gttttttttt cttttccttt cctttttggg gttgtatacg
010261 ttacgaaatg ctgcggtttc ctgtcgtgga ataatgtggt ggtggttctg aaacgggttt
010321 cttcttcggg atgctctggt ttgatgattt cgaccattcg agatttaata cagcggctac
010381 tttcttttc
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.