cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK120308
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os01g0648000
(
IRGSP 1.0
)
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RAP - Chromosome No.
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1
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RAP - Location, Length
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27,849,422 -
27,855,846
( - );
6,425(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
27,849,422 -
27,850,656
( - );
1,235 (bp)
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Exon 2
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Location |
27,851,004 -
27,851,079
( - );
76 (bp)
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Exon 3
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Location |
27,851,177 -
27,851,374
( - );
198 (bp)
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Exon 4
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Location |
27,851,802 -
27,851,986
( - );
185 (bp)
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Exon 5
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Location |
27,852,072 -
27,852,105
( - );
34 (bp)
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Exon 6
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Location |
27,852,265 -
27,852,363
( - );
99 (bp)
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Exon 7
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Location |
27,852,459 -
27,852,704
( - );
246 (bp)
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Exon 8
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Location |
27,852,805 -
27,853,122
( - );
318 (bp)
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Exon 9
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Location |
27,853,208 -
27,853,265
( - );
58 (bp)
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Exon 10
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Location |
27,853,445 -
27,853,810
( - );
366 (bp)
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Exon 11
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Location |
27,855,273 -
27,855,846
( - );
574 (bp)
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Chromosome: 1
, position: 27,849,422
- 27,855,846
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 aagctcgatc gaagctctca cctctcctct cttctcttct cttcttccgc gacacgtctt
000061 cgccgccgcc gcagccgccg tcgggcgtcg gctctcctcc acttaccaga aaaccgaatc
000121 accgagaact tctctctcta gtattcaagg cgagagattc ccaccccgcg attcccttgc
000181 aggccgccag atttgtgggc cttgtggggg tgggcgctcc attaaacccg agagagggga
000241 ggcacgcgcg cccgccgagg ggcagcgcaa tggcgaggtg gggcgccgct cggatggcgg
000301 cgtgcgggcc gtggggccgc aaccggaggg tcggcgccgg cgacgcgttc gaggccagcg
000361 aggtgaggcg ggacgggcgc agcaggatga tgcccgcgtg cgggccgtgg ggggcgggcc
000421 atggcggcgg ggacccggcg ctcgagaggg agctgtcgcg ggacggcagc cactacagca
000481 tctccagcgc catcctcccg tcgctcggcg cgcggagcaa ccgccgcatc aagctccgcc
000541 gcttcatcat ctccccctac gaccgccgat acaggttagt tcgcaacctt ctctgtctct
000601 ctcttcccta tcgccatcac aactctcgcc gctgctttgt ttcagatttt ttttttcttg
000661 cgcagtctct tgtgtacagt cctgctatac tggctgcatt acagctttaa ttttggtgat
000721 ggtcagcgca gaagtgcttt atttttgtat tcatagttgg cactgaattg gttcgttctg
000781 cctcttgtta attccaatga gttattatat gttgtcacga aatagatggg ttgctcatga
000841 aattttgttt tttctccctc tgttttaatg gctgctttgc tgccgcaatt gtcagcaaat
000901 tgtctttaat gtgttttcgc ggaagtgaga agtagaggtt tttgttttta ctgttcctgg
000961 tttgacctcg actgaataat tgatttgtct atttcttgct ttttatagta ctcattatct
001021 ccgttttaat atggctaatt ctatggcttg tgagtgcttt atttagttat tcgattttct
001081 tttccttgag gaacgacaag aaaagcgtga ttttgatgct gacgttcctg gatttctagt
001141 actcccgttt tgcgcttctt tacgcaatgc ttcgttgtcg aaagagctct ctcacggaac
001201 tcgcatggaa aacttttttt ctgatttgtt tactgcaatt atttgccgtt ggacggacga
001261 ggattaataa ccttgtattt tagttatgga cttggtggtt ttacgaattg ttcagattac
001321 cttttttgtc ggcctcaatg acagtcttct gcaatttgaa gttattctgt gctatcattc
001381 aattaatata tttttttgtc tagtgagagt tctgttgtcc atttattatt tgatagtatc
001441 ataaaatcgc attacattaa tctccatttt tcttcggatc actctttcgg agataatctt
001501 gtatacacag tatacagtaa gtagtacggt agtttctgtg gtacttctag ttgccacttg
001561 ccaccgagtt acggccagta catatacagt accgttgaat aaacagagat tacttgtaca
001621 ggaataagaa atcacggaac tttgaacgaa agtccatcta ataccctaaa ctttaaaacc
001681 gaacatctaa ctccctaaag tttgcaaccc ctgcagtggt ttcgattttt gaacagtggt
001741 ttcgtgtatt tggatgctta taatgactaa gatgacatat ttgtatttcg tcattccttg
001801 gccgcaagtt atattatatt atgatgttat gcatataatg ctagtgtatg gatttcacaa
001861 tataaatatc ttccattcat ggtttagggg gtatatggac ttcttcctac aggaatatat
001921 tgttttttcc tttgtaagca tggtgttttt gctagtatga aaagcaaata gaaactttgt
001981 aatattgaaa tcagaagaat gagtaattct aacatttaat tgttaatact atgcagaatc
002041 tgggagactt tcctcatagt tcttgtagtc tactctgcgt gggtctcacc atttgaattt
002101 ggcttcattc cgaagcctac gggggctcta gctacagccg acaatgtggt gaatgcattc
002161 ttcgcggttg acatcattct gaccttcttt gtggcttatt tggataaaat gagctatatg
002221 cttgaagatg atccaaagaa gatcgcatgg cgttatagta ccacatggct tgttcttgac
002281 gtggcctcca ccatcccatc agaatttgct cgcaggatac taccttcaaa gcttaggtca
002341 tatggatttt tcaacatgct tcgtctgtgg cgtctccgca gagtcagctc tctgttttct
002401 aggtatgttt ttatcgtgca catatagaaa attctatgat atacattctg ttttggggtc
002461 caacatttca atctgaacct gactgaactc ggttaaaaca tagtattaat taggctagag
002521 ccactgccat ttttgccttt tcaatttgtg tagtaaactt aacacttttc actttttcta
002581 ggttggagaa ggatagacac ttcaattact tctgggttcg atgtgcaaag ctcatttgtg
002641 taagtgactg tatttatgtt attttcctgt gaagttttaa catttttgtg gaacatccca
002701 ttttctcatc ctttgatatt gcaggtcaca ctttttgctg tgcactgtgc ggcatgcttc
002761 tactatcttc ttgctgatag gtaccccgtc ccaacttcta cgtggattgg caattacatg
002821 gcagatttcc atgaacggag cttatggatt cgctacgtaa catcagtcta ttggtcaatc
002881 accactctta ccaccgtggg ctatggggat ctacatgcag aaaatacaag ggagatgatc
002941 ttcaacattt tctacatgct ctttaacctt ggtttgaccg cttatttgat cggtaacatg
003001 accaatttgg ttgtccatgg cactagtcgt actcgaaact atgtgagttc tttttgttca
003061 acctttggtt gatacttgca tctaactgct cttttaaagt ttgattctaa caagtagtgt
003121 ttgttatgtt ttgtactaaa agagggatac aatccaagca gcaacaagct ttggagtaag
003181 aaatcagcta ccacctcggc tgcaagatca gatgatttca catattagct taaaatacag
003241 gacagattca gaaggtcttc aacaacaaga gatccttgat tcactgccta aagctattaa
003301 atctagcatt tctcaatatc tgttcttcca tctggttcaa aatgtttacc tgtttcaagg
003361 agtctcaaat gatctgattt ttcaactggt aaggatagag ttctttctgt agctgtgttt
003421 ttgtagttgc gtactgttac agaatatgct tatctggttc ttttacttga tttcgttttt
003481 gaggtttcgg agatgaaagc tgaatatttt ccacctaggg aggatgtgat tttgcagaat
003541 gaagcaccca ctgacttcta catcttagtt tctggtagtg tggtaagaat actctttaat
003601 aactactttg ttatttccaa gttgatataa tactaagctt cagagagtgc agttgaaaaa
003661 gtaggagtaa ttgagctatc agtactgata tcagttttag ttatataaat ggtcattctg
003721 aaattcgagt cacttttgca ggagttagta gagcagcaaa atggtgcaga ccaggcaaga
003781 cttctgttgc tttgagactt aattccaagt gaactcgtgc atcaattggt cctaaatatg
003841 ataacttgga attctgcagg tgatacaagt ggctacgtca ggagaggttg ttggagaaat
003901 tggggttctt tgctacagac ctcagctatt cacagttcga acaagatcct tgtgccagtt
003961 gttgcgtttg aatcgtacag cttttctcag cattgttcaa tccaatgttg gggatggaac
004021 tatcataatg aacaacctta ttcaggtcta ccatttattt gttggtctct tctctgtaac
004081 atttatcgca tatgtttgca tttgtagaaa gatttttcat attcagagtg gtaacctgac
004141 cactgaaact agctctgtag taactcctaa atcgaaccac cctggaacct gcatcatctt
004201 gtttaacaat atgtgaagtt aaactagtat tccctcatat agccactaga ttatcttgaa
004261 cacagaaatt gtttattcat gtcgactgtt ctgccattat ctaaaaaata tgtcgactgt
004321 tctgcgacta tcagacttga tgttcactgt tgtctgttgt gatctggata agggctgttt
004381 attttgtttt tgcttcattg acatttatca tgctttatgt cgtgcagtat tttgagcagt
004441 actgagatcc actctttttt tttctgatgc agttccttaa agagcagaag gagaacagtg
004501 taatggctgg tgtcgtaaag gagatagaga gtatgctagc tcggggaaat ctggatttgc
004561 caattacact ctgttttgca gtaactagag gagatgattt tttgttgcat caacttctta
004621 agcgtggtat ggatccaaat gagtcagata atgacgggca taccgcactg gtcagtttag
004681 tcaactatac gtatctgtgt tgtttatttt tctatggact tatgctgacc aagaaagtta
004741 ccactttcaa atgttcatga ttaacagcat atagctgctt ccaaaggaaa cgagcaatgc
004801 gtcaggcttc tattagaata tggagctgat ccaaatgcca gaggtatgcc gaaaactgga
004861 aaattttgac agcatatagt gtacaattta actgtaagag ttaaatggta tgaacagctg
004921 gatgttatat ccaaaccctg caatatgtca tggcctcacg tcacctgtaa atcttacgag
004981 gctaaacttg cttgcaaaat tcctgttgaa ttttctacca atctaacatc tagaacttac
005041 tgatttactt aatagaattt gctccatgag tttttgcgaa gacgcaaaag ttttgtgcgt
005101 cgatgtaatt aactccatga gtgatgagtc ttatatacag atgttcaata caccatctga
005161 catgccacga ttttcttttc cattttccag actcagaagg aaaagttcca ctgtgggaag
005221 cgctgtgtga gaagcacgcc gccgtcgtgc aactattagt cgaaggcggc gcggatctgt
005281 cgtcgggtga cacgggctta tacgcttgca tcgccgtgga ggagagcgac accgagctgc
005341 tcaacgacat cattcactac ggaggcgacg tgaacagggc tcgccgggac gggaccaccg
005401 ccctgcaccg cgccgtctgc gacggcaacg tccagatggc cgagctcttg ctggaacacg
005461 gagccgacat cgacaagcag gacggcaacg gctggacccc gagagccctc gccgagcagc
005521 agggccacga cgacatccag ctcctgttcc ggtcgcgcaa ggcggcgacg gcgagtggcc
005581 accatcacgt cccaagctcc accaccacca gggtggcgcc ggcggcggcg gcggcatcac
005641 tgatcgggag gttcaacagc gagcccatga tgaagaacat gatccacgaa gacgccgacc
005701 tgcccagccg ggttctcccc gagaagctcc ggaggaagcg ggtcaccttc cagaactccc
005761 tcttcggggt catctcgtcg tcgcaggcgc agcgggagac cgaccacccg ctctcgaggg
005821 gtggcctcgc ggcgacgggc tccccgaacc cgagcagcgg cagccgcaac gccgtcatca
005881 gggtgacgat cagctgcccc gagaaaggga acaccgccgg gaagctcgtg ctcctgcctc
005941 agacgctgga catgctcctc gagctcggcg ccaagaagtt cgacttcgcg ccaaccaagg
006001 ttctcaccgt ggagggcgcc gaggttgacg aggtggagct catcagagac ggcgatcatc
006061 ttgtgctcgt cagtaatgaa tgggatgcag agaagatgaa aggcaagagc tagtaaagga
006121 gttgtgtgtt tttttttctt tttctttttt ggttgtttac tgttgatttc caagaaaggg
006181 gagatagaat ttaccccgga gtccaacggt tagctaagga ataactggaa atcattggta
006241 tagttattcc accatgaaga gatggtgaaa ttgatgggtt acgtccggtg ttcgtaagta
006301 gagaagcgta agaatttgat tttgttatag cgtgttgtga tgttagcctg tttttgtttt
006361 agttggcaag ttgatctgct ggcatgtaca gttttacgct tttctaattt ttgaaggaaa
006421 agtcc
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.