cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK110737     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os01g0922100 ( IRGSP 1.0 )
RAP - Chromosome No. 1
RAP - Location, Length 42,015,116 -  42,016,693  ( - );   1,578(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 42,015,116 -  42,016,693 ( - );   1,578 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os01g0922100 Os01t0922100-01 002170F04 113591 002170F04 19817 LOC_Os01g69290.1 AK110737 30891 AP008207.2 255672756 BAF07146.1 113534763 NC_008394.4 297598437 NM_001051767.1 115441904 NP_001045232.1 115441905


Chromosome: 1 ,  position: 42,015,116 - 42,016,693 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 ccctttcctc tcccccctcc tctccattcc catggcgtcc atggcgtcgt cgtgctgagt 
000061 tcgtcagagc tacctgctcc tgctcctgct cggtcctcac tgcgctgtct ctgagtagat 
000121 ttgcttgcgt tcttttgaga tggaagtgtt cgacgaggcg gcggtggtgg tggctgcgcc 
000181 gcctcctccg cagccggaat gcggggcggc ggcggcggtg gtgggcggcg agcccgggtg 
000241 gtcctcgccg tccccggccg cgtcgccgga gttcgagttc tggatggtgg ggaagaaccc 
000301 ctcctcgttc cagtcccccg ctctgctcac cgccgacgag ctcttctccg acggcattgt 
000361 gctcccgctc cgcaccctcc agcaggtgcc ctccggtgaa ggcgacggcg aaggtgagga 
000421 gggcgagggc gagggcgatg ccgccgccgt ggagtcctct gatttgccgg aggcggcggc 
000481 gcagcgggtc gcggagtccg ggggccccgc gccgacgccg gacctcccgg cggtgacgtt 
000541 caagtggaag gacatcttca aggcgaccgg cggcggggag tccaaggacc ggaagaaggt 
000601 ggagcgccgc gtcagcagcg tcggcggcaa cggcgagctc atcaacatca acatatggcc 
000661 cttctcccgg agccgctcgg ccggccactc cgccgccggc gccggcaccg cggcggcggg 
000721 agcggccttg agccgcaaca agtcaaatcc caatgccaat gtcaacgcca acgccagcaa 
000781 taacgccgcc gccgcagccg cagccgcagc caccgcaccg gccgccgcga cggcgccagg 
000841 gcccgcgccc gcgcgcaagg tgagcagcgc gccgtgctcc cggagcaact cccgcggaga 
000901 gacctccgcc gccgcgccgc cgccgtctat tgccaccgcc gcatgtgcag ccgccgccgc 
000961 cgcagcaacc gccccggcgc cagcacccgc cacctccatg ctgaggaggc tggtgcccgg 
001021 tcatggacga acaggcgccc tcaccgtcac cggcatccgc ctcggccgcg ccagccccgt 
001081 ctggcagctc aggcgcaaca agctgcagca gcaaggcgcc gcggccgagc agaagcagag 
001141 cagcgacacc cccaccccca ccaccgccgc caccaagaag aaggccactg ccaccacaac 
001201 cacagcagca acccccacca cccaagacgt cgacggcgag gacaaggccg cggcgagcgc 
001261 gaccacgcca gcggcggcgg cggcaaccgc cggttgccgg aacaacgcgt cgtgctcgga 
001321 agccggcggc gaggaaagca acccgccgca ggggctgttc ggcctccgga ccttcttctc 
001381 caagaaggtg tactgattgc gattcgtcca cgtttatttt tgtacatagc attcgagcta 
001441 tagcttactc catagctgct ggctcattca attcacatct cctcctcctc ccctttcact 
001501 tcgattcagc aagagtagct tttagctttt ctttcttctt ctccattgta cttctactaa 
001561 tctactgctc cttctact

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
BY849738 bast12c07 302
more... (Total Hit Count: 4 )
/rice/oryzabase