cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK243287     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os12g0630500 ( IRGSP 1.0 )
RAP - Chromosome No. 12
RAP - Location, Length 27,128,429 -  27,129,390  ( - );   962(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 27,128,429 -  27,129,390 ( - );   962 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 MSU ID cDNA
Accession No		 RNA Nucleotide
Accession No		 RNA
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os12g0630500 Os12t0630500-01 J100052G13 302648 J100052G13 LOC_Os12g43490.1 AK243287 AK243287.1 116012652 BAH01522.1 215769293 NC_008405.2 297613623 NM_001073869.2 297613572 NP_001067337.1 115489700


Chromosome: 12 ,  position: 27,128,429 - 27,129,390 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 ctgtactaca gcatcaatca aattcaagct agtcacaaca ataatggagc cctccatctc 
000061 gcgtcgacga cgtatcgaca tcgctctcgt gtcgctgctg ctgctcgccg ccgccgccgc 
000121 cgccgtcgac gcggcgacca tcaccatggt gaaccgctgc tcgtacacgg tgtggccggg 
000181 cgcgctcccg ggcggcggcg cccggctcga cccggggcag tcgtggtcga tcagcgtcgc 
000241 cgccggcaca ccggccgcca ggatctggcc gcgcaccggc tgctccttcg acggcgccgg 
000301 ccgcggccgc tgcgccacgg gcgactgcgc cggcgcgctg tcctgcgccg tctccggcga 
000361 gccgcccacc acgctggccg agtacacgct cggccgcccc ggcgccggcg gcgacgactt 
000421 cctcgacctg tcgctcatcg acgggttcaa cgtgccggtg agcttccagc cggcgaacgg 
000481 cggtggcgcc cggtgcagca aggggcgcgg gccgagctgc gccgtggaca tcacggcgag 
000541 gtgcctcccc gagctccgtg tccccggcgg ctgcgccagc gcgtgcggca agttcggcgg 
000601 cgacacctac tgctgccggg gacggttcga gcacgtgtgc ccgccgacga gctactccat 
000661 gttcttcaag gggctctgcc ccgacgccta cagctacgcc aaggacgacc agaccagcac 
000721 cttcacctgc cccgctggca ccaactaccg cgtcgacttc tgcccgccga cgagcggcgt 
000781 gacggccggt gacgaggacg acgagatcgc ctctgcttaa ttaattaatt aagcttatcg 
000841 gcttaattaa tttcgtgtgc cttgatcgat cactactagt acaataattg acatggcaac 
000901 gcatgcactc gatgatctct cttcgataat ttggatgaat aaaattccat cgaattccct 
000961 tt

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
BJ448141 baak18l13 561
more... (Total Hit Count: 42 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ637730 whec10i14 490
more... (Total Hit Count: 12 )
/rice/oryzabase