cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK107649     Link to RAP-DB ( IRGSP 1.0 / Build5 )
RAP ID Os12g0617400 ( IRGSP 1.0 / Build5 )
RAP - Chromosome No. 12
RAP - Location, Length 26,417,621 -  26,419,095  ( + ) ;   1,475(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 26,417,621 -  26,419,095 ( + ) ;   1,475 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No
KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
Tigr ID cDNA
Accession No
RiceXPro
FeatureNum
Os12g0617400 Os12t0617400-01 002131F10 110501 002131F10 17177 LOC_Os12g42280.1 AK107649 1149


Chromosome: 12 ,  position: 26,417,621 - 26,419,095 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 ttctacttcg acgccgatgg caccaagtca cccgacgtcg agatcgagct tgagcagccg 
000061 acgatgatcc acgacttcgc catcaccgag aacttcgtgg tggtacccga ccaccaggtg 
000121 gtgttcaagc tcggcgagat gttccgcggc ggctcgccgg tggtgctcga cagggagaag 
000181 acgtcgcggt tcggcgtgct ccccaagcac gcgacgagct cgttggagat ggtgtgggtc 
000241 gacgtccccg actgcttctg cttccacctg tggaatgcgt gggaggaggc cgagtccggc 
000301 gaggtggtgg tggtgggatc ctgcatgacg cccgccgact ccatcttcaa cgagtcggac 
000361 gaacacctcg agagcgtgct caccgagatc cgcctcaaca cgcgcaccgg cgagtccacc 
000421 cgccgcgccg tgctgccgcc ggcggcgcag gtgaacctcg aggtcggcat ggtgaaccgc 
000481 gccatgctcg gccggaagac gaggtacgcc tacctcgccg tcgccgagcc gtggcccaag 
000541 gtgtccggct tcgccaaggt ggacctcgcc accggcgagc tcaccaagtt cgagtacggc 
000601 gagggccggt tcggcggcga gccgtgcttc gtgcccatgg gcggcgccgg cgccgccgcg 
000661 tccccggcgc gcggcgagga cgacggctac atcctctcct tcgtccgcga cgaggccgcg 
000721 ggcacatccg agctcctcgt cgtgaacgcc gccgacatga ggctggaggc caccgtccag 
000781 ctgccgtcgc gcgtccccta cggcttccac ggcaccttca tcaacgccgg cgagctcgcc 
000841 acgcaggcct aggcaccggc catccatgga ttcttgattc cttggttcat tccaaaacac 
000901 cttccaatct tcttggagag gagaagaaga tgaaaagaaa atttggaggg aaaaggcttt 
000961 accagagggc gccataggca tacataggag gtccccggag cctgacccca actcatacac 
001021 aaacacatca tcatcatcat caaccttaat ctcttggttc ttttcttgat tttaatcact 
001081 gcattaatca cactagtaag tatagcacat tagtagtagt agtagagtga ttagggagag 
001141 actgaggggt ggggcccagc ttgaagcttt tgctttgctt gtacagacag ccaaggagag 
001201 ctcagctggt ttctgctttg tccctcagtg atagggatag ttgcagtgtt gtgtatacac 
001261 agctgctctg cttctgttct gtttctgctc tgtaaaactc tcttgttatt tactgaaggt 
001321 aaaaccaccc agttttctgc aaactgtggt gatgtttggt cactaatcat gtatgcctca 
001381 atctccaatt tccttcactg tgtatatata tattatatac tcttcattca tcactgtatg 
001441 ataatgataa taataatgat gatgatgatt ggtcc

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Wheat ESTs
Acc. No. Clone Name Length
BJ272838 rwhoh13o02 534
more... (Total Hit Count: 2 )
/rice/oryzabase