cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK100537     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os12g0641100 ( IRGSP 1.0 )
RAP - Chromosome No. 12
RAP - Location, Length 27,652,748 -  27,655,312  ( - );   2,565(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 27,652,748 -  27,655,312 ( - );   2,565 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
MSU ID cDNA
Accession No
RiceXPro
FeatureNum
Os12g0641100 Os12t0641100-01 211378 J023101O07 13859 LOC_Os12g44360.1 AK100537 34611
Os12g0641100 Os12t0641100-01 211378 J023101O07 13859 LOC_Os12g44360.2 AK100537 34611
Os12g0641100 Os12t0641100-01 211378 J023101O07 13859 LOC_Os12g44360.3 AK100537 34611
Os12g0641100 Os12t0641100-01 211378 J023101O07 13859 LOC_Os12g44360.4 AK100537 34611


Chromosome: 12 ,  position: 27,652,748 - 27,655,312 bp

   Now loading


#
#
Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 tttatggaga cctggaaaca taagttacta tagattttat ggccatatta atattgtttt 
000061 tccctttatt tcttgatgga agttaaaatc aggaatcatg tatttagtta actattataa 
000121 catgacccga ctttctttat ctgcagttgt aaggcactct tgactaatgc tgtatctgtc 
000181 attgtataca tcagctacat ggcaggataa tgtggtgctt aaaaagagca ctaaaacgta 
000241 atatgattat gtgatattgc ctgctgctca cccttaatta ctgcatatta tacaggactg 
000301 ctattgttgt gtatcagtta ttctatagga tggtgcttgg aagaactttc gatgcaggat 
000361 caataataaa attcttgtca gaagtttcac ttggagcgta tgtggaatat tctttgaatc 
000421 tcaagactgg ataatgatgt tatagtgctt ttaagtacta attctttttg tatattcctt 
000481 taccagtgtt gctctgggcc ttgcttttgg aattgcatca gtactgtggc tgggctttat 
000541 ttttaatgat acaatcatag agatcgcgct tactcttgct gtcagctaca ttgctttctt 
000601 cactgtaaga taaataatac atccaacctt ctccacctgt tcttttcttc agaagggcat 
000661 ttctggttaa gttacttgag ctacgttgca gcaaacagaa taagttgtgg ttcatcctat 
000721 aattacaatt catgatggcc tttttttttg ttttgcaatt ttgctagaga tgtcatttta 
000781 ctgctaagca gtggtagttg ctacatgcac atatagcttg aatatctatg atatatttaa 
000841 agatgcataa tcggtcaggg attcatggtt tcttgaaatg tgcatatgca attacagagc 
000901 gtcaaatgat ttgttcaaat attattatta ttgagggtta ctactgatgg catctctgat 
000961 ttatagttct aataatttgg gctatgatgg gtgaaacttt ggataggtga atggatctgt 
001021 gaagaaatta tttgaacata ggttgtaaaa tgagcatatg ctaagaaatg taagggtaca 
001081 tgtctgtaca ttataatgtg cctataaatg gatcagtcat catttttact agcccaatca 
001141 tttgtcttct tcccatattt ttgcaactac tgactgcatg tatatttttc tgtgagcatt 
001201 tgcacatata acattaacat atcagtaccc ctgattattg ttagcttgtt tgatcacctg 
001261 tgcaagtatc catcatggac tggtttttct gataccttct gcaataggaa ttcgtctgtg 
001321 ttttggataa aattatgcca attaataata agtgtttatt tccctctatt ttcttggagt 
001381 cttctcattt actaatgtgg ttatatcagg cacaagatgc actggaggtc tctggtgttt 
001441 tgaccgtcat gacactggga atgttagtaa aacatttgtt ggcgacctat tctgtgtatc 
001501 ccttaaatac catcaaatat tgacacgtca tatgtccagg ttctatgccg cttttgcaaa 
001561 aactgctttt aagggtgaca gtcagcaaag cttgcatcat ttctggtatg tcaatcaata 
001621 tgtgtcactt taacaaatat taaattatca agtcatgatc aatcttaaca ttccatcagt 
001681 tctgtaaagc tgtttgatgt tcatgcttcc tacatttaca ttaaattctt gtgctcttgt 
001741 agagctacta tgctgcattg ttgattttgt tggattcagt agccagtcat ttcacttgca 
001801 tgccattatt gtttttctca gtggtggatc tataaatgtt ttagagcctg ggcaagtaaa 
001861 aatagatgat gataaaataa cataaaataa aattcattca actctatata ccatttacac 
001921 aagcaagagt gcaagttctg aattaggaga ggaaaaccag tagaagggat tatcaatgaa 
001981 tgattgtata cttgtacatt gttgatagac tagacatata tacagagtag tgacatgtgc 
002041 tacccataat tcctttatag ctgttctgtt tccttttgct agttgtgtat tttggttggc 
002101 taatctagga ggctaatgag taactaaata caaaatttaa cgctgcatgc ggtggcggag 
002161 cccggcaact gctcagggtt gctgggcctt ggctccgctg ctgttttttc tggttgcacc 
002221 aaaacaatgt tagtaagaaa tctgcagcaa aatgagatgt aaatccaatt tataagtgga 
002281 agaccaacaa gaaagcagat tagaaaatcc ctcgagtggc atgcaactta attcactgct 
002341 ctaagaccaa attacacccc attatgcagt ccattactca tttggccata agatacaacc 
002401 caggatatgt cctagtggct aatggatatg ttgcggtcct gaacttttct tttcttttcc 
002461 ttttgtttcc tcttttttag ccctgtgctg aacttctatg aaactcctgt aaaaatcgtc 
002521 tgcgttttca ttaattaaag cgggggagat gctctccctt tctcc

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs  
Acc. No. Clone Name Length
BY869881 rbart61e12 125 view details
/rice/oryzabase