cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK099201
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os12g0178100
(
IRGSP 1.0
)
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RAP - Chromosome No.
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12
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RAP - Location, Length
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3,954,989 -
3,958,802
( - );
3,814(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
3,954,989 -
3,955,307
( - );
319 (bp)
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Exon 2
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Location |
3,955,389 -
3,955,493
( - );
105 (bp)
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Exon 3
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Location |
3,955,590 -
3,955,667
( - );
78 (bp)
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Exon 4
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Location |
3,955,754 -
3,955,828
( - );
75 (bp)
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Exon 5
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Location |
3,956,329 -
3,956,415
( - );
87 (bp)
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Exon 6
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Location |
3,956,497 -
3,956,564
( - );
68 (bp)
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Exon 7
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Location |
3,957,594 -
3,957,681
( - );
88 (bp)
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Exon 8
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Location |
3,957,784 -
3,957,884
( - );
101 (bp)
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Exon 9
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Location |
3,957,957 -
3,958,077
( - );
121 (bp)
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Exon 10
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Location |
3,958,424 -
3,958,546
( - );
123 (bp)
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Exon 11
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Location |
3,958,677 -
3,958,802
( - );
126 (bp)
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Chromosome: 12
, position: 3,954,989
- 3,958,802
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 agcgaaccac tcccaaaacg ccaccaaaac cctcctctcc ccacctccgc cgccgccgac
000061 atggccgtcg tccaccgcct cctccgccgc ggcctctccg ccgcctctcc cctcccctct
000121 cttcaggtac tagtaccacc tacgacgcct ccccccctcc ctttcgctgt tcattacccg
000181 cgccggcggc ggaccggttc ttgatttagc gatgtccctt tcttgatgat ttttgttcat
000241 tttctccccc gtgaaggagc tcgggaggcg tccggcgagc tcgtcggcgg cggcggcggg
000301 ggacgcggcg gctgagctgc ggggcgcgcg ggaggacgtc aagcagctgc tcaagtccac
000361 ctcctgccat cccatcctgg tatgctaata tatgctttgc tgctttagtg ttcttgtgca
000421 aagattgcgg gtttgtatgg ttcgaagagt ataatgggat tttagattgt ctagctatat
000481 ccatggattt cgcatctcta caaaagattg ttctttgtgt gtttagttaa ctggtcgatt
000541 atgctattta aaacagtaac ttttacttcg agaagatgca actgctctag ttcacctgtg
000601 tgcaagaaga ctgtaacacg ttctatgcac aatattcgct agatttgtgc agttcatggt
000661 tctgcatctg cttgatcgaa cattgcatat ttatgacttg tctgctgggt taaccttggt
000721 tgcaggttcg gttagggtgg catgatgctg gtacttatga caagaacatt actgaatggc
000781 caaagtgtgg tggtgccaat ggtagcttga gattcgaaat tgagttaaaa catgcggcta
000841 atgcaggtag tgcttctgtt ctgtcattat ctattgttcg tgattcatgg ttatccttac
000901 aataaccctc tacttcaggt cttgtgaatg ctttgaagct gatccagccc atcaaagaca
000961 agcatgcagg tgtcacttat gcagatctgt ttcagctcgc cagtgctaca gccattgagg
001021 tccttttgtc actttagtct aatgataact atgaactatc attcaaacag tatttattat
001081 ttaatgctga tatgattgct ttggtctgtt ttaaaactca ggaagccggt ggccccaaga
001141 tccccatgat ctatggaagg gttgatgttg ctgcccctga acaatgcccg ccagagggga
001201 gacttcctgg tcagtagctt ttgggttctg tagcccaaat ttgttcgtta ccgtgattta
001261 tcatctggaa actaaaatat aatgctgtac ctttagtgtc atgtcacact gatcccaagt
001321 tgctattaca attggccatc ttcttgcagc ttcatttcgc aaattctact ttctccttat
001381 tcattaaacc tagaatattg ataactttca gagcagaact gatatgtgtt ccaacactca
001441 gaaatgaagt tacaaatata ctctattggt cctcttgttt aatctcaatt tatgggttat
001501 catgcaattg agatacctga ttgacatagg aaatcgcgca tatccatctt tatttgtctg
001561 caatctattt acatcaaaat caaattattt agatgtagtg tcaacaatag aagacattaa
001621 tataaattga tagttttctt gctaacctac tgtaatagtc ctgttttatt tcttctttaa
001681 tgataaattt attttcttaa atggacaatg gtctgcctat aataggctat tacattcgtg
001741 gtaatgcctc tcagattcaa cttatttaga aggtttaggc gtggtatctt atccatgtat
001801 ctatgggttt tacttcatga agtactaaaa ttgatgctaa ctggctaaaa gcatgaaaaa
001861 acaagtttct tatgaaatat tgccaccgtg agctctgtaa tctggtgtaa taacattttg
001921 gacatgcaaa tgtgtaagaa agattacccc aattgcaata taacagaaaa attgtaagct
001981 gcacatgctg tgcagaatga aaatcagtgc tatgattgca cttaacctgt gagattgata
002041 aaatatagct ccccaagaat tgcagcactt tcagctgttt gtttttgtat tcacatgaca
002101 ttgatatatt tcctgctgtg tcttatagtg tactttgata tttgaaatct agtgctgatg
002161 atgatctaat cctctttcat atgcatgtgc tttctgttgc aattttgttc cctatatttt
002221 acatttccac cctttcagct gctggccctc cttcacctgc ggaacatcta cgagaagtat
002281 tctatagaat gggcctgagt gacaaggtac ttgcagattg cttcattcaa tattccaaac
002341 aactttttct ggggatttgc tagttacatc tgttttgtga tctgtaggaa attgttgcat
002401 tgtcaggagc tcatacactt ggacgatcta gaccagagcg cagtggatgg ggcaaaccag
002461 aaactaaata cactgtatgt aacttatata gttatatcag tagtaggtta ttgttctgat
002521 tttagtaacg ccttgtccat gattcatttt ggagtattgc atgttattta gttactacgt
002581 attttttaga ttagccaatg ggataattaa gttgtcatca ctggcaatgc ttattgatct
002641 tgcatatatc tcttccttgt aaaagctctg tattgaagat ctttatatga tttattacta
002701 cttcaccgaa gaaaataaag agatgcttct gcgctgttgt gttagttgac catattatgc
002761 ttcatctcta atcgcggatg acctatatta gcatcaatgc tacaaacttt cctactacag
002821 tgcttatatg ctttcaaata tgttcttgtg ggtagtagac ttgcagtatt aactatatct
002881 agcatgcact ccttcatgaa gttcttgctg atgaatgttc tgaatgttga atttcttgtt
002941 tggctaattg attaatttct tttgactcgc aaagaaaaac ggacctggtg cacctggagg
003001 gcaatcttgg acatcacagt ggctgaagtt tgataatagc tacttcaagg taggatgcac
003061 tattttcttt atcaatacca aacatgatag cagttacaat ttacaaaact tatgttagtc
003121 tgcataaaat ttaaggacat caaagaacgc cgagatgagg accttctagt tctgcctact
003181 gatgctgtgc tctttgagga ctcatcattc aaggttagtg aagattctca tcagctcttg
003241 ttgtaaagaa ctgcaaatca aaagtgacgc tctaaactaa aaagttttgc ttgcttgcca
003301 tgcctgaaga tctatgctga aaagtacgcc gcagatcagg atgcattttt tgaagactat
003361 gctgaagctc atgccaaact gagcaatctc ggagcaaagt ttgatcctcc aaaggtaagt
003421 gagattaaag actaacatta ctggaattaa aaaatgtgca gtcaacttga catggttatc
003481 actgaaatga cacagggtat ttcactggaa taagtggcgt ctgctgccga tgagctgcat
003541 tttggcgaat gaacaagacg ataccctgtt tcttcttgct actatagagc atattatggt
003601 tttattaccg atccagaaat ttaatccatt gatcggcaaa tgtgatgttg gtgttttgta
003661 ttgagttgtg ctctccatta gaaataaaaa tagcggtggc cattttcgtt tccaggacca
003721 aacattttgg cacattacaa tacaatgttt tagatgatgt ctgcattgag ctcttacaca
003781 ggatgatcaa aatatatgac ataatttatt actg
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
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