cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK061611     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os12g0274700 ( IRGSP 1.0 )
RAP - Chromosome No. 12
RAP - Location, Length 10088023 -  10088955  ( - );   933(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 10088023 -  10088646 ( - );   624 (bp)
Exon 2 Location 10088750 -  10088955 ( - );   206 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXpro
FeatureNum		 RNA Nucleotide
Accession No		 RNA
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI		 UniProt
Accession No		 UniProt Entry
Name
Os12g0274700 Os12t0274700-01 104280 001032F07 3814 LOC_Os12g17600.1 AK061611 10551 AK061611.1 32971629 BAG88038.1 215692618 NC_008405.2 297613623 NM_001073091.1 115488143 NP_001066559.1 115488144 Q0INY7 RBS1_ORYSJ
Os12g0274700 Os12t0274700-01 104280 001032F07 3814 LOC_Os12g17600.2 AK061611 10551 AK061611.1 32971629 BAG88038.1 215692618 NC_008405.2 297613623 NM_001073091.1 115488143 NP_001066559.1 115488144 Q0INY7 RBS1_ORYSJ


Chromosome: 12 ,  position: 10,088,023 - 10,088,955 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 agcagtgcat ctcaagaagt actcgagcaa agaaggagag agcttggtga gctgcagaga 
000061 tggccccctc cgtgatggcg tcgtcggcca ccaccgtcgc tcccttccag gggctcaagt 
000121 ccaccgccgg catgcccgtc gcccgccgct ccggcaactc cagcttcggc aacgtcagca 
000181 atggcggcag gatcaggtgc atgcaggtaa taacctactg acccaacaca cattattctt 
000241 cttcttcttc ttcttcttct tcttcttctt cttcaacatt aaccaataat tcaattatcg 
000301 tttatttagg tgtggccgat tgagggcatc aagaagttcg agaccctctc ctacctgcca 
000361 ccgctcaccg tggaggacct cctgaagcag atcgagtacc tgctccgttc caagtgggtg 
000421 ccctgcctcg agttcagcaa ggtcggattc gtctaccgtg agaaccacag atcccccgga 
000481 tactacgatg gcaggtactg gaccatgtgg aagctgccca tgttcgggtg cactgacgcc 
000541 acccaggtgc tcaaggagct cgaggaggcc aagaaggcgt accctgatgc attcgtccgt 
000601 atcatcggct tcgacaacgt caggcaggtg cagctcatca gcttcatcgc ctacaagccc 
000661 ccgggctgcg aggagtctgg tggcaactaa gccgtcatcg tcatatatag ccttgtttaa 
000721 ttgttcatct ctgattcgat gatgtctccc accttgtttc gtgtgttccc agtttgttca 
000781 tcgtcttttg attttaccgg ccgtgctctg cttttgtttt tgtttcacct gatctctctc 
000841 tgacttgatg taagagtggt atctgctacg actatatgtt gttgggtgag gcatatgtga 
000901 atgaaatata tggaagctcc ggctatatat att

相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。

Hit Barley ESTs
Acc. No. Clone Name Length
AK249351 FLbaf28b03 884
more... (Total Hit Count: 4416 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ714322 whva2e08 557
more... (Total Hit Count: 14470 )
/rice/oryzabase