cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK061107
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os12g0178100
(
IRGSP 1.0
)
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RAP - Chromosome No.
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12
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RAP - Location, Length
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3,954,989 -
3,958,813
( - );
3,825(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
3,954,989 -
3,955,307
( - );
319 (bp)
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Exon 2
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Location |
3,955,389 -
3,955,493
( - );
105 (bp)
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Exon 3
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Location |
3,955,590 -
3,955,667
( - );
78 (bp)
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Exon 4
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Location |
3,955,754 -
3,955,828
( - );
75 (bp)
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Exon 5
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Location |
3,956,329 -
3,956,415
( - );
87 (bp)
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Exon 6
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Location |
3,956,497 -
3,956,564
( - );
68 (bp)
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Exon 7
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Location |
3,957,594 -
3,957,681
( - );
88 (bp)
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Exon 8
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Location |
3,957,784 -
3,957,884
( - );
101 (bp)
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Exon 9
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Location |
3,957,957 -
3,958,077
( - );
121 (bp)
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Exon 10
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Location |
3,958,424 -
3,958,546
( - );
123 (bp)
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Exon 11
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Location |
3,958,677 -
3,958,813
( - );
137 (bp)
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Chromosome: 12
, position: 3,954,989
- 3,958,813
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 gaccacggag cagcgaacca ctcccaaaac gccaccaaaa ccctcctctc cccacctccg
000061 ccgccgccga catggccgtc gtccaccgcc tcctccgccg cggcctctcc gccgcctctc
000121 ccctcccctc tcttcaggta ctagtaccac ctacgacgcc tccccccctc cctttcgctg
000181 ttcattaccc gcgccggcgg cggaccggtt cttgatttag cgatgtccct ttcttgatga
000241 tttttgttca ttttctcccc cgtgaaggag ctcgggaggc gtccggcgag ctcgtcggcg
000301 gcggcggcgg gggacgcggc ggctgagctg cggggcgcgc gggaggacgt caagcagctg
000361 ctcaagtcca cctcctgcca tcccatcctg gtatgctaat atatgctttg ctgctttagt
000421 gttcttgtgc aaagattgcg ggtttgtatg gttcgaagag tataatggga ttttagattg
000481 tctagctata tccatggatt tcgcatctct acaaaagatt gttctttgtg tgtttagtta
000541 actggtcgat tatgctattt aaaacagtaa cttttacttc gagaagatgc aactgctcta
000601 gttcacctgt gtgcaagaag actgtaacac gttctatgca caatattcgc tagatttgtg
000661 cagttcatgg ttctgcatct gcttgatcga acattgcata tttatgactt gtctgctggg
000721 ttaaccttgg ttgcaggttc ggttagggtg gcatgatgct ggtacttatg acaagaacat
000781 tactgaatgg ccaaagtgtg gtggtgccaa tggtagcttg agattcgaaa ttgagttaaa
000841 acatgcggct aatgcaggta gtgcttctgt tctgtcatta tctattgttc gtgattcatg
000901 gttatcctta caataaccct ctacttcagg tcttgtgaat gctttgaagc tgatccagcc
000961 catcaaagac aagcatgcag gtgtcactta tgcagatctg tttcagctcg ccagtgctac
001021 agccattgag gtccttttgt cactttagtc taatgataac tatgaactat cattcaaaca
001081 gtatttatta tttaatgctg atatgattgc tttggtctgt tttaaaactc aggaagccgg
001141 tggccccaag atccccatga tctatggaag ggttgatgtt gctgcccctg aacaatgccc
001201 gccagagggg agacttcctg gtcagtagct tttgggttct gtagcccaaa tttgttcgtt
001261 accgtgattt atcatctgga aactaaaata taatgctgta cctttagtgt catgtcacac
001321 tgatcccaag ttgctattac aattggccat cttcttgcag cttcatttcg caaattctac
001381 tttctcctta ttcattaaac ctagaatatt gataactttc agagcagaac tgatatgtgt
001441 tccaacactc agaaatgaag ttacaaatat actctattgg tcctcttgtt taatctcaat
001501 ttatgggtta tcatgcaatt gagatacctg attgacatag gaaatcgcgc atatccatct
001561 ttatttgtct gcaatctatt tacatcaaaa tcaaattatt tagatgtagt gtcaacaata
001621 gaagacatta atataaattg atagttttct tgctaaccta ctgtaatagt cctgttttat
001681 ttcttcttta atgataaatt tattttctta aatggacaat ggtctgccta taataggcta
001741 ttacattcgt ggtaatgcct ctcagattca acttatttag aaggtttagg cgtggtatct
001801 tatccatgta tctatgggtt ttacttcatg aagtactaaa attgatgcta actggctaaa
001861 agcatgaaaa aacaagtttc ttatgaaata ttgccaccgt gagctctgta atctggtgta
001921 ataacatttt ggacatgcaa atgtgtaaga aagattaccc caattgcaat ataacagaaa
001981 aattgtaagc tgcacatgct gtgcagaatg aaaatcagtg ctatgattgc acttaacctg
002041 tgagattgat aaaatatagc tccccaagaa ttgcagcact ttcagctgtt tgtttttgta
002101 ttcacatgac attgatatat ttcctgctgt gtcttatagt gtactttgat atttgaaatc
002161 tagtgctgat gatgatctaa tcctctttca tatgcatgtg ctttctgttg caattttgtt
002221 ccctatattt tacatttcca ccctttcagc tgctggccct ccttcacctg cggaacatct
002281 acgagaagta ttctatagaa tgggcctgag tgacaaggta cttgcagatt gcttcattca
002341 atattccaaa caactttttc tggggatttg ctagttacat ctgttttgtg atctgtagga
002401 aattgttgca ttgtcaggag ctcatacact tggacgatct agaccagagc gcagtggatg
002461 gggcaaacca gaaactaaat acactgtatg taacttatat agttatatca gtagtaggtt
002521 attgttctga ttttagtaac gccttgtcca tgattcattt tggagtattg catgttattt
002581 agttactacg tattttttag attagccaat gggataatta agttgtcatc actggcaatg
002641 cttattgatc ttgcatatat ctcttccttg taaaagctct gtattgaaga tctttatatg
002701 atttattact acttcaccga agaaaataaa gagatgcttc tgcgctgttg tgttagttga
002761 ccatattatg cttcatctct aatcgcggat gacctatatt agcatcaatg ctacaaactt
002821 tcctactaca gtgcttatat gctttcaaat atgttcttgt gggtagtaga cttgcagtat
002881 taactatatc tagcatgcac tccttcatga agttcttgct gatgaatgtt ctgaatgttg
002941 aatttcttgt ttggctaatt gattaatttc ttttgactcg caaagaaaaa cggacctggt
003001 gcacctggag ggcaatcttg gacatcacag tggctgaagt ttgataatag ctacttcaag
003061 gtaggatgca ctattttctt tatcaatacc aaacatgata gcagttacaa tttacaaaac
003121 ttatgttagt ctgcataaaa tttaaggaca tcaaagaacg ccgagatgag gaccttctag
003181 ttctgcctac tgatgctgtg ctctttgagg actcatcatt caaggttagt gaagattctc
003241 atcagctctt gttgtaaaga actgcaaatc aaaagtgacg ctctaaacta aaaagttttg
003301 cttgcttgcc atgcctgaag atctatgctg aaaagtacgc cgcagatcag gatgcatttt
003361 ttgaagacta tgctgaagct catgccaaac tgagcaatct cggagcaaag tttgatcctc
003421 caaaggtaag tgagattaaa gactaacatt actggaatta aaaaatgtgc agtcaacttg
003481 acatggttat cactgaaatg acacagggta tttcactgga ataagtggcg tctgctgccg
003541 atgagctgca ttttggcgaa tgaacaagac gataccctgt ttcttcttgc tactatagag
003601 catattatgg ttttattacc gatccagaaa tttaatccat tgatcggcaa atgtgatgtt
003661 ggtgttttgt attgagttgt gctctccatt agaaataaaa atagcggtgg ccattttcgt
003721 ttccaggacc aaacattttg gcacattaca atacaatgtt ttagatgatg tctgcattga
003781 gctcttacac aggatgatca aaatatatga cataatttat tactg
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
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