cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK121952     Link to RAP-DB ( IRGSP 1.0 / Build5 )
RAP ID Os11g0454300 ( IRGSP 1.0 / Build5 )
RAP - Chromosome No. 11
RAP - Location, Length 17,488,598 -  17,489,392  ( - );   795(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 17,488,598 -  17,488,947 ( - );   350 (bp)
Exon 2 Location 17,489,035 -  17,489,392 ( - );   358 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No
KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
Tigr ID cDNA
Accession No
RiceXPro
FeatureNum
Genomic Nucleotide
Accession No
Genomic
Nucleotide GI
Genomic Protein
Accession No
Genomic
Protein GI
RefSeq Genomic
Nucleotide
Accession No
RefSeq Genomic
Nucleotide GI
RefSeq RNA
Nucleotide
Accession No
RefSeq RNA
Nucleotide GI
RefSeq Genomic Protein
Accession No
RefSeq Genomic
Protein GI
UniProt
Accession No
UniProt Entry
Name
Os11g0454300 Os11t0454300-01 J033107K14 216671 J033107K14 21349 LOC_Os11g26790.1 AK121952 15380 AP008217.2 255679674 BAF28207.1 113645066 NC_008404.2 297612483 NM_001074376.1 115485400 NP_001067844.1 115485401 Q2R4Z4 DHR21_ORYSJ


Chromosome: 11 ,  position: 17,488,598 - 17,489,392 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 gcacaccaca gcaagagcta agtgagctag ccactgatca gaagaacacc tcgatctccg 
000061 agagtttttt ttcagcttta gcttaagcag gatggagcac caggggcagc acggccacgt 
000121 gaccagccgc gtcgacgagt acggcaaccc ggtcggcacc ggcgccggac acggccagat 
000181 gggcaccgcc ggcatgggga cgcacggcac caccggcggc atgggaacgc acggcaccac 
000241 cggcggcatg gggacgcacg gcaccaccgg caccggcggc ggccagttcc agccgatgag 
000301 ggaggagcac aagaccggcg gcgtcctgca acgctccggc agctccagct caagctcggt 
000361 acaaacattt tgcccccaat tctttacccc cccagtaaaa ccttgcgtac aaattcgttg 
000421 aaaaatttta atgtctttgt gacagtctga ggatgatgga atgggaggga ggaggaagaa 
000481 ggggatcaag gagaagatca aggagaagct ccccggcggc aacaagggcg agcagcagca 
000541 tgccatgggc ggcaccggcg gcgcctacgg gcagcagggc cacggcaccg ggatgaccac 
000601 cggcaccacc ggcgcacacg gcaccaccac caccgacacc ggcgagaaga agggcatcat 
000661 ggacaagatc aaggagaagc tgcccggcca gcactgagct cgacacacca ccacaccatg 
000721 tgtctgcgcc gccggcgacg gccgccacgt caccttcctg aataataaga tgagctagcc 
000781 gagcgcaata aaagg

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
BY838371 baet16g06 446
more... (Total Hit Count: 21 )
Hit Wheat ESTs
Acc. No. Clone Name Length
BJ290630 whsl19j06 636
more... (Total Hit Count: 224 )
/rice/oryzabase