cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK105069
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os11g0545600
(
IRGSP 1.0
)
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RAP - Chromosome No.
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11
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RAP - Location, Length
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22,323,807 -
22,332,560
( - );
8,754(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
22,323,807 -
22,324,035
( - );
229 (bp)
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Exon 2
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Location |
22,324,356 -
22,324,440
( - );
85 (bp)
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Exon 3
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Location |
22,325,224 -
22,325,393
( - );
170 (bp)
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Exon 4
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Location |
22,327,453 -
22,327,532
( - );
80 (bp)
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Exon 5
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Location |
22,328,207 -
22,328,311
( - );
105 (bp)
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Exon 6
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Location |
22,329,187 -
22,329,227
( - );
41 (bp)
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Exon 7
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Location |
22,329,319 -
22,329,354
( - );
36 (bp)
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Exon 8
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Location |
22,330,392 -
22,330,537
( - );
146 (bp)
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Exon 9
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Location |
22,331,544 -
22,331,557
( - );
14 (bp)
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Exon 10
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Location |
22,331,681 -
22,331,734
( - );
54 (bp)
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Exon 11
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Location |
22,332,168 -
22,332,362
( - );
195 (bp)
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Exon 12
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Location |
22,332,448 -
22,332,560
( - );
113 (bp)
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Chromosome: 11
, position: 22,323,807
- 22,332,560
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 aagtatctct ctctaaagat tcttggacga ctcgtgctcg tgcgtaaaag aaagaaatct
000061 cccgtctcct cgtcgttcct ggcgagcaga gcaggagagg ggaggagatc ctggtgagca
000121 tccatccaca tcctctttct gattcatctc tcgtcgttcc tggcgttcgt tcgttaaccc
000181 tagcttctct tcttctagat ctggaagaag aaggagctct tctccgaatt tcagaaccct
000241 aaacctcaat acaagcaaca gtttgtttgt tcccccaaag tacccccacc aatgtcccaa
000301 gctggatcgg aatccgccgc tgccaaggag ccgtcgttca aggagggcga gagagtgctc
000361 gcctaccacg gcccgctcct ctacgaggcc aaggtccgct ccttaatccc tctcttctcc
000421 ccccctatct cccgttccat tccgctccaa tccaacctag ggtttcgttt aattttgcga
000481 agaaatggcg ctaggattta cccaattcgg atgcagacca aacaaaacaa tcaaacaaac
000541 aagcattcgc ctccatagct gcgctgctcc gctccgatac tttgaaattt ttactagtat
000601 tactagtatt taccaaggga atttagtaat ttactaatta ctgtgcaaaa tcctccgcac
000661 caggaaatta aattccctct gcttgccgtg cttttctgct agtctagtct aggtcatatc
000721 tgtgcactgt gctattccgt tcatcatttc ctagcctttc ttttgcttgt taattgcatt
000781 ccctaataga ttgtcttcat ttccctcccc ccttggattt ctcaaggttc aaaagtccga
000841 aaacaaggag gatgagtggc ggtatcatgt ccattatctt gtaagtcccc taagtctctg
000901 tcgccattgt acaccatgac aagtgcttaa aaataaatca ttaactttgg gtgttccctt
000961 tcgatatcga ggaaccaacg aatctttctc ttttcttttg tagggttgga ataagaggca
001021 agtgcatacc atggatgatc gataagtctt ccatgcttag ctaataactt attaccaatg
001081 ctttcgagtt ctttatgttg atgtgaatat ttttttaacc gtacaaggaa tatctgtacc
001141 tgtacttata tgatgcattt gatgtttgtt ctatcaagca attgatatta ttattacata
001201 tagtagcatg agatatgtga aagtgaaact atgcaaagct tctcgtgcat ctcactggcc
001261 tcaatctgat taattcagaa ctacatcata gcatcatata aaatccatag aattcagaac
001321 aggctctggc tactctgtgt ctctttgttg tgtaatggaa atatatgatg ttttttaaaa
001381 ccatcgaatc aaacttttat agttttgacc accaatatat caaatgctat ttatagattc
001441 acttgtaaat gaaaccatta gattcgttta tggaacataa ttttaaatat gataattgaa
001501 tgattatgtt gatgaattca tctgtagaac atgatctgtg tctcagttgg ggaagtgatc
001561 ctatacccgt tttgttgact tttgttttag gatacgagtg agtgcctgga gcccggatga
001621 ctgacatata tttaaatatg accaatccat tttctacgtg tgaattgaag tgatggcaac
001681 acaaattttt ttaatagttg tgctggatga aaaatttcac tgaggccctt gacagtttaa
001741 aagtgtctaa gttggatttt ggaccttgag ttggatatga atgaccttat gcatgttcta
001801 atgtattatt ttttttctgg cagtgccata ttgttgtcta ccaccatgtt tgggtagtct
001861 cacatctttg cccttacggt gcaatttttt ttcttaatag tattttcatg aatcctgttg
001921 aggggcttgt ttctatcatt gcactgatgc tatttagttg tctttctgct ctcctaattc
001981 aagtaaacag tcttcttaat atgtttattt tcaatgagta cagctgggat gaatgggtca
002041 caaatgatcg cttactgaaa ttgaccgacg aaaatatccg caaacaacaa gagcttgaaa
002101 agagccaagt agttgacaaa agcgtaaaat ctggacggtc agcgcagcat aagccaaaag
002161 gctctaatgg ttagcttatg cctccctctt ctttccattg gaattgatga cacatgcttt
002221 ttttactggg tcaatagttt ttacttctat ccatgacaag ctagatgtat gttaaatcaa
002281 tgtttgtgct gttggatcat gtctagacta ttccactggg agcttccttt ctaggaacta
002341 ttttgccaaa ttgttgtttt taatttgttc tgtagctgtg agtgtcatgt ttctatgata
002401 aattttgtat tttgctaata gaagcatcat cctggcagtg cttaatctgt acttaaaaga
002461 gtagaaatgc caaatggcaa agagattgtg aatatgtgat ggttataact gaatgctgtg
002521 atcatttaca ttgatggatt aagctcaaac ttcacccttg gagatatttc ttccgaagtt
002581 tggagttatg aaccaatctt ggagtaattt tgtgatagct tctggtacaa gtacgtggta
002641 gcttactgtt atgggcgttg gtactgtgca tataggacat tctgaaattt cccattcatc
002701 ttttttcata tcggtgtggt tatgaactca tgatcatatt tctgtttttt atggtggaaa
002761 ctatctctca gtccaatcat gaaaactgcc atggctttga caccaattca gcatgaaaac
002821 tctcagaacg ttgtatatgt tcttttcagt tgttaaacta tctgtttatt gaatttgaac
002881 tgcaatttta tttgtacttc tagaaataag aaatgatgac aaatggtaaa ccaaagggaa
002941 agaaaacata gaagttccta tttgcaatag aagttcctat ttgcaacaaa tatttttgtt
003001 tctgacacat tcaatttgaa gttgaattct taatggggtg ctaccactct atttgctaca
003061 ttgagaatgg aatttcccat gctgttatag tggttatacc aaaatttttc ccatgcttcc
003121 accaaaggat gggtttccat tttatgtctt actttgtaat ttgttcctct taaatatgtc
003181 ttacctattg taattgcatt cagcagatgc aaaaactgat aaagaagaca ccaagattat
003241 tagtaagttc actcgtacat ttttcaaagt tcttggttct tctcatttgt gtgatactta
003301 ttacatttga tctctgtgat gttaaaactg cagtcaaggg gaagaaacgc aaaagtcagc
003361 ctggtgggac tgaggtgtct ctcactttca aatatgtttt attgtgaagt atttgatttc
003421 catgaagttc attttccatc aattatgata ctgcaatttg ccttttgaga tatcatttct
003481 aaactactga tattaagcat atttctgctc ctttgaacta ataatacttt tttattaatt
003541 ctctttttat ttctagtact actccctccg tttcacaatg taagtcattc tagcatttct
003601 cacattcata ttgatgtcaa tgaatctaga catatatatc tgtctagatt cattaacatc
003661 aatatgaata taggaaatgc taaaatgact tacattgtga aacggaggaa gtacatgatt
003721 tggcagttat gttcattttt catcatacat gtggaaaatg ggaacattct atggtccata
003781 tggacctttc ttctcttttt acaatataag tataacactt aaagttcttg accttttgtt
003841 gtatgatgat gactatttca ttttctcaac atttctaaaa ttgtaatgat gaattttagg
003901 aaatcttgct gcttcggtgc ttcgtttagt tctttacaca acaatccgat ttctggacta
003961 catgatgttt gcttaccagc aaaaataatc tagctgtgta agaattgtta gtatggataa
004021 atttagaaca catgttaaat ttaaattggt agtttggaac tatgaactaa tgttttacat
004081 tgtgcgaaga gaattcgtta cctacctatt atggttatgg agactgacaa acttaacatt
004141 ttgaagcttt cagctatatt tggcaagcat gtggtagatc attttatcta tcaagttgtt
004201 ttgtggtata tttgtaaaca taatgacaac tctgccctgg ttgatccagg agaaagaaag
004261 aaaatcatct gagagtctct tcatgtcaca ttttccttca acgctaaaaa agcaacttgt
004321 tgatgattgg gagtttgtca cgcagctggg taaggtattc aaatctttcc ctgagctgtc
004381 tttgatttat ttatgtccaa atcacaacct tcattgttca attataattg aatattgtgt
004441 ctgagttggc atgggaacaa caggtactta agagaagcat gtttgtatca aataggaacc
004501 aataagagaa tgaatacttg aaatctttat ttcgttcaga aaaaaagact agcaatcttg
004561 accagtggat atattgttca ttgtacattc cgcagctaaa ttttgacata taccacctta
004621 ctgttagata agcaaccttg atatatacca ctcaaactta cctagatcat tagttatatt
004681 gtgtatcttt tgtatatttc gtgtatctgt ggagctggac tttctgcatc tttttgaaca
004741 tgattgactg atgccaatat gttgtcatgt tcatttctca tgttaaggaa acttataaga
004801 attaagtttc cccaaaaagg ttactatttc aagaagtaag aattactaac aactagatag
004861 acttgagtgt ttcaagtcat tatgttgcac taatccctga tgtgaaaagg tacttgttag
004921 aaaactacga atacgatgag tttgtcctca gtgatgtatg ccaaagttaa ctgtaactgt
004981 ttatcattct accagttcct ttcctgagcc aatttccttg tactgcagct tgtgaagcta
005041 cctcggtccc ccacggtcga tgatattcta aagaagtact tggagcaccg gacaaagaag
005101 gataacaagt aagcattcta tataaacata aattctgatt tattggcata tctttgacac
005161 agcaagttat aaacagtacg ggattcggaa ttctactgta ggtattgagg catacaccat
005221 gatgttttaa acaaatgtta gtgtcattag tgcaattcct tatttgctac tcggaaatcc
005281 atgtgatccc tttaccccta atgtcttgct gacatgtgga ccctggacca acatgtcatt
005341 gagagaatga gccgcaaata agggaacgag taaactttca gaggtgcaga aaagttataa
005401 ttctcttaat ttgaagaagg gataaaataa agtgcggaaa gatattatag cctaacatgt
005461 ttttgaatta gaattgatgt atttttcaga aaatattgga agttactcta attttaacaa
005521 ataaacagaa aaaaaaagga ggatgttggt gcatgagaat cgctgagttt aagattactc
005581 actgacaaac taggaaaagt tacgtttgtg tagtatatta taggttttta tcaaaaaatg
005641 gctattcaga tgaatattca tgaattgtgg taggttccac cacatatagc aggataatct
005701 aaaacaaaga cagggactat cacctttgga caggtctttg tgccgccttt cccttcaatc
005761 ttcaactaat atgttttcac cctaggatag cttctaggaa taatgcgacc ttaaaatggt
005821 attctgaatt tctgattatg catttcctca agaatgctca ttagttttct caagttttct
005881 agtatgcttc cacagaggga tttgggctta gtatgacatt gggctaattg tggattttta
005941 tgagacgcag atggtgggcc tgctgtatct cattttgtta attttaaatg ctaaacttga
006001 ctgacatgtc cagatacact ggaatgctgc atatggctgt atcctgtatg tatcggacat
006061 gggaatgaca tgtattgttg attcatatct ttgtgctata cccataatat gccaaaactt
006121 atgcaaattt gacatttata ggccaatttg ttgctaaatt agtggcagtg tggcacacac
006181 tttattggcc ccatgaccca catgccatta atcaacttgc catccaaagt tatacaaaac
006241 ctatggccaa ttatatcttt gtggaacaat gctgagtata gcatgctttg taagttgtgg
006301 ttaaaggata aatttaactt aaataaatca actaatgatg tggactactg taaccacgtc
006361 acatgtgaac attgcaaaca gcaattgctg cacctggcac cttctatctt tgttttgcaa
006421 cagcacaacc acagaattcc cactcttagc ttagggtttg taattcatcc tatgtgttct
006481 gtgcgcttga ttactgatta ttatgtgcag cataatccaa cagtatgttt actatgtgca
006541 tgtcattctc ttacttaaca tgactgaaaa ccaaagcacc aaaagtcaaa ccagctattg
006601 aaatgcatct gttctggttc agtggctggg cctcaccggt gggattattt ctgttgtact
006661 gtgtgccttc acaaggagag ttccagcatt tattggtcca tgccctggac aaatgtttca
006721 tgttgcacat tggctgcatg gttcaagatt ttcatggttc atagatttca catgtaaccc
006781 agaatttgcc tgtttttacc tgtctaattg catgaacagt ccatgaagca aacagaacca
006841 ttgaggttgc caattctggt ttcctatggt cagactgctg gtctgccgtt ttttctttgt
006901 actatgctga aaaccatcaa ctgaccttta actctttctg gttaaatttc actatatcga
006961 aatgtcctaa aatcatttta atattcatat taataaccat aattatggaa attctgtcct
007021 tatgcaacaa aggtttagat tttatgttat tcttatccaa aacctatttg catcatctgt
007081 gtctgtcaag cttgtttttt taaaaaatat ttatttttct tgaaaagacc cattaaaact
007141 ttgtattgtt tgtactttgt actgaaggat aaatgactct tacgctgaga ttttgaaagg
007201 attgcgatgc tactttgata aagcattgcc tgcaatgctt ttgtataaga aagagcgaca
007261 gcagtactct gaagaggtta aaggcgatgt ttcgccctca actatatatg gagctgagca
007321 tctactgcgc ctttttggta tgtgcagttc ttgattacat gagatatcca ccaatgaatg
007381 attattcagt aaagtaagga aacaattagg aacaaggttt attgtctgtt caaaagttta
007441 cttccttcct gaatgtaaca tataaattta cttcttcaag gttttatttc atttctaaac
007501 ttattcgctt gttgaaacca attatatcag tttcactttt gaattcattg ttgtgactga
007561 gtaaaattta ttttaccctc ctcatctatt gtgttgagtc tagaaatcaa ttcttagcca
007621 tgaaacaata cggtgtacac ccctgaacta tcaaaagaac cccttaagat cagtccaatc
007681 tgatttgtac agtggttctt ttgcagagtt ggcatccaaa ttatctactt ttttgctaac
007741 atggcaccta gtttgcaagc aatgtagaaa tagttgccat gtcaaacaaa ttgttaggat
007801 tgctcttggt agtgctttaa ctggttttgg tagttgagct tgaaaatgtc caatttcata
007861 gttgagggtt gatttttagg ttagggctat agttgaagag ggtaaaatcg actattgtga
007921 cccttgtgta ttctattata gtttgaacta gagtctggat aattgttcac aagtatgaat
007981 aaattggaat ccccattagc tgaatgaaat acaaggtttt gttttaagat gaatgttttg
008041 tgtcggtagg atgttgagac agaataattt ggaaggcaaa gtacaatgtt tgaaagggtt
008101 cacttcttgc tgctttgcag tgaaattgcc ggagctactt gcgtctgtca acatggaaga
008161 agatgcactc aacaaactac agcagaaatt gctggacatt ctcaagtaag caaatctttc
008221 ttgattttat tgttgtacat cactatagca gcatattcat ttcccatcaa tatacacaaa
008281 tatgtgaagt cagttagcac cttcatttct tcatgcaatt ccagccgtta tttttcttct
008341 atatatacta gcatctctca agttagccga cttttgaaaa catgcttgaa aatctgtccc
008401 acacaattaa ttttccggtc aataccataa ttttaatcac gtgctaacca gattgtagca
008461 atccctgata gttaggcata ctttatgcca aaatgctcac taaatcaatt gggaattcat
008521 ggtaggtttc tgcagaagaa tcagagttcg ttcttccttt ctgcgtatga tggtggttct
008581 aaaggtactg atgggataaa gaccaaatag aagcaaactg ttgcatctgt atgttgactg
008641 tacttaactg tctcgctgag taattttaat tttcatgtga ttgaacaatg tgtcgatgaa
008701 catcgtagca ctgtttgcta atgctaattt catgtagtgc agcagaaggt ttcc
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
Update info.
