cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK064292     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os11g0184900 ( IRGSP 1.0 )
RAP - Chromosome No. 11
RAP - Location, Length 4,282,889 -  4,283,654  ( - );   766(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 4,282,889 -  4,283,654 ( - );   766 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 UniProt
Accession No		 UniProt Entry
Name
Os11g0184900 Os11t0184900-01 002105H07 107335 002105H07 12872 LOC_Os11g08210.1 AK064292 5229 Q53NF7 NAC71_ORYSJ


Chromosome: 11 ,  position: 4,282,889 - 4,283,654 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 cattccaaaa ctttcgaaag cttccattag cgactaatcc agccttcgtt aagggtgatt 
000061 agaatttgat taatttcaag gcctcagatc ggagattgaa tggagtgcgg tggtgcgctg 
000121 cagctgccgc cggggttcag gttccacccg acggacgacg agctggtgat gtactacctg 
000181 tgccgcaagt gcggcggcct ccccctcgcc gccccggtga tcgccgaggt ggacctctac 
000241 aagttcaacc catgggatct ccccggtaag caagagcaaa agcagatcga atcgaatcga 
000301 ggaaattgaa gtcgaattca aattcaatta attggggatt tggaattgtt gcagagaggg 
000361 cgatgggagg ggagaaggag tggtacttct tctcgccgcg ggaccggaag tacccgaacg 
000421 ggcagcggcc gaacagggcg gcggggacgg ggtactggaa ggcgacgggg gcggacaagc 
000481 cggtggggtc gccgcgggcg gtggcgatca agaaggcgct cgtcttctac gccgggaagc 
000541 cgcccaaggg cgtcaagacc aactggatca tgcacgagta ccgcctcgcc gacgtcgacc 
000601 gctccgccgc cgcccgcaag ctctccaagt cctcccacaa cgccctcagg gttagtattt 
000661 acttctttta attacttact tctcctaatc taatcatctc ttgctttcaa tcatttctcc 
000721 tcaccaacga atttaccccc attttatttt ttaaaattct acaagg

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
BY846553 bart33b03 541
more... (Total Hit Count: 27 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ927495 whchan33e11 520
more... (Total Hit Count: 10 )
/rice/oryzabase