cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK061014     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os11g0267000 ( IRGSP 1.0 )
RAP - Chromosome No. 11
RAP - Location, Length 9,220,811 -  9,222,042  ( + ) ;   1,232(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 9,220,811 -  9,222,042 ( + ) ;   1,232 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os11g0267000 Os11t0267000-02 006204B07 103402 006204B07 8352 LOC_Os11g16550.1 AK061014 41431 AP008217.2 255679674 BAF28031.1 113644890 NC_008404.2 297612483 NM_001074200.1 115485048 NP_001067668.1 115485049


Chromosome: 11 ,  position: 9,220,811 - 9,222,042 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 acaatcccct tgacagcaca gaggcaacag caaaacacac tctcatcagt gtcaggtctc 
000061 cacaccacac ccaagtacag gtacacacaa gacaatcctc ccactgaact gaatcccatc 
000121 cactccttta tcatcatcac catttccctc cttccctttt cctcccctca tttccatttc 
000181 cagttgcagc aagagctgcc tcctagctct cttcctgcca tccatggcaa atgcttccct 
000241 ccaatccttt cttcttcacc accaccattc tttccttagc aatggtatcc atgagggctc 
000301 ctccccttct ataattctca agctcacaac aaacagcaac agcagcattt cattcaagct 
000361 cttctccaac accacctcct cctcatcatc atcagtgacc accacagcat caacccccaa 
000421 ctcaccggtg acccctgctc cggtaacagc ctcgtctccg ccaccgcctt cgctggagct 
000481 cctgggcgcc cagctcgccg agagggatta ccggcaggcc gacgagacca cccgcgcgct 
000541 cctcatcgag ctcgcgggcg agccagctcg gcgccgaggg tacgtcttct tctcggaggt 
000601 gcagttcatc tccgccgatg acctccgggc catcgacgcg ctctggcagg agcacagcgg 
000661 tggccggttc gggtacagcg tgcagcggcg gctgtgggag aagtcgcggc gcgacttcac 
000721 ccgcttcttc atcagggttg ggtggatgaa gaagcttgac accgaggtgg agcagttcaa 
000781 ctacagggcc ttccctgatg agttcatctg ggagctgaat gatgacacgc cagaggggca 
000841 tctccctctc accaatgccc tcagagggac acagctcctg ggcaacatct tcacacatcc 
000901 tgcctttgaa gaggagcaag aagatgaatt agcagcagag gagaatgaca cacctgataa 
000961 cactggtcag agtaaggatg gcagcaaagg gaaggagagg ccaaagttca tgagagattt 
001021 cttcaagcct gactactcct tttgagattg gggggtaatt aaaaagcatg ggagtttgtg 
001081 atgcagagat gctggtcatg gtgcaattga tttagaaaaa aaaaaaaagg aaacatgtat 
001141 ccgtagttca tctggattgt tatgtcctgt aaacatgcgt gggaaactgc acaatatatt 
001201 atgaatataa ttgtttgaga tgtttgctct gc

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs  
Acc. No. Clone Name Length
BY838329 baet16c11 412 view details
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ726892 whvs15i20 782
more... (Total Hit Count: 2 )
/rice/oryzabase