cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK106544
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os10g0103800
(
IRGSP 1.0
)
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RAP - Chromosome No.
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10
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RAP - Location, Length
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300,799 -
307,024
( - );
6,226(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
300,799 -
301,192
( - );
394 (bp)
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Exon 2
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Location |
301,726 -
301,810
( - );
85 (bp)
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Exon 3
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Location |
301,884 -
301,939
( - );
56 (bp)
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Exon 4
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Location |
302,376 -
302,552
( - );
177 (bp)
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Exon 5
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Location |
302,654 -
302,773
( - );
120 (bp)
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Exon 6
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Location |
302,972 -
303,064
( - );
93 (bp)
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Exon 7
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Location |
303,516 -
303,636
( - );
121 (bp)
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Exon 8
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Location |
303,740 -
303,772
( - );
33 (bp)
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Exon 9
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Location |
303,969 -
304,050
( - );
82 (bp)
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Exon 10
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Location |
306,568 -
307,024
( - );
457 (bp)
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Chromosome: 10
, position: 300,799
- 307,024
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 ctctcctctc cgccattaaa cctcacaaaa ataattaaaa aaaatacccc caaactttgc
000061 aaaatttttt ctccccaaat ccacccaaaa atccttcatc cccaatcttc tcaattcgcg
000121 aattcatcct ctccagcaat cgccccccag tttttgtttt ctctttctct ctctcgattt
000181 tgtgtttctt gaggtgtttc tttgtggcct tctcgtcgcc attcttggtt ggattagggt
000241 tagggttcgt cgggatgagg gtgcacgagg aggcgtcgga agacaaggag cgggaggtgg
000301 aggaggcgcc ggacctgatg ccgctgtctc cgccgctgac cgccgccgcc actgccgccg
000361 tggttgcggt ggcggggcag cggctggtgg tgggctacgc cctgaccaag aagaaggtga
000421 agagcttcct ccagcccaag ctgctctcgc tcgccaggta acttctttag ttgtgatccc
000481 gcgtcaaatt tggaatcttt tctgtggctc tcggaggagg cgtcttcgtc ttgtgggggg
000541 atttcatgac aataaaaaga aaaatggtct attcttttta tttatttatt tatttattta
000601 ttctgaaccg aagagaagcc ctcctagtac gcttctttaa ggcctaatgg tgcttaattt
000661 cagtgcatca gatggcatgt gcatttgtga tggatccacg gtcagattgt gttttagtat
000721 tgtgaggcaa gaacagggaa gcgatttaat tagagtctaa cttgatttat cttatctgaa
000781 atgggaatgt aatcactgct gttggctgaa tctgtaagta ctgattaaat tagtgagtta
000841 gttattatta tgttgtggga gtttagtgga tagtgagagt ggctcttatg catgtgagac
000901 agatggtagc tacaattggt ctcagtatta tcttactact tctggaggga gggagggaaa
000961 ctgggaggtt ggcgtcttaa ttatatgtcc tgtactaatc actagtctca gttacgtttc
001021 tgttgtgttg ttgactgctt gtgatagctt atctccttgt caacttggaa atgttggcat
001081 ttctttaata tgcgatccgt ctatcctacg gttggtatat gggattggaa tattcttggg
001141 gataaacacc tctcaggtct ttgaaacggc ctgagggaaa aaaatcagat cattcaccaa
001201 agtataattt acttccgtga atcagcttga cctgaattta actatagtat gcacgtgttg
001261 acttgactat gcattgatac attctcttcc agcatagaat ccatgaaaat gataggttcc
001321 tgttttgtag ttgcaggctt gcagcatagg aagtgtactt ttttcctggt tggtgaacca
001381 tgactctctt cagaaaaaaa aagagagatt ttattcttct agatttactg gtagtctcct
001441 ttgatatttt ataggaagca tttattcata aatattatca gatgatttat acataaatag
001501 tctcctttgc catttaaaag gttagatttc aaggacccta caaaatgcct ttttgtctgc
001561 aatagtttta aagcatcata ttttgtttgt tgaagacttg aagtgatcaa gttttcaatg
001621 cttccaaaac acagtaaaaa attctggaat gaatttaaag tcaggtgtta gctcaaagat
001681 taaagctgtt gtcagtatta tacacaagct catgatgtgt tgtaaagaaa atagagttcg
001741 ctttaccaca acaattgatg acatccagat gtttttcccc cctacctgta gcctcttggg
001801 aacaaaaata ttagtggtgt ttgggtaaga tgtagcagta gagaagtagt gaggtgttct
001861 gacaagtgta tgcctttagt taggatggta tacttggcta catttgcgat tgaatcaaca
001921 gatcacatag taaaatatcg atattccaga atataaaatc gatacactat tttttattag
001981 atatactaaa atgcaaaatc aggggaattg ccatgtggtt ccaagccaac aaactacaaa
002041 gatgctacac tagacaatat gctgatgcca gtgataacat atacctgagt gctacattgg
002101 cattatagga tgttgttcag aacaatgggt aggggcgact acttctcaat aaaactgtgt
002161 tgatgctgtt tatttaatca ttttacagat atgttgtttc tggggtattt attctgttcc
002221 tccctttgct taataacatc atctctctta gcttcttaaa caactggttg attaatgcta
002281 ctgtctagga ggaaggtttg agagtttatg ttgctacata atttttcctt ggtattcaag
002341 ttgtattcaa tgtcttccca gaaagccaat attaaataga ggtagagtaa ataaaactaa
002401 cttttcatat ttagctggag ccgatgcgct ctatgagctt ctcatatggt cacttgctcc
002461 ggatggttag tctatttctg ggtgatctgg tcaacacttt gtgtgtggca cgtttcttac
002521 ttttgggagt gtggtttctt atatggtcct cttgattcct cctttgtaag ttttctttct
002581 tcttactgaa atgaagcaca attctcctgt gtttctgaga agaattaccg tcaattcttc
002641 aattgtgttt cataagttgt cttagtttag tttaagcatt tcctttatct ggattatatc
002701 ccgctgccca gggataacct gtgctccttt gtcaaaagta aatcctttca tcaatagtaa
002761 ctacagtacg atccaatgca tttcttagct aacacaagaa aaagcttgaa gctgcctgaa
002821 ataatcacac ctcattcctt tgaaactatt cctactattt tcttatagac tacaagctta
002881 cattgttatg aacagtacac tgtgttcgca ttaggttttt tctttatgtt aaatttttgc
002941 aagtttcctt aaactgttaa cccttttcct tcaggaagaa gagcattcat tttgtatcaa
003001 ttgatgagac tcgtcctctc tctgaacaag gcccgtttga tattatattg cacaaggtta
003061 gtcctcatgc ctctctttgc atgcatgaaa tcaaaaacag tatgccatat attagttagg
003121 ttttgttaaa caaccatatt gtgccttttg tcactgcctt aatcttatca gatatgttaa
003181 aaactttttc ctgtatatgc catgctgcct aagatataat tttttttctg attgatttcc
003241 cttttttatc agcttactga caaggagtgg cagcaagttt tggaggtagt ccttgagcac
003301 caaagcaaaa actttgattc gatcaaagaa agagtaaaca ctcttcaatt catttttgtc
003361 cttgttgacc tttttcatct tcttgaagga ttatcgtgaa gaacatccag aagtaactgt
003421 ccttgatcca cctaatgcta ttcaacattt gcacaatcgc cagtcaatgc ttcaagaagt
003481 tgctgatttg aacttatcaa atgcctatgg taagttttgc atataattat tgaatgttgg
003541 tactcatatg gtatcgaaga gattgtgtta tagtttcaat gttcttacta ttcactttag
003601 tccaagttaa tgttgtgatt taactcttgt acgcatgaga ttaccatgta gaacagtaat
003661 actgatcctt caaagaacct tcgctcacag tacaaaaata ggggataaga agagagcatt
003721 atattaatac ccacattatg taattatcca tgaaatttag tggaactgta aaaacagata
003781 agtctttgtt atattgcact gctttcctga atttgcaaag tagtttctta gcatttctaa
003841 aaatgtaaac tgcaaatctt aatactggct tatgtctgaa aattacatac ctcctctacc
003901 aagaaaaatg catagccttt tgtttgttat ttcttgtgtt caaccaatca accaatgcag
003961 gtgaggtttg cactccacga cagctggtta tcatgaaaga cccattgtct ataccatctg
004021 cagttgccaa ggctggacta acgttgccct tgggtgagtt atacaattat tctacatcca
004081 tgctcagcct taaaattaga gcacactatc tatgtcacta agtcttcttt ttgaggaata
004141 tatatagagg aattctaggt tatcaatttc caattcattt catcaaatct gttaaaaaat
004201 ggatggcaaa attctggcat gattctgatc agaatagtac tctatataca gttgccaaac
004261 cattggtagt tgatggaaca tcgaaatccc atgaactatc tcttgcatat gtggagacat
004321 ccttgtcaat gcttgatcct cctctggttc tccaggaatt tgtcaatcat ggtaacttat
004381 ttatcatgtt caattcttgt ttccaaatct tttatctgtc ctaacacttc ctcaaatgtg
004441 gatattgaag tgctgagttt tttgttgtac aggtgggatc ttatttaagg tatatgttgt
004501 tggtgaaaca atacgtgttg ttcgccgatt ttctcttcct gatgtaaaca tctatgatct
004561 ggaaaacaat gatggcatct tccgttttcc gagagtttcc tgtgctacaa atactgcaga
004621 agatgcagaa gttgaccctt ctattgctgg tgagccttct gtgttgctgt cagaccttta
004681 ttattccata ttgggtgtat agtggcatat ttccaaacct tacaaatttg ggagtttgga
004741 gtggcatgta gagaacagga aatcaatggc gtatctcagt ttgcaacttt agagtggcac
004801 atacctaatg tttcctttta gtttggtcta aactattcca agttgcttgc ttcatgggca
004861 tgataggagt cctttcgggc taataagcct gtattttagt ctgatgaata agctatctgc
004921 taaatctgtc tactaaaaat atcaactagt gcagctccct ggtggttctc cagggaaata
004981 aacaactcaa ttgttaaagt tgtttagtct gaccgaatac caactttcca attatcaaat
005041 tataaacata tttatgttac tgagcaaaat gccataaaat gacagaactt cctccaaagc
005101 cgcttctaga gaaacttggg agggagcttc ggcgcagact ggtatgagta aatcccattc
005161 atgttaacaa tatctggttt atcatttgtt atacctaact gtaaaatatt tcagggtctt
005221 agactgttta acttcgatat gattagagag catggaagaa aggatcggta ctatgtcatt
005281 gacatcaact attttcctgg tgagtcacat tcttgtgttg tgtgtggtca agtagggggt
005341 gctctgtgca gttttctaat gctctgccac catgaatgct ctactatttt ctggacagtt
005401 taccaatgat tcgattgtgt taccatagaa tatagctgtc gtttgcatac ctgctaaggg
005461 taacattgta ttaattactt ggaagattta caccgatctg tagattggat tatgttatag
005521 ccattttttg cgttgaagct aagcatagcg gtgtcagcag gtcatgctca tgcattgtac
005581 atgcatatgc ttatatctgt ggaagttcct cctgggtgga tatgtgcata cgtagagcat
005641 agagattgac atgactgcca ttgtactgag atgggcatca gtttttaact tctttttttt
005701 ttgtggggag tttttaactt catttaacat gactggaatt agttactcta ttgggtcact
005761 ttctttttgc taccagcacg tcatatatcc tcaagatcat gttatatgat tgttgtactt
005821 gaaatcctgc aggatatggg aaaatgccag gctatgagca tatattcatt gacttcctac
005881 tcagccttgt gcaaaacaag tacaagaggc gtttaagcgg gagctgaagt gtagagaata
005941 tatccagccg agagtgatac cattgacaac aaaatgccac caatgttagc tggcagctta
006001 gatagatttt ttttttcagt ttgtacaggt caaggagatg ttagctttga ggcagatgcc
006061 tgacgagcag ttcaaaaaaa aaaaaggctg cttagtgcca ggacgatatt aagaacaaac
006121 aaaaaaaggg aaagagaaaa aaggttcggt ctctccgtgc ccaacctgtg taaatcgttc
006181 actgagttcc agcctgaagc ttttcaacaa aatgatgtga ttgccc
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
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