cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK103631
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os01g0125900
(
IRGSP 1.0
)
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RAP - Chromosome No.
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1
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RAP - Location, Length
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1,420,693 -
1,426,650
( + )
;
5,958(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
1,420,693 -
1,420,897
( + )
;
205 (bp)
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Exon 2
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Location |
1,422,289 -
1,424,260
( + )
;
1,972 (bp)
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Exon 3
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Location |
1,424,338 -
1,424,472
( + )
;
135 (bp)
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Exon 4
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Location |
1,424,568 -
1,424,712
( + )
;
145 (bp)
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Exon 5
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Location |
1,424,788 -
1,424,990
( + )
;
203 (bp)
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Exon 6
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Location |
1,425,183 -
1,425,252
( + )
;
70 (bp)
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Exon 7
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Location |
1,425,356 -
1,425,495
( + )
;
140 (bp)
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Exon 8
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Location |
1,425,620 -
1,425,931
( + )
;
312 (bp)
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Exon 9
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Location |
1,426,272 -
1,426,650
( + )
;
379 (bp)
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Chromosome: 1
, position: 1,420,693
- 1,426,650
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 ggtggtctct ctctctctct cttctctcgc ctcacttcgc atcgcctcca ccaccacggt
000061 tcggctcggc tcggctactc ctctctctct ctttctctcc cctcctctca cctagggcac
000121 gcgcgccgcc gccgccgccg cctccctcct cctccccgcg cgatcccgcc gccccccgat
000181 cgaccccgcc ccccgatcgc ccgaggtcag cacgctcccc cttccctcaa ccctcctcct
000241 cctcccctcc cctccctatc ggctccgatt atctccgccg ccccgttcct cggggctcgt
000301 tgcggcggcg ccgccccccg atctctgcgc gctggtggtt ccgctgcagg tagatgcgtt
000361 cgagtttgtt tttattgtta ttattgtttg ttattattcc gtgcccttgt tttgattcgg
000421 tcgcggtgcc tgtagcaatc aatcgaggct ggattggtta atgggatcgg tggcgccgcc
000481 gattggttct gggggctgat tggatgggtg ctctgtggat tctctaagct aggttgatgt
000541 tccgtacaag ggtggtttgc ttctgctgcg ctgctagctc ttgattccgt tgcctgcaga
000601 gttttgtttt tttagttttg gccgtttttg tggtgcttat tagagagcaa tcgcgtctag
000661 gaggtcaaag gctttgtgat ttttgacgac ttgtttcctt aggaattagt attgaatagt
000721 agtaataaat aggtaatatt agcttagcag aaatcttgat acaatttcct tttgttaggt
000781 tgctgattat aatcatgggt gaattgacct ttcatcttaa aaacaatcgc tcttatatct
000841 aatcttgctg aagcgtgcag tatctatctc cttttctata ttacactgga tcatttaggt
000901 tttagtggtg ctcattaatc atgacaacac agctgttaag cggcaaatat tgctatgctg
000961 tatgatcaat gtacatgtga gctgaaatct agtgctatat cagttcatta tgatgagtca
001021 ccttgtgttt gaagttgaag tggattaatc ttggtaccgt actttatcag cagcgaagtt
001081 agatgtgtca gttattagtg cttccttctc gatctgcatc aagtaaacag ctacatgttt
001141 agagccataa gtaacggcga ggcgaataaa agatttccag agagtatagc atgtgggcaa
001201 ataagctatt aattacgcat gtagccaaac ttgttccggt tttatatatt tcagtatgtc
001261 tttttctctc tgatgattag gattatcgaa tgcaattaat gtaatatttc actttataac
001321 tgaatcccat ttttccccct ttgtatgtat tggaatcctg tatatgaagg tatgtgaaga
001381 ttgcagagag tatacagaag aagtatgcac aattggagat acttgccatc tatgataatg
001441 aaaacatagt ctttcttgga aatgaattag atatgcattc ttttctgggc tttaatgatt
001501 gttattaatt ttgttgtcta gactgttaac gttatgcttt atgattattt ttaacgcctt
001561 ctgtttctaa tctggaacat attctttgtg tttcagtaaa atatagggct tcacgattgc
001621 tgggaatcta cctgcatagc ttagttcaaa catggaaaat ctaccaaatg gctcagcaaa
001681 tatagctgag aagaaccagg ataatgagat gtctacagat gctggtgagc ctgaagaagt
001741 agcagatata tttatttata gagaagatgt tgtcagcttg aagtcaaaag aggacacccg
001801 tgggttggtt ttggaggtag caggagaata tgattctgaa ggtagcatca ctgatgatga
001861 tactgatact gaggagcatg aacacaaaag ttctcatagg actgaaaatg gtggtgctga
001921 tggtgataat gtcagtaatg gagttgatgt tgatagtcag agttcattgc ctgataacaa
001981 ggttagggtt ctatggattg atggtgtcga gaagacggaa gatattgaca gcgtggttgt
002041 catggacaga agtttccttc atggagatat agtggcttct gccacagatc caactggtca
002101 gatgggactt gttgctgatg tcagccttgt ggttgatttg caaggacctc acggagaaat
002161 aataaaggga gtatcctcta aagatttgag acgcatcagg gaatttaacg taggtgatta
002221 tgttgtctct gggccatggc ttggtcgagt cgacgaggtg ttggataatg ttaatgtgtt
002281 atttgatgac ggctccgtct gtaaagtagc cagggcagat cctatgcggc taaggccagc
002341 attggggcca ctgaatccaa atgcaagctg tcccttttat cctggacagc gtgtcaaggc
002401 agtgaattca tctgtttaca aaacatccag gtggctcaat ggactatgga aagcaagtcg
002461 tcttgaaggc actgtcacaa aggtggaaac agttgcagtt atagtctatt ggattgcatc
002521 tgcacacttt gccacgaatc aagaatctgt tcctcctgaa gagcagaacc caaaggatct
002581 gactctttta tcttgttttt catatgcaaa ttggcaatta actgattggt gtcttcctaa
002641 ccaatacaca tcatcgtgta ctgatgattc tttgattgaa agttcagaaa taaaagactc
002701 tgatgacatt cctgaatcca gtgatgttaa gacagaacta acgcagaaga ctgatatgga
002761 tgaaaaccct gggaggatgg atggagattc ttctgctgat ggatcaaata tggtttatga
002821 agataacaca tgcttagcca aacaatcaga atcaggcact attgcatcaa ccgttccaaa
002881 ggagggatca caggacaatg caacttacag gaaaaaactt aggaaagttt ttgtcaaaaa
002941 ggataaaaga acaagaagaa gagacgagag ctttgaaagg gctctgctta ttgcaaatac
003001 atacacgaag gttgatgtga tctggcaaga tgggacaaaa gaatgtggag caagctcaac
003061 attgctcatc ccgatccaca gtccaaatga ccatgaattc tttccggagc agtatgtcgt
003121 ggacaaggtt ggtaatgatg ttgatgattc ttctgaaaca aaacgtgtgg gtcttgttag
003181 aagtgttaat gcaaaggacc gaactgcatc tgtatcatgg tttaagcctt cattacaccc
003241 agaggagccc agagaaatcg agtgcaatga aattgtgagt gcatatgaat tggatggcca
003301 tccagattat gattattgct atggagatgt tgttgttcgc ttgccatctg tttcactgcc
003361 tgttgaatca accaataggg agaacaccat ggaactggat aatgtaaatt ctacagaagt
003421 atcggcaacc cctgtagctg atgcagagga acagtttcca cagaaggaat ccagtttgga
003481 atttactagc ctttcatggg ctggtaatat agttggtttt gaagacggtg atattatagt
003541 catttggggc gatggttcag tgtcaaaggt aattccttaa catctattaa tgctgaaaat
003601 agcatttagt tccaaaacta acttcatttc ctgttgtttt ttcaggttgg tccacatgaa
003661 atatatgttg ttggtcgtga agatgatggt gcctcactag atgatggaac tgccagtgat
003721 ggtgctagct gggagactgt tgatgacaat caaacggatt tgcctgatga ttctgcacag
003781 gtattatctg tctgcatcta ttgttgtttt gcccagccat tcctttcctg aagtaccttt
003841 tagtttcatt tgttgatcgc tgcattctgt ttcaggatga ttcgcaaaat gtagcagata
003901 gtaacatcga aagggaaaac ggttcattta attcgcagga tggaagctct gttgcaactg
003961 gtccactttc tgttgctttt ggctttgtga ctcggctcgc gagtgaactc tttgctcgag
004021 gtaaaaagca tttagatgga tcaaactcag atgctatgga tgaagttgaa tctcaccagt
004081 ctaatgagat ttcagaatct ggtgatgata ttgataaagc tgagggggag aacaatgtgg
004141 caacatctga gagtaccgtt gtaacaacaa atgacgcttc cggtgggaag tctgtagatg
004201 ttgatatggc tgacaagcct ggagattcag atggcttcaa acactttgat gttcagcagt
004261 gccctccaga ccatcattac ctggaaaaca tggcgcaggt aaaattttat tacatgacat
004321 gtatattatg gtgttgttaa atgtccatat attagtaaca ctcctattgc attttttgga
004381 aggaccttct tgcaagagcc gattataccc acagtttttt ttgaccattt taatattttg
004441 ttggttattt agatttcttg cttataaata gctaataaat gctgtagcag ggcactggtg
004501 gaagaaagtg ggtaaaaaag gtacagcagg aatggaacat acttgagaaa aatctaccag
004561 gtttgccatg cttcctccgg tttaacctca ttcaaatgct aataaaaaga ttgtacacaa
004621 ccatattgtg atctgactga tgttagtttt actgcaattg tagattatat ttatgttagg
004681 gtatttgagg atcgaatgga cctcataaga gccgtgatta ttggagcaag tggaacacca
004741 taccaagatg gtcttttctt cttcgacttc caccttccac ctgagtttcc acaagttcct
004801 ccggtaattg acaattacat tgccttactg tccatctttt attttcatct ttatttttct
004861 tatcatatct gctggtaatt ttttacatat gtaaatgagc tcctttcatt tgttaccaaa
004921 tctgcagtcg gcgtactatc attctggagg tttgcgcgta aatccaaacc tgtatgtgga
004981 tgggaaggtc tgcttaagtc tcttgaatac ctggacgggc agagggaatg aagtatggga
005041 tccatcatca tccagtattc tccaagtcct ggtttcactt cagggcttgg ttctaaatga
005101 aaagccttat tttaatgaag ctggctatga gaagcaagtt ggtactgttg aaggggagaa
005161 gaatgcattg ccatataatg agaacacata tctgctgagc ttgaaatcca tgttgtatat
005221 cctgaggcga cctccaatgg taacacagct cttccctctt cgagagctat ttcatttata
005281 ttattctcag atattttctc tttccaactt gagcctttgt ttatcataag ccagatacat
005341 gcatgttaga tcaacatgtc tatatcttta tgtagtttat tttggatgct aaatcctgaa
005401 tcagacattc attccattgt tcccattgca atccgtgatt cttctagcag acacagcaag
005461 aatttgcatt gccatatagt aaaactaact ctttactatg ctagtagcat aaagatgctt
005521 aactatacct tttttacaat cttttgatct tctgattgtt taatgtacta ttgatgcagc
005581 atttcgagga ctttgcaaag agccacttct ccaagcgtgg caaatacatt ctcaaagctt
005641 gtgaggccta tttgcaaggt aatggggttg ggacgctcac agatgatgcc tgcaccaccg
005701 agagaagcaa agaacagcca tgctcggtgg gtttcaaact cgcattagca aaaattatgc
005761 cacggttgat tactgccctg aaggacgctg gagcaaattg tgaccaatat gagcaccttg
005821 ggaaaacgga aactgctcaa gaacactgaa tgacttgtat ggatatcatt ttttggtttc
005881 agaaagatga tcacctcacc tgctgttttt cgtataaatg tacattacat ttgtttcttg
005941 tttctattta aacatttg
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
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