cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK241191     Link to RAP-DB ( IRGSP 1.0 / Build5 )
RAP ID Os09g0457532 ( IRGSP 1.0 / Build5 )
RAP - Chromosome No. 9
RAP - Location, Length 18,002,166 -  18,003,880  ( - );   1,715(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 18,002,166 -  18,002,288 ( - );   123 (bp)
Exon 2 Location 18,002,365 -  18,003,303 ( - );   939 (bp)
Exon 3 Location 18,003,403 -  18,003,880 ( - );   478 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No
KOME
Clone ID
KOME
Clone Name
cDNA
Accession No
Os09g0457532 Os09t0457532-01 J065120P10 300552 J065120P10 AK241191


Chromosome: 9 ,  position: 18,002,166 - 18,003,880 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 tgagttaaaa tcatctttac ttctagagga tacaaatatc atatccccag gcaggtagaa 
000061 tacatagaaa tatcggagca atgctcaacg ctttgctcag attaagaaat ctcatacaat 
000121 cataatctgg ttatttagga tataattcaa atcttattcc aggcaccaaa tagtcctgaa 
000181 aaattttctt cgcctaatag tggtgccgcc ctgcaggaac tctgagaccg ctcttttccc 
000241 aaatgcagta attgttgccg tgagcaacga catggaagtc tgacgggatt aagttgccca 
000301 cgtcataccg tgtcccaatc tttgttatga ccttatcatc gatcatggcg acatagacgt 
000361 ctccctcagc agcaaggatt ttcagcttgc tcccgggatg aatctcattt cttgatctca 
000421 ctgcagctaa tgtgctgatc tcctgcttca ggttccagtc aaatacatgg tcgtagaact 
000481 gcacacatag tcaataaaca gaatttagtc ggagaaactg gttgagaaaa ttagattttt 
000541 ctttatggca ttcgtattca tgcagctgag gactcacaat gcagggtact ccagggtgtg 
000601 tgaggatgta ggcgtagccc tgcatgacct tgtcggaggg gaacggccat gagttctgtg 
000661 tggagccagt gtcatggttg tcgatgaagg tgacggcctt ctctggcagc cagccaatca 
000721 tccccggcgc cttgccgttg ccgtccttca tccgccacag ctcaccttgc accgccgcct 
000781 gcagctcgcc cttggtcgtg aagtcgaacg ctgacgcagg gccaccgacg gcctgcgccc 
000841 agttcaccag ctcctgccgg tcaccgtcct ggttccacga cggctcaccg ttgccgtcgt 
000901 aacgcatgtt gctccatatc tcggcgacga cgaaggacgg gtcggtgttg tcgacgtacg 
000961 tcttggcgac ggccgccgag tatcccttgg cgaagtcgag gcgccagccg tcgaagccga 
001021 cgtcggactt gagccaattg agccagtcgg acagctctgt ctgcacacgc gtgttgaggt 
001081 ggtcgatgtc gggcgccgcg ccgaagtctg cgccggtgtc gcggtgaccg cggccgttgg 
001141 agtactgcgt gtcgtcgctg cagatcatgt cggggcccca gtcgaggcgg ctgtccggcg 
001201 tgccaccctc gaaaatgcag tagatgccac ggctatcctt gtaatccgcg caccggtggt 
001261 tgatgacgat gtcggcgacg cacttgatgc ctttgctgtg gaaggcggcg atcagcgacc 
001321 tgagctctgc ccccgtgccg tacttggaag cgtccaggtc gtagagccgg cccggcatgt 
001381 atccctgcgg ggcgacggag tgcgacggcg gtgggagcca gacgtgcgtg acaccggtcg 
001441 cggcgatgtc gtcgacgtgg ccatggagga agttgtacca cccgccctgc ttcttccacg 
001501 actcccagtt gaacccctac accaagaaca gtcatgtcaa acgcaagtca ttttttttta 
001561 tgtaatgtga cattgtacta caggatgctt acctggaaga ggacctgggc ttgggccaag 
001621 tgagagctca gacagagcaa ggcgataagg aggaggctgc tcattgaggc tatgcgcttt 
001681 gccattgctg cttctttcga gtagctgagt tgtgt

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
AV834958 bah20k14 603
more... (Total Hit Count: 9 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ901102 whthkles24j05 689
more... (Total Hit Count: 8 )
/rice/oryzabase