cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK105599     Link to RAP-DB ( IRGSP 1.0 / Build5 )
RAP ID Os09g0522200 ( IRGSP 1.0 / Build5 )
RAP - Chromosome No. 9
RAP - Location, Length 21,198,414 -  21,199,333  ( - );   920(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 21,198,414 -  21,199,333 ( - );   920 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No
KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
Tigr ID cDNA
Accession No
RiceXPro
FeatureNum
Genomic Nucleotide
Accession No
Genomic
Nucleotide GI
Genomic Protein
Accession No
Genomic
Protein GI
RefSeq Genomic
Nucleotide
Accession No
RefSeq Genomic
Nucleotide GI
RefSeq RNA
Nucleotide
Accession No
RefSeq RNA
Nucleotide GI
RefSeq Genomic Protein
Accession No
RefSeq Genomic
Protein GI
UniProt
Accession No
UniProt Entry
Name
Os09g0522200 Os09t0522200-01 001200A04 108448 001200A04 6588 LOC_Os09g35030.1 AK105599 7086 AP008215.2 255678666 BAF25626.1 113631945 NC_008402.2 297610002 NM_001070247.1 115480236 NP_001063712.1 115480237 Q64MA1 DRE1A_ORYSJ


Chromosome: 9 ,  position: 21,198,414 - 21,199,333 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 atcgccatta ccacactcga gcagagcaaa tacagttcag gaatcaggag caagcagaaa 
000061 cacacacaca aatccgaaga tgtgcgggat caagcaggag atgagcggcg agtcgtcggg 
000121 gtcgccgtgc agctcggcgt cggcggagcg gcagcaccag acggtgtgga cggcgccgcc 
000181 gaagaggccg gcggggcgga ccaagttcag ggagacgagg cacccggtgt tccgcggcgt 
000241 gcggcggagg ggcaatgccg ggaggtgggt gtgcgaggtg cgggtgcccg ggcggcgcgg 
000301 ctgcaggctc tggctcggca cgttcgacac cgccgagggc gcggcgcgcg cgcacgacgc 
000361 cgccatgctc gccatcaacg ccggcggcgg cggcggcggg ggagcatgct gcctcaactt 
000421 cgccgactcc gcgtggctcc tcgccgtgcc gcgctcctac cgcaccctcg ccgacgtccg 
000481 ccacgccgtc gccgaggccg tcgaggactt cttccggcgc cgcctcgccg acgacgcgct 
000541 gtccgccacg tcgtcgtcct cgacgacgcc gtccacccca cgcaccgacg acgacgagga 
000601 gtccgccgcc accgacggcg acgagtcctc ctccccggcc agcgacctgg cgttcgaact 
000661 ggacgtcctg agtgacatgg gctgggacct gtactacgcg agcttggcgc aggggatgct 
000721 catggagcca ccatcggcgg cgctcggcga cgacggtgac gccatcctcg ccgacgtccc 
000781 actctggagc tactagagct caatcaactg tacaattttg cctctttttt ctctcttttc 
000841 tggcttccga tgccaaaatt ttggtactgt acggacacta ctttcggtaa tgtgatggaa 
000901 caagttgcaa aacacagagc 

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs  
Acc. No. Clone Name Length
BY866948 rbart24a01 451 view details
/rice/oryzabase