cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK105420
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os09g0544800
(
IRGSP 1.0
)
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RAP - Chromosome No.
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9
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RAP - Location, Length
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22409977 -
22413860
( - );
3884(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
22409977 -
22410905
( - );
929 (bp)
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Exon 2
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Location |
22411169 -
22411519
( - );
351 (bp)
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Exon 3
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Location |
22412574 -
22413112
( - );
539 (bp)
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Exon 4
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Location |
22413207 -
22413323
( - );
117 (bp)
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Exon 5
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Location |
22413432 -
22413860
( - );
429 (bp)
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Chromosome: 9
, position: 22,409,977
- 22,413,860
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 atcagtgtgc ttgctctctc tcccatcgct ttcccctccc ctcgcttgcc gccgcatcca
000061 tccaccacct ctccccctcg cggatgcgat tccctcccgc cgccgccgcc gccgccgccg
000121 ccgccgcgac tagctagcta gctcggaggt cggaggggag gggtggtacg actacaatgg
000181 cgagcgcgtc ggaggacgac gccggctcgg agcggtgctg cgggagctac agcccgagcg
000241 cggacgtcag cgagtcggag acatccagcg actgctccgc gccgacgacc accaccacca
000301 cccgccgctt cgcctcctcc tcctcccgcg gcgtcgcctc ctcctcctcc tcctcgctcc
000361 tcccgacccc tcccccttcc tccgccgccg ccttcttcct ctccgccaag cccgccgccg
000421 acctctccgg tttgttcttc ctaccaaaca aactctcctc tctctgctgt ttccttgttg
000481 cgtagatctc actccacccc tcacgagatg cttcggtttg gggcttttgc tttccagagg
000541 tggacatgat gaaggagcgc ttcgccaagc tgctgctcgg cgaggacatg tccgggagcg
000601 gcaagggcgt ctgcaccgcg ctcgccatct ccaacgccat caccaacctc tccggtacgg
000661 tcatgaaccc ccacattgcc gtgatttgcg acgaggagag tggtgaataa tgttgctgct
000721 gctgttgttg ttgtttccga atccgcagcc actgtgttcg gcgagctgtg gaggctggag
000781 ccgatggctt cggcgaggaa ggcgatgtgg acgagggaga tggactggct gctctccgtg
000841 gccgactcca tcgtcgagct caccccgtca atccaggagc tccccgacgg cgggggacag
000901 ttcgaggtca tggtgccgcg cccccgcagc gacctctaca tgaacctccc ggcgctcaag
000961 aagctcgatg cgatgctcct cgccatgatt gacgggttca aggagaccga gttctggtat
001021 gtggataggg ggatcgtggt tgatgacagc ggcgggccgt tctcgtcgtc gtcatcctcc
001081 tgcgggcggc cgtcggtgcg gcaggaggag aaatggtggc tgccatgccc gcgggtgccg
001141 cccaaggggt tgtcagagga tgcgaggagg aagctgcaac aggacaggga ttgtgcgaac
001201 cagatactga aggcggccat ggcgattaac agcgatgtgc tcgcggagat ggagatcccg
001261 gaagtgtact tggagtcact gccaaaggta aacaatcatt tcagattatc tactcattgg
001321 tactactagt tactaataac tggtgctcta tactagaaaa aacaccactg gtgctggtaa
001381 aaatgggcca atgtgttaaa ttgcagtgaa caggacttct tctcaccata catgcttgta
001441 attgtagctc aactggtgaa agtgggagtg cctttatggc aatgtggtcc gttcgcttga
001501 gctagctgtg ttgctatcac actatcatct gtcttaaatc caatttattt ccattcttgt
001561 ttgtacagcc tgccattttt ttcacaagga atcaattcat gtgtagtaga gttaaagtca
001621 ctgtttttcc ttgttacaga aataagctaa ttaatgtctt tccagtgcaa ttctcatgta
001681 ttttgtgagg gggtattagc atattgcaca ctgtcttggt ttacttcttg ctgccttata
001741 tggcaagatg attttagcat ctgatctgga atcttgcaac cagtattcca ttttaatgaa
001801 aagttgaaaa cattcttacc aattatcagt ggaagctgac agttgatggc atttagaatg
001861 caaagaactt catcatataa attagcttat gatggagagt attgtaaaca ttaaacagat
001921 acctgggcga agctcaaatt cggcttcttt cttgtctgtg cttgtacacc atcacgcgca
001981 aaaataagct agtgatgcat agtattctag ttaaggcatt aatttcccaa atgtaattca
002041 tgtataggtt gctcaacctg gtcatgaata tggcatctag gcgttgactt ttaggcttgt
002101 tgtgtaatgt gctttagaag acgcaatatt gaaattccat ggcatctttt taacttttgt
002161 tctgtaattg aatataaatt atttgaactg tatctttaaa tgaatattca agtcgcttct
002221 gatatccttt actgtgtgtt tatgtgctta atgagtacct tcctaaaaga gttgttctta
002281 actggtaatg atatctctct gagttccaca catagtaacc tcttcttttt tttttctgca
002341 gagtggtaaa tcttgcttgg gtgagataat ttaccgatat ataacagctg aacaattctc
002401 accggagtgc ctcctcgatt gcttggatct gtcatcagaa caccacacac ttgaagtagc
002461 taacagaata gaggctgcca tccatgtgtg gaggttgaag ggccaaaaga aatccacgcc
002521 tcaagcaaaa tcaaagaaat cttggggtgg aaaagtgaag ggacttgttg gagatacaga
002581 aaagagtcat gttttgtccc aaagagctga tgggttgttg caaagcttaa gattgcgata
002641 ccctggtttg ccacaaacct ctctcgacat gaacaagatc cagtataaca aggttattcc
002701 tcacatttta tcttagttga atatgtcaaa caagttgggc acttgggctt agagttagca
002761 ttgtatggtt cattcacctt ctatttcatc aaaaccgagc atgctagcat gccatactaa
002821 gatctgaatt atatgaatag ttacattaga acctttctgt ttttaatatc acttaactta
002881 ttctcttcaa aaaaaatcag tttactgtca acataatcac aatattcatc tttttttctt
002941 gtgtttcttg tccaggacgt tgggcagtcc atactagaga gttactcaag ggttctggag
003001 agcttggcat ttaacataat tgccagaatt gatgatgtaa tttatgtaga tgatgcaaca
003061 aagaagtctg ccgctgctga ctctgtttcc atcttcaatc gtggcattgg cgtaccagtt
003121 cagaagagga tctccccaag cccgttctca attcagcata caccatatgc ctctccattt
003181 gctacaccca ctttctgctc ctccactcca gttacaggca gccctggaag agtacagcct
003241 ccattgaaca aagacaactt accgacaaaa caagaggtta aagttgagaa gctgttttct
003301 ggtgatatcg agaaggtctg gacgtatgcc gggaacctta gcgcaaggaa agacgcagga
003361 gatgcccctg aaagagactg aaaggcagtg aagaaagttc ttcagatctt tagacgtgtc
003421 tcagcaaggt caacaggttt caacacatcc tgttctggtc tctagctaga ttttccctgt
003481 acagaagcaa catgattcat ttttttgtgc tttcttagcg agccaagggt cgtctagccc
003541 tacttacaac aagtaaggga atgactcttt gagtcttgat cgcatctgaa caagtcatag
003601 tttcacgtag ctgcctctgt cggacatgta ctcttcttgt tcatgtttat actagctggt
003661 ttagttagca gcaagtgatt gaacttcaga tgctgcagtt cttttttttt ttttttgtcc
003721 ctggaggcat cggttcccta acaatcaact gcacttgcag tgcaatgtat catgattttc
003781 tgatgctgtt gtatatggca cctaatggac agatctgacg ctcttcagtg actctgaaga
003841 ctttcttata tcaactgtga atctgtgatc gatcacaact gctg
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相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。
更新情報
