Update info.cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
| General information | |
|---|---|
| RAP - Accession No. | AK103032 Link to RAP-DB ( IRGSP 1.0 ) |
| RAP ID | Os01g0824600 ( IRGSP 1.0 ) |
| RAP - Chromosome No. | 1 |
| RAP - Location, Length | 36,958,595 - 36,961,407 ( + ) ; 2,813(bp) |
| Exon (Data source : RAP-DB) | ||
|---|---|---|
| Exon 1 | Location | 36,958,595 - 36,958,901 ( + ) ; 307 (bp) |
| Exon 2 | Location | 36,959,378 - 36,961,407 ( + ) ; 2,030 (bp) |
| Related Rice IDs | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| RAP Locus | RAP ID | KOME Clone ID |
KOME Clone Name |
KOME Cluster ID |
MSU ID | cDNA Accession No |
RiceXPro FeatureNum |
UniProt Accession No |
UniProt Entry Name |
| Os01g0824600 | Os01t0824600-01 | 213880 | J033117C14 | 15106 | LOC_Os01g60910.1 | AK103032 | 18286 | Q0JI49 | CIPKB_ORYSJ |
| Os01g0824600 | Os01t0824600-01 | 213880 | J033117C14 | 15106 | LOC_Os01g60910.2 | AK103032 | 18286 | Q0JI49 | CIPKB_ORYSJ |
Chromosome: 1 , position: 36,958,595 - 36,961,407 bp |
|
|
Now loading |
|
|
|
| Sequence (Data source : RAP-DB) | |
|---|---|
|
Nucleotide
Fasta Format |
000001 agacggccgc gcactacctg cctgcctcct agtagtgggg gagcgcgcgg cgcgccgtcg 000061 tataacctcg cgctgagagc ggagcggaat cggaagatcc cgaggggtca agccacaaaa 000121 gttcggcgcc aaccgtgagg aagaaatctg agagcgccgg gcaggcggag cagcataaac 000181 tagaacggag gaagctcccg cggcggagag gaagcggcgt ccatttgctg tccgcgaggt 000241 cgtgcctgat cggttcagat gggttcgtct gcggttcgct gcccgtcttc gtccagttcc 000301 tgatcaggta tggtccttct cccccccgaa gagatctgct tgtcgtcaga tttcgattcc 000361 actgcgactg ggtggaattt gtgcgattta gtgtttccta ttgagtgtag gcaactgatg 000421 atctgtcaga acgtagtctc tgttaacatc aagtaggaat tcgccactac ttttattttt 000481 cagaatccaa atggggacat ttcgtcgcaa tccaatcgtt caacgtgtac tttgatcgcc 000541 gatatgtgct tcccgcattt ttaggttgat tgacagcatt agggcatccg tccgatagtc 000601 tgtctgggtt ggtgctgaag tcatataatg aaattggggg tgacatacct gtgatgtttg 000661 ccggtggctc ttataacagt actaaattac cgtgtagcat ttgagatttt aacatccatt 000721 tggatttgga ttacatttcc tgtgtaggtg tactaaaatt cagtttgttc tttctaatga 000781 cagctcttaa caggcagagg acttgggaat gcagaaagat gtgcttgcac gacaggaagt 000841 taatatttcg tgcaaacaag atcccagctt ggatcaagcc gatgttgctg gaccttcatg 000901 tgaatgtgct gcatagtgat accgtgctgc ttttccgtgt tttgaagcat agtagattga 000961 aggactccaa gtttgttgat catcacattg acgacgacgg ataacatctg ctgcattcat 001021 tacctatact ttgtagatac ttctatagaa gtggtgtggt ggtgtttgct cattttgttg 001081 tgttccaata acttgatatg atggatggga ggtcaatctt gatgggccgt tatgaggttg 001141 ggaagcaatt aggacaagga acatttgcaa aggtgtatta tgcacgaaat cttactaccg 001201 gccaagctgt tgccataaag atgatcaaca aggataaggt catgaaagtt gggctaatgg 001261 agcaaataaa gagggagatt tcaattatga gattggtgaa acatccaaat gttcttcagt 001321 tatttgaggt tatggctagc aagagcaaga tttattttgt tctggagtat gctaaaggtg 001381 gtgagctttt caacaaaatt gctaaggagg gaaagctcag tgaggattct gcgaggagat 001441 atttccacca attgatcaat gcagttgact attgccatag tcgaggtgtt tatcatcgtg 001501 acttaaagcc tgaaaatctg ctcctggatg agaatgaaaa ccttaaagtc tcagattttg 001561 gtttaagtgc cctggctgag tccaagaggc aagatggtct cctgcatact acatgtggaa 001621 ctccagctta tgttgctcct gaagttctta gcaggaaagg ctatgatggt gcaaaggcag 001681 atgtatggtc ttgtggagta attttgtttg tgcttgtggc tggttacctt cctttccatg 001741 atccaaattt gatagagatg tacagaaaga tttgcagagc agacttcaga tgccctcgtt 001801 acttttctgc tgagctgaag gatcttatac ataaaatcct tgattcagat ccaagtacta 001861 ggatttctat cccaaggata aagagaagta cttggtacag aaaaccagtt gaaataaatg 001921 ctaaaaacag tgaggcagcc acaacaaaca gcatctcttc aggtgtagct acaacctcag 001981 gttctgcaga gtgcagcact tctgaggaaa atcaagggtc cttaagcctc ccaaacctga 002041 atgcatttga cataatttct ctctcaacag ggtttaatct atctgggttt tttgaggata 002101 cgcatggtca ccaggaagaa cggtttacca ctaggcagcc tgtgacaaca gtacttggaa 002161 agctgaagga attggccaaa cgcctgaaac taaaagttaa gaagaaggat aatggagttt 002221 tgagattggc agcaccaaag gaaggaaaga agggctttct tgaacttgat gcagagattt 002281 ttgaggtcac cccttcattc ctcttagttg agttgaaaaa gaccaacggg gatactatgg 002341 agtatcgaaa gctggtcaaa gaagatataa ggccagcact caaggatatt gtttgggtgt 002401 ggcaaggtga tgagcacctg aactcacaat ctatcctgca aggagagcag cagcagtccc 002461 cattgccacc agagctacca caggatcagt tgcaaccatc attgccacaa caggagaagc 002521 aggacatgcc tgaaccaccg ttgttgccac aagtaccaca agaagaagtg caaacatcta 002581 tccccgcaga acaaacaaag aattagtttt aacagccaac tggtaattca aatgttcttg 002641 tcatccatgt ttgtatcctt cttttatgtc tttgctgctt gtttctaatt cctctggaat 002701 tgcaaagctg tacctgtttg tacagaagtg caatgcactt caattttgga aactacaaag 002761 gaacacctcc gagtgttact cctgaatttt cgaaagagaa acaatcattg atg |
Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
| Hit Barley ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| AK249042 | FLbaf18f02 | 2163 |
| more... (Total Hit Count: 2 ) | ||
| Hit Wheat ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| CJ667943 | whkv13b12 | 759 |
| more... (Total Hit Count: 2 ) | ||
