cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK072867
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os09g0507200
(
IRGSP 1.0
)
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RAP - Chromosome No.
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9
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RAP - Location, Length
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20,359,390 -
20,365,766
( + )
;
6,377(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
20,359,390 -
20,359,683
( + )
;
294 (bp)
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Exon 2
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Location |
20,362,290 -
20,362,368
( + )
;
79 (bp)
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Exon 3
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Location |
20,363,013 -
20,363,083
( + )
;
71 (bp)
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Exon 4
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Location |
20,363,661 -
20,363,760
( + )
;
100 (bp)
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Exon 5
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Location |
20,363,832 -
20,363,873
( + )
;
42 (bp)
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Exon 6
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Location |
20,363,968 -
20,364,009
( + )
;
42 (bp)
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Exon 7
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Location |
20,364,705 -
20,364,868
( + )
;
164 (bp)
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Exon 8
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Location |
20,365,358 -
20,365,766
( + )
;
409 (bp)
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Chromosome: 9
, position: 20,359,390
- 20,365,766
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 agctttcccc tctctttcgc ttcgcgagat tggttgattc atctcgcgat tgatcgagct
000061 cgagcggcgg tgaggtgagg tggaggagga ggaggaggag gagatcggga tggggagagg
000121 gagggtggag ctgaagagga tcgagaacaa gatcaacagg caggtgacgt tcgcgaagcg
000181 gaggaatggg ctgctcaaga aggcgtacga gctctccgtg ctctgcgacg ccgaggtcgc
000241 cctcatcatc ttctccaacc gcggcaagct ctacgagttc tgcagcggcc aaaggtatat
000301 atacatggac gcactgggcg cgcgcctcga tctgctatag ctagatcggt agctgcttgc
000361 aacgtagcta gctagggttt cttgcgcgcg cctgcgcctc cagatctgga gcgcacgatg
000421 gttttgtgaa cttcttggtg gcgattttgc ggggatctgg ggctgcacat ggtggatctg
000481 cgagtgtgct cgtgttttgg tgagttttgg gagggtttgg gagaaggaag ttggtggaat
000541 tctgtgggaa taattagggt ttttgttcgt tcgatcgggt gctagctagc gtaataggga
000601 gtggtgaaat acgtagatct gagggtttct gatcccgtgg tagtagtggt tttgagatgg
000661 cgcgcttaat ggttttgagt ttggtttaat tgcgattaat ttatgtgcat gcatgggatg
000721 ggacattcag gatttaagcc tggatcagca agtcgatttt tacggagaaa attaatcgtt
000781 ggaagcttcg aatcttaatt ttatcgatct cctaatggag ggtatgcgag tttcgaattc
000841 ccttgggatc tgtttttttc ctcaattttt agttttttga ggggcaattt tttttagggt
000901 atatatgatt tttttttttt gggggggggg ggtgtgtgaa gggatcatgc atatcattag
000961 ccatgtaccg gatgtgtgtc taaacaaacg ttcactgcat gaattccacg gtttggaggc
001021 agcatacctt acaagatttg ggggtttcac ttaagatttt gtctctttgt ttttttaagg
001081 gatggccgcg ggggagtatt gtttttcaag tgagttatgg ttgcatcatt aaaggcaaca
001141 tcaataaata taaagtctgt ttctcctgag ataagtatat gaaaaatcat atactactat
001201 atatataatt gtctttcaga aacacagagc gtctgattgg ctaggcataa ttcacaagcc
001261 gcatataagc tagttgaatt gattttgaat tagaaaacat tttttttcgg ggggaagaaa
001321 acatttggta ttgtgtttag agataaacaa ttagttaggg tagataagtc aggcattcat
001381 gagcttcatt tcatatttga atcatacatt ttccaaactt tagaaggtta aattttcttg
001441 ctcattgtat tgcactgatc attttaataa tatcttctat agtgaatatt acatcattat
001501 atattttaga taatgattac attattatat gctccgttgc agaaaaaacc aacttttttg
001561 ccaaacctgg acatatatag gctatgtcca gatttatagc tagaagttag ggcctcatct
001621 tttaccctat gaattataag ccaatatcaa attttgaatt tcgaaacttg atttagaagt
001681 tgatttttaa tgttttgtca atgtagattg tttttcagca ttaactttta attcgctaaa
001741 gacacatata caattttact cacaaattat attttggttg ctaataagcc gttatggctt
001801 ataatcagcc gtaagtatat ggggacttta gcattctttt tcttttttta tggagggagt
001861 acatgcttgc caatttttat agttatgttt aaatggtttc cattatacct aagttactaa
001921 attaaaatta atacgcctat aaaattctaa cattaaatat attcacaaat aagagtacat
001981 gatttcattg accagggaat tcaatttgga tatggggtga gtgaaacatc cctcctctgc
002041 tcctcggaag aaatcctgca agggagtaca caatattcct aggactcact tgagtatctg
002101 cagggtacag ttagtgacag ctttcgattg tcattcgatt ggtctcctca gctctcgtag
002161 ctgagctgtc agtacagaag attggtcttc atcagatgtc tcttctagtt ctagctagag
002221 ctagttcagt ggagtatttt atgccgacaa attgatactc aacgtgtact gtagatcctt
002281 ttcagaaatc tgaattcacg acttgtttaa acaaaggctg tgtttggatc caaacttcag
002341 tccttttcca ttacatcaac ctgtcatata cacacaacat tttagtcata tcatctccaa
002401 tttcaaccaa aatctaaact ttgcgttgaa ctaaacacag ccaaaaggtc actaaattga
002461 cgcggtagag gggggggggt gagcattata gctgtagtag tagtctgcgt gaagttatgc
002521 catttcattg tgtgtcgtct gaacttgata tctctcttta aagagtgtac tccattttct
002581 ttacaaaaag tggcctctag gttgatatca tggacatata taaaattata aatcaacttg
002641 aaactaccga tgcaagaatt aagataaaac gttattgttt cttagaaatt gtctccaatt
002701 atgcaagcac cttcatccgt gtcatggagc taatgttcat gttttgtgag aaacaagatt
002761 tttcatctac taattaatcg atgtggtccc cggaaaagaa tgtgccctag attgttagta
002821 tttagttatg ggcgaactat atatgttcct ttatttcgtt tttccataaa catagccatt
002881 tgtgtttttg aaacttgcag catgaccaga actttggaaa gataccaaaa attcagttat
002941 ggtgggccag atactgcaat acagaacaag gaaaatgagg ttactagatt ctattaatat
003001 attttaattt ttagtgagtt atgacaagct tttatggatt taagttgatg catagactag
003061 ctttgtgttc tgattaatcg atctgtgtct cactggataa tacttcaaca attcgattca
003121 tgcagtttaa ttgattgatc ctagatatgc tgcttttagt attatcatta attaccaact
003181 atatacacgt gttgaatagt acaattaaaa atgaagtctt aatttaatat attcgctgtg
003241 cttcttaatg tatgtgatgt tgctacaaga ctcaaaattt aatgaaaaat gagagcactg
003301 caaaaggttg catatgaaag agtgctataa ctagaatgag tattgttgtt gtgtttccac
003361 atgtaataac actgatttac aactctaatt tgtgctagct gaaatgtcta gtatgtagat
003421 ctgaatataa aacagaaaag ctcctagtca ctggttattg accatgatat gatagatgga
003481 ttcatgaatt aatatcactg ttttctaata aattgttcat tcataagcct aattttgcat
003541 gtgaaattat attattttgt tttcacatag aatctctaaa ttgtttccta tttctttgta
003601 ctgaagttaa atttattttt cagttagtgc aaagcagccg caatgagtac ctcaaactga
003661 aggcacgggt ggaaaattta cagaggaccc aaaggtaata tcaggcttcc acttatgagt
003721 tcaattttat caaagacgaa atggagcaca gttaattggt ttcattcata tatatgcaaa
003781 gtagataaat tattgtgtat tggggcaaga acaattatgt gtacactaga tactttttgg
003841 ccatttgggt gaaaaaaaaa actatattgc atggaaaaaa cacatatgac tagtgttaac
003901 aagagtgaag taatatatgt gaaccaatga aggtcctacc gccgtctcta ttatataggg
003961 tttacaagtg gtaaaacagt aatctcaggg agaactagct tagagaatta gatgcgtgca
004021 gtagtatata ctgaagttgc ttagagaatt agatgcatgc atcaatcaca gtgtaaaata
004081 tacagaacta aggccccgtt tagattccaa cttttttttc aaacttttaa ctttttcgtc
004141 acatcgaatt ttcctacaca cacaaacttc caactttttt gttcacatcg ttccaatttc
004201 ttcaaacttt caattttagt gtggaactaa atacagccta acttagtaga tctttctgtt
004261 gacaattaca ggaatcttct tggtgaagat cttgggacac ttggcataaa agagctagag
004321 cagcttgaga aacaacttga ttcatccttg aggcacatta gatccacaag ggtaatttgt
004381 taactgtttc tcacatatgt ttcagaaatg ttgaaaaaaa tttaactcta atcttgttgc
004441 agacacagca tatgcttgat cagctcactg atctccagag gagggtacaa gcttgacata
004501 aaacttacca actatgtatt tcaggcaaga aaatttatta tttccaaaac taactttata
004561 tacctaaatc attttcagga acaaatgttg tgtgaagcaa ataagtgcct cagaagaaaa
004621 gtaagtttaa ttccttgtcc cgtttaagtt tcatgcattt acttgatctt aagattctgc
004681 atgaactaag tatgtggttt taaaagtaat ttatacactt cacttttatg tgtgcttgtt
004741 caaaatcaaa gccccgcatc catgtagtac taaatttaat ctgatcagga attcaatgtg
004801 tagatgttaa catcagtgtt tagttagcac tttatatatt ccttccacat aaacttacaa
004861 acatgtgaac atataaaata tggtttgtaa gggcgtataa cagaaactgg acaagtttgt
004921 gtacgttgat gcatattagt ttgtaggatg aattgtatat attacaaaag aacatttggt
004981 attggttatt tctacataac gaatacgtac atgaagcttc gtagacagca tattacttca
005041 actgcgcata ttaattaaca taaggatctc tcacacgtaa gcaatgcata ttaacaattg
005101 atcaagacga ggtcacactg ttttcggttg cgatttaggc atttaggtcc gttttcctgg
005161 catctcttcc tcggatatat atatatctcc tggctaacgc ctgcttacgt agctctgtga
005221 aataaccaaa atgatgctgt gaaatgaaaa aaaaaaacac aagtgagaaa agaataacga
005281 gcactactaa tgtttgattc gtttgcgagg aaaagctgga ggagagcaac cagttgcatg
005341 gacaagtgtg ggagcacggc gccaccctac tcggctacga gcggcagtcg cctcatgccg
005401 tccagcaggt gccaccgcac ggtggcaacg gattcttcca ttccctggaa gctgccgccg
005461 agcccacctt gcagatcggg tataaaatgc atgttactca tttcagcttc atgatcgttt
005521 ctctgatctc attagttctt gaaaccaatt gtgtatccag tttaattttt tcattattac
005581 gggaaaagct tgcacgtaca catatatacc actacacacg cgcgtacacc cactcacgca
005641 tacatccgtg agtaagcttt tttaacacat gcttaagaga tatgaatggt gtttttctag
005701 ccttactaga ttactaagga ggtccactca atcgtgcgta tctattttat tctgtgctaa
005761 aaaaaggtat ggaatgctct ctacacatga acttgggccg agtttagttc caaaattttt
005821 cttcaaactt tcaacttttc tatcacatta aaacttttct acacatataa actttcaact
005881 tttctgtcac atcgttccaa tttcaaccaa acttctaatt ttggcgtgaa ctaaacacac
005941 ccttaacaca atttgattct cttcgtaggt ttactccaga gcagatgaac aactcatgcg
006001 tgactgcctt catgccgaca tggctaccct gaactcctga aggccgatgc gacaaccaat
006061 aaaaacggat gtgacgacac agatcaagtc gcaccattag attgatcttc tcctacaaga
006121 gtgagactag taattccgtg tttgtgtgct agcgtgttga aacttttctg atgtgatgca
006181 cgcactttta attattatta agcgttcaag gactagtatg tggtataaaa ggccgtacgt
006241 gacagcctat ggttatatgc tgcacaaaaa ctacgtatgg tacagtgcag tgcctgtaca
006301 tttcataatt tgcggtaaag tttattgact atatatccag tgtgtcaaat ataataaaat
006361 gtcgaggttt aattacc
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
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