cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK072749     Link to RAP-DB ( IRGSP 1.0 / Build5 )
RAP ID Os09g0286600 ( IRGSP 1.0 / Build5 )
RAP - Chromosome No. 9
RAP - Location, Length 7,006,158 -  7,007,789  ( - );   1,632(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 7,006,158 -  7,006,432 ( - );   275 (bp)
Exon 2 Location 7,006,934 -  7,007,789 ( - );   856 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
Tigr ID cDNA
Accession No
RiceXPro
FeatureNum
Os09g0286600 Os09t0286600-01 208801 J023139A06 657 LOC_Os09g11460.1 AK072749 11958
Os09g0286600 Os09t0286600-01 208801 J023139A06 657 LOC_Os09g11460.2 AK072749 11958


Chromosome: 9 ,  position: 7,006,158 - 7,007,789 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 accatgactg caaaatttcc aagtttctcg ctagtttaaa tgcacgccgc tagcttagct 
000061 actctcttcc acccacaacc cccaagcatc agcatcacaa cccaccaatc gaatcgatcg 
000121 aacaagacac gacaccatgc gccgccgcgt ctcctcctcc tcctcctcct cctcgtcctc 
000181 gtcgccggcg aggcatcaca aggcgcggcg cagcaggagg aagctcgccg tcgacgagga 
000241 ctgggaggcc gccttccgcg agttcctctc ccgcgaccac gacgacgacg acgacgacca 
000301 cgacggtcag catgtcgttg ttgcgccgtt gatccgtggt agtgacaagt gcgtccacgg 
000361 ccacgaggtg gtggcgtcga cggtcggcgg tggcgcaagc ggcggacgac gacgagccga 
000421 cgacgacgac ggcgagcggc ggcggcggcg gcggagggag aagcggagct acccgtaccg 
000481 cggcatccgg cagcggccgt gggggaggtg ggcgtcggag atccgcgacc ccgtcaaggg 
000541 catccgcgtc tggctcggca ccttcgacac cgccgagggc gccgcgcgcg cctacgacga 
000601 cgaggttcgc cgcatctacg gcggcaacgc caagaccaac ttccccccat cgccgcccac 
000661 gccgccgccg ccggagaagc cagcggcgga gaggagcccc tcgacgacgc cgacgacgac 
000721 cacggaggac tccggcgact cgcgcatact catcgagtgc tgctccgacg acctgatgga 
000781 cagcctcctc gccgccttcg acatgaccac cggcgacatg cgcttctgga gctaacgaac 
000841 aacagagcag attcaggtaa ttaaatccac acccaagcag gtctaaaagt ttttaacaat 
000901 ttcatgaaac aaaattaaca acaaatccag taagataaat aggatttaac aaggattgca 
000961 atggtaatta ttgcacaatt ttaccatttc ggtgctttca actgttcaat caccgaaaga 
001021 aattcagcaa cttttgaagg gcactgctac gcgtacttaa tttctttttt tcttctacaa 
001081 aacactttct aaacaagttc tcgaatgttc catttaatta gatgggagta aaaaagaaat 
001141 ccagaattag ttatagcatg tggcattagc catgaaagtt ttagtaaaaa aaatttgcac 
001201 ttttgaatga tctagatcat agaggatcag tcgaattctg tgtgttcatg ccatttctag 
001261 catttacgtg cagtattaaa taaagttact actatttttt tcttgttttc tctatgttac 
001321 tcatcatgat tttacatttt tctttccctt ttgacaggac aacataaacg gcacgtcttt 
001381 gcaaccttga catgcgactc gcctaataat cttgtcaaac aagggccgcc agcttaatta 
001441 gctttttcca aaggtgggga acaattttgg gggatgcaat taggacgcac agagatgacc 
001501 ccaacttgtc aatgggaatt gaactctgat gacctttgta atgataatca aggcaccaca 
001561 ttgtggggtt aagcaaagtt ttggcaaatt agctttgcct tgcaggaata aatcagcatt 
001621 tctttttttt tc

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
AK248243 FLbaf2j07 1472
more... (Total Hit Count: 2 )
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