cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK102887     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os01g0850900 ( IRGSP 1.0 )
RAP - Chromosome No. 1
RAP - Location, Length 38,369,308 -  38,370,234  ( + ) ;   927(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 38,369,308 -  38,370,234 ( + ) ;   927 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os01g0850900 Os01t0850900-01 213735 J033112K22 12507 LOC_Os01g63210.1 AK102887 2353 AP008207.2 255672756 BAF06731.1 113534348 NC_008394.4 297598437 NM_001051352.1 115441074 NP_001044817.1 115441075


Chromosome: 1 ,  position: 38,369,308 - 38,370,234 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 aatcactcat ccaagtatcc aacaaagaac aaacccaccc ccgccgctga gatcgaatcc 
000061 gaccttaatt ttcacctgct cgctgatctc gccggccgtc gaccgccatg gggatggtgc 
000121 tgggcaagat cacggtggag acgcccaagc acgaggtgct ccacaccggc gccggctacg 
000181 aggtccgcaa gtacccgccg tgcgtcgtcg ccgaggtcac ctacgacccc gcggagatga 
000241 aaggcgaccg cgacggcggg ttcaccgtcc tcggcaacta catcggcgcc ctcggcaacc 
000301 cgcagaacac caagccagag aagatcgaca tgaccgcgcc ggtcatcacc tccggcgagc 
000361 ccgagagtat cgccatgacg gccccggtca tcacctccgg tgagcctgag ccggtggcga 
000421 tgaccgcgcc ggtgatcacg gccgaagagc gcagccaggg gaagggtcag atgacaatgc 
000481 agtttctgct gccgtccaag tacagcaagg tggaggaggc gccgcggccg acggacgagc 
000541 gggtggtgct gcggcaggtg ggggagagga agtacggggt ggtgaggttc agcggcctga 
000601 ccggagacaa ggtggtgaag gagaaggcgg agtggctcaa ggccgcgctg gagaaggacg 
000661 ggttcaccgt caagggcccc ttcgtgctgg cgcggtacaa cccgccgttt actctgcctc 
000721 cgctgcgcac caacgaggtc atggtccccg tcgagtgata cggcgagact ccattgttgg 
000781 tgtctagtga tgtactgatg cgcatgtact tttatcaggg tgtccttgtt actcctaggc 
000841 cctagctatt tctctatttc tttatccttt tgactttgtt ctgtactgat gtatgtttgg 
000901 atcaacgaat aatggacata tcttggg

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
AV936380 rbaal11b24 650
more... (Total Hit Count: 16 )
Hit Wheat ESTs
Acc. No. Clone Name Length
BJ230452 rwhdl22m01 566
more... (Total Hit Count: 6 )
/rice/oryzabase